Thermo-mechanical stability and strength of peptide nanostructures from molecular dynamics: Self-assembled cyclic peptide nanotubes

Nanotechnology

Volumn 21, Issue 11, 2010, Pages

  Carvajal Diaz, Jennifer A ^a   Çaǧin, Tahir ^a  

^a Texas AandM University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANISOTROPIC ELASTIC CONSTANTS; BIONANOTECHNOLOGY; DESIGN AND DEVELOPMENT; FINITE ELASTICITY; HEAT CAPACITIES; HOMOGENEOUS DEFORMATION; ISOTHERMAL COMPRESSIBILITY; MEMBRANE MODELS; MOLECULAR DYNAMICS SIMULATIONS; SECOND ORDERS; SELF-ASSEMBLED CYCLIC PEPTIDES; STRAIN VALUES; TECHNOLOGICAL APPLICATIONS; THEORETICAL STUDY; THERMAL EXPANSION COEFFICIENTS; THERMOMECHANICAL STABILITY; YIELD BEHAVIORS; YOUNG'S MODULUS; Z-DIRECTIONS;

ANISOTROPY; ELASTIC CONSTANTS; ELASTICITY; MECHANICAL STABILITY; MOLECULAR DYNAMICS; NANOTUBES; SYSTEM STABILITY; THERMAL EXPANSION; VIBRATIONS (MECHANICAL);

PEPTIDES;

CYCLOPEPTIDE; NANOTUBE;

ARTICLE; CHEMISTRY; ELASTICITY; MECHANICAL STRESS; MOLECULAR DYNAMICS; THERMODYNAMICS;

ELASTICITY; MOLECULAR DYNAMICS SIMULATION; NANOTUBES; PEPTIDES, CYCLIC; STRESS, MECHANICAL; THERMODYNAMICS;

EID: 77349124502     PISSN: 09574484     EISSN: 13616528     Source Type: Journal    
DOI: 10.1088/0957-4484/21/11/115703     Document Type: Article

References (36)

1. Gazit E 2007 Chem. Soc. Rev. 36 1263-9
2. Colombo G, Soto B and Gazit E 2007 Trends Biotechnol. 25 211-8
3. Holmes T C 2000 Proc. Natl Acad. Sci. 97 6728-33
4. Ghadiri M R et al 1993 Nature 366 324-7
5. Cellmer T, Bratko D, Prausnitz J M and Blanch H 2005 Proc. Natl Acad. Sci. 102 11692-7
6. Boudreault P-L, Arseneault M, Otis M and Voyer N 2008 Chem. Commun. 2118-20
7. Buehler M J and Ackbarow T 2007 Mater. Today 10 46-58
8. Buehler M J, Keten S and Ackbarow T 2008 Prog. Mater. Sci. 53 81101-241
9. Holmes T C 2000 Proc. Natl Acad. Sci. 97 6728-33
10. Keating N 1966 Phys. Rev. Lett. 145 637
11. Keating N 1966 Phys. Rev. Lett. 149 674
12. Gao G, ain T and Goddard W A 1998 Nanotechnology 9 183-91
13. ain T and Ray J R 1988 Phys. Rev. B 38 7940
14. ain T and Pettitt B M 1989 Phys. Rev. B 39 12484
15. Kalay M, Kart H H, Kart S O and ain T 2009 J. Alloys Comp. 484 431-8
16. Pham H and Cagin T Second and third-order elastic constants of Fe from first-principles Acta Mater. submitted
17. Kart S O, Uludogan M, Karaman I and ain T 2008 Phys. Status Solidi a 205 1026
18. Zhao J, Winey J M and Gupta Y M 2006 Phys. Rev. B 75 094105
19. Andersen H C 1980 J. Chem. Phys. 72 2384
20. Parrinello M and Rahman A 1980 Phys. Rev. Lett. 45 1196
21. Parrinello M and Rahman A 1981 J. Appl. Phys. 52 7182
22. Ray J R and Rahman A 1984 J. Chem. Phys. 80 4423
23. Thurston R N 1964 Physical Acoustic vol 1 ed W P Mason (New York: Academic) Part A
24. ain T, Dereli G, Uludogan M and Tomak M 1999 Phys. Rev. B 59 3468-73
25. Uludogan M, Guarin D P, Gomez Z E, ain T and Goddard W A 2008 CMES-Comp. Model. Engin. Sci. 24 215-38
26. Fan C F, ain T and Chen Z M 1994 Macromolecules 27 2383-91
27. Chakrabarty A and ain T 2008 CMC-Comput. Mater. Cont. 7 167-89
28. Nielsen O H 1986 Phys. Rev. B 34 5808
29. Hartgerink J D, Granja J R, Milligan R A and Ghadiri M R 1996 J. Am. Chem. Soc. 118 43-50
30. Fernandez-Lopez S et al 2001 Nature 412 452-5
31. Engels M, Bashford D and Ghadiri M R 1995 J. Am. Chem. Soc. 117 9151-8
32. Carvajal-Diaz J A, Liu L and ain T 2009 J. Comput. Theoret. Nanosci. 6 894-902
33. Phillips J C, Braun R, Wang W, Gumbart J, Tajkhorshid E, Villa E, Chipot C, Skeel R D, Kale L and Schulten K 2005 J. Comput. Chem. 26 1781-802
34. ain T and Ray J R 1988 Phys. Rev. B 37 699
35. ain T and Ray J R 1988 Phys. Rev. A 37 247
36. Kol N, Adler-Abramovich L, Barlam D, Shneck R Z, Gazit E and Rousso I 2005 Nano Lett. 5 1343-6