Non-mitochondrial complex I proteins in a hydrogenosomal oxidoreductase complex

Nature

Volumn 431, Issue 7012, 2004, Pages 1103-1107

  Dyall, Sabrina D ^a,b   Yan, Weihong ^a   Delgadillo Correa, Maria G ^a   Lunceford, Adam ^a   Loo, Joseph A ^c   Clarke, Catherine F ^a   Johnson, Patricia J ^a,b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b NASA HEADQUARTERS   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CATALYSIS; GENES; METABOLISM; OXIDATION; PLANTS (BOTANY);

HYDROGENOSOMES; MITOCHONDRIA; OXIDATIVE PHSOPHORYLATION; PYRUVATE OXIDATION; QUINONES;

ENZYMES;

ADENOSINE TRIPHOSPHATE; HYDROGEN; HYDROGENASE; OXIDOREDUCTASE; PROTEIN; PROTEIN NDH24; PROTEIN NDH51; PYRUVATE SYNTHASE; PYRUVIC ACID; QUINONE DERIVATIVE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE DEHYDROGENASE; UNCLASSIFIED DRUG; IRON HYDROGENASE; IRON SULFUR PROTEIN; MITOCHONDRIAL PROTEIN; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE DEHYDROGENASE (UBIQUINONE);

BIOLOGY;

ARTICLE; CELL ORGANELLE; COMPLEX FORMATION; ELECTRON TRANSPORT; ENDOSYMBIOSIS; EUBACTERIUM; EUKARYOTE; GENETIC ANALYSIS; GENOME; GRAM NEGATIVE BACTERIUM; METABOLISM; MITOCHONDRION; NONHUMAN; OXIDATION; OXIDATIVE PHOSPHORYLATION; PHYLOGENY; PRIORITY JOURNAL; PROTEIN PROTEIN INTERACTION; TRICHOMONAS VAGINALIS; AMINO ACID SEQUENCE; ANIMAL; BIOLOGICAL MODEL; CARBOHYDRATE METABOLISM; CHEMISTRY; CYTOLOGY; ENZYMOLOGY; EVOLUTION; FERMENTATION; MOLECULAR GENETICS; OXIDATION REDUCTION REACTION; PHOSPHORYLATION; PROTEIN BINDING; SYMBIOSIS;

ARCHEZOA; BACTERIA (MICROORGANISMS); EUKARYOTA; NEGIBACTERIA; PROTEOBACTERIA; PROTOZOA; TRICHOMONAS VAGINALIS;

ADENOSINE TRIPHOSPHATE; AMINO ACID SEQUENCE; ANIMALS; CARBOHYDRATE METABOLISM; ELECTRON TRANSPORT COMPLEX I; EVOLUTION; FERMENTATION; HYDROGEN; HYDROGENASE; IRON-SULFUR PROTEINS; KETONE OXIDOREDUCTASES; MITOCHONDRIAL PROTEINS; MODELS, BIOLOGICAL; MOLECULAR SEQUENCE DATA; NADH DEHYDROGENASE; ORGANELLES; OXIDATION-REDUCTION; PHOSPHORYLATION; PHYLOGENY; PROTEIN BINDING; PYRUVATE SYNTHASE; PYRUVIC ACID; SYMBIOSIS; TRICHOMONAS VAGINALIS;

EID: 7744240435     PISSN: 00280836     EISSN: None     Source Type: Journal    
DOI: 10.1038/nature02990     Document Type: Article

References (30)

1. Müller, M. The hydrogenosome. J. Gen. Microbiol. 139, 2879-2889 (1993).
2. Horner, D. S., Hirt, R. P. & Embley, T. M. A single eubacterial origin of eukaryotic pyruvate: ferredoxin oxidoreductase genes: implications for the evolution of anaerobic eukaryotes. Mol. Biol. Evol. 16, 1280-1291 (1999).
3. Horner, D. S., Foster. P. G. & Embley, T. M. Iron hydrogenases and the evolution of anaerobic eukaryotes. Mol. Biol. Evol. 17, 1695-1709 (2000).
4. Embley, T. M., van der Giezen, M., Horner, D. S., Dyal, P. L. & Foster, P. Mitochondria and hydrogenosomes are two forms of the same fundamental organelle. Phil. Trans. R. Soc. Lond. B 358, 191-201 (2003).
5. Gray, M. W., Burger, G. & Lang, B. F. Mitochondrial evolution. Science 283, 1475-1481 (1999).
6. Clemens, D. L. & Johnson, P. J. Failure to detect DNA in hydrogenosomes of Trichomonas vaginalis by nick translation and immunomicroscopy. Mol. Biochem. Parasitol. 106, 307-313 (2000).
7. Dyall, S. D., Brown, M. T. & Johnson, P. I. Ancient invasions: from endosymbionts to organelles. Science 304, 253-257 (2004).
8. Bui, E. T. N., Bradley, P. J. & Johnson, P. J. A common evolutionary origin for mitochondria and hydrogenosomes. Proc. Natl Acad. Sci. USA 93, 9651-9656 (1996).
9. Horner, D. S., Hirt, R. P., Kilvington, S., Lloyd, D. & Embley, T. M. Molecular data suggest an early acquisition of the mitochondrion endosymbiont. Proc. R. Soc. Lond. B 263, 1053-1059 (1996).
10. Roger, A. J., Clark, C. G. & Doolittie, W. F. A possible mitochondrial gene in the early-branching amitochondriate protist Trichomonas vaginalis, Proc. Natl Acad. Sci. USA 93, 14618-14622 (1996),
11. Dyall, S. D. et al. Presence of a member of the mitochondrial carrier family in hydrogenosomes: conservation of membrane-targeting pathways between hydrogenosomes and mitochondria. Mol. Cell. Biol. 20, 2488-2497 (2000).
12. Friedrich, T. & Bottcher, B. The gross structure of the respiratory complex I: a Lego System. Biochim. Biophys. Acta 1608, 1-9 (2004).
13. Fearnley, I. M. & Walker, J. E. Conservation of sequences of subunits of mitochondrial complex I and their relationships with other proteins. Biochim. Biophys. Acta 1140, 105-134 (1992).
14. Yano, T., Sled, V. D., Ohnishi, T. & Yagi, T. Identification of amino acid residues associated with the [2Fe-2S] cluster of the 25kDa (NQO2) subunit of the pro ton-translocating NADH-quinone oxidoreductase of Paracoccus denitrificans. FEBS Lett 354, 160-164 (1994).
15. Yano, T., Sled, V. D., Ohnishi, T. & Yagi, T. Expression and characterization of the flavoprotein subcomplex composed of 50-kDa (NQO1) and 25-kDa (NQO2) subunits of the protontranslocating NADH-quinone oxidoreductase of Paracoccus denitrificans. J. Biol. Chem. 271, 5907-5913 (1996).
16. Hrdy, I. & Müller, M. Primary structure of the hydrogenosomal malic enzyme of Trichomonas vaginalis and its relationship to homologous enzymes. J. Eukaryot. Microbiol. 2, 593-603 (1995).
17. Hrdy, I. & Müller, M. Primary structure and eubacterial relationships of the pyruvate:ferredoxin oxidoreductase of the amitochondriate eukaryote Trichomonas vaginalis. J. Mol. Evol. 41, 388-396 (1995).
18. Dolezal, P., Vanacova, S., Tachezy, J. & Hrdy, I. Malic enzymes of Trichomonas vaginalis: two enzyme families, two distinct origins. Gene 329, 81-92 (2004).
19. Jonassen, T., Davis, D. E., Larsen, P. L. & Clarke, C. F. Reproductive fitness and quinone content of Caenorhabditis elegans elk-1 mutants fed coenzyme Q isoforms of varying length. J. Biol. Chem. 278, 51735-51742 (2003).
20. Meganathan, R. Ubiquinone biosynthesis in microorganisms. FEMS Microbiol. Lett. 203, 131-139 (2001).
21. Massanz, C., Schmidt, S. & Friedrich, B. Subforms and in vitro reconstitution of the NAD-reducing hydrogenase of Akaligenes eutrophus. J. Bacteriol. 180, 1023-1029 (1998).
22. Land, K. M. et al. Targeted gene replacement of a ferredoxin gene in Trichomonas vaginalis does not lead to metronidazole resistance. Mol. Microbiol. 51, 115-122 (2004).
23. Friedrich, T. & Scheide, D. The respiratory complex I of bacteria, archaea and eukarya and its module common with membrane-bound multisubunit hydrogenases. FEBS Lett. 479, 1-5 (2000).
24. Lang, B. F. et al. An ancestral mitochondrial DNA resembling a eubacterial genome in miniature. Nature 387, 493-497 (1997).
25. Andersson, S. G. et al. The genome sequence of Rickettsia prowazekii and the origin of mitochondria. Nature 396, 133-140 (1998).
26. Akhmanova, A, et al. A hydrogenosome with a genome. Nature 396, 527-528 (1998).
27. Doolittle, W. F. et al. How big is the iceberg of which organellar genes in nuclear genomes are but the tip? Phil. Trans. R. Soc. Lond. B 358, 39-57 (2003).
28. Martin, W. & Müller, M. The hydrogen hypothesis for the first eukaryote. Nature 392, 37-11 (1998).
29. Doolittle, W. F. You are what you eat: a gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes. Trends Genet. 14, 307-311 (1998).
30. Huelsenbeck, J. P. & Ronquist, F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinfarmatics 17, 754-755 (2001).