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Volumn 1, Issue 2, 2010, Pages 556-561

Polarizable continuum reaction-field solvation models affording smooth potential energy surfaces

Author keywords

General theory; Molecular structure; Quantum chemistry

Indexed keywords

ATOMIC SPHERE; CAVITY SURFACES; CONDUCTOR LIKE SCREENING MODELS; DISCRETIZATIONS; ELEMENT METHOD; ENERGY GRADIENTS; FINITE DIFFERENCE; GAUSSIANS; GENERAL THEORY; GEOMETRY OPTIMIZATION; MATRIX; POLARIZABLE CONTINUUM MODEL; POLARIZABLE CONTINUUMS; REACTION FIELDS; SOLVATION MODELS; SPURIOUS OSCILLATIONS; SURFACE GRIDS;

EID: 77349087592     PISSN: None     EISSN: 19487185     Source Type: Journal    
DOI: 10.1021/jz900282c     Document Type: Article
Times cited : (115)

References (26)
  • 1
    • 84961980477 scopus 로고    scopus 로고
    • Quantum Mechanical Continuum Solvation Models
    • Tomasi, J.; Mennucci, B.; Cammi, R. Quantum Mechanical Continuum Solvation Models. Chem. Rev. 2005, 105, 2999-3093.
    • (2005) Chem. Rev , vol.105 , pp. 2999-3093
    • Tomasi, J.1    Mennucci, B.2    Cammi, R.3
  • 2
    • 0000262725 scopus 로고    scopus 로고
    • Reaction Field Treatment of Charge Penetration
    • Chipman, D. M. Reaction Field Treatment of Charge Penetration. J. Chem. Phys. 2000, 112, 5558-5565.
    • (2000) J. Chem. Phys , vol.112 , pp. 5558-5565
    • Chipman, D.M.1
  • 3
    • 84962359221 scopus 로고    scopus 로고
    • Ab Initio Study of SolvatedMolecules: A NewImplementation of the Polarizable Continuum Model
    • Cossi, M.; Barone, V.; Cammi, R.; Tomasi, J. Ab Initio Study of SolvatedMolecules: A NewImplementation of the Polarizable Continuum Model. Chem. Phys. Lett. 1996, 255, 327-335.
    • (1996) Chem. Phys. Lett , vol.255 , pp. 327-335
    • Cossi, M.1    Barone, V.2    Cammi, R.3    Tomasi, J.4
  • 4
    • 84961981991 scopus 로고    scopus 로고
    • New Definition of Cavities for the Computation of Solvation Free Energies by the Polarizable Continuum Model
    • Barone, V.; Cossi, M.; Tomasi, J. A New Definition of Cavities for the Computation of Solvation Free Energies by the Polarizable Continuum Model. J. Chem. Phys. 1997, 107, 3210-3221.
    • (1997) J. Chem. Phys , vol.107 , pp. 3210-3221
    • Barone, V.1    Cossi, M.2    Tomasi, J.A.3
  • 5
    • 84986435733 scopus 로고
    • GEPOL: An Improved Description of Molecular Surfaces. III: A New Algorithm for the Computation of a Solvent-Excluding Surface
    • Pascual-Ahuir, J. L.; Silla, E.; Tunon, I. GEPOL: An Improved Description of Molecular Surfaces. III: A New Algorithm for the Computation of a Solvent-Excluding Surface. J. Comput. Chem. 1994, 15, 1127-1138.
    • (1994) J. Comput. Chem , vol.15 , pp. 1127-1138
    • Pascual-Ahuir, J.L.1    Silla, E.2    Tunon, I.3
  • 6
    • 1542356431 scopus 로고    scopus 로고
    • Solvent Effects. 5. Influence of Cavity Shape, Truncation of Electrostatics, and Electron Correlation on Ab Initio Reaction Field Calculations
    • Foresman, J. B.; Keith, T. A.; Wiberg, K. B.; Snoonian, J.; Frisch, M. J. Solvent Effects. 5. Influence of Cavity Shape, Truncation of Electrostatics, and Electron Correlation on Ab Initio Reaction Field Calculations. J. Phys. Chem. 1996, 100, 16098-16104.
    • (1996) J. Phys. Chem , vol.100 , pp. 16098-16104
    • Foresman, J.B.1    Keith, T.A.2    Wiberg, K.B.3    Snoonian, J.4    Frisch, M.J.5
  • 7
    • 0036114065 scopus 로고    scopus 로고
    • Implementation of Solvent Reaction Fields for Electronic Structure
    • Chipman, D. M.; Dupuis, M. Implementation of Solvent Reaction Fields for Electronic Structure. Theor. Chem. Acc. 2002,107,90-102.
    • (2002) Theor. Chem. Acc , vol.107 , pp. 90-102
    • Chipman, D.M.1    Dupuis, M.2
  • 8
    • 84961981995 scopus 로고    scopus 로고
    • Comparison of Solvent Reaction Field Representations
    • Chipman, D. M. Comparison of Solvent Reaction Field Representations. Theor. Chem. Acc. 2002, 107, 80-89.
    • (2002) Theor. Chem. Acc , vol.107 , pp. 80-89
    • Chipman, D.M.1
  • 9
    • 84961980743 scopus 로고
    • COSMO: A New Approach to Dielectric Screening in Solvents with Explicit Expressions for the Screening Energy and Its Gradient
    • Klamt, A.; Schuurmann, G. COSMO: A New Approach to Dielectric Screening in Solvents with Explicit Expressions for the Screening Energy and Its Gradient. J. Chem. Soc., Perkin Trans. 2 1993, 799-805.
    • (1993) J. Chem. Soc., Perkin Trans , vol.2 , pp. 799-805
    • Klamt, A.1    Schuurmann, G.2
  • 10
    • 84961985847 scopus 로고    scopus 로고
    • Quantum Calculation of Molecular Energies and Energy Gradients in Solution by a Conductor Solvent Model
    • Barone, V.; Cossi, M. Quantum Calculation of Molecular Energies and Energy Gradients in Solution by a Conductor Solvent Model. J. Phys. Chem. A 1998, 102, 1995-2001.
    • (1998) J. Phys. Chem. A , vol.102 , pp. 1995-2001
    • Barone, V.1    Cossi, M.2
  • 11
    • 0031209054 scopus 로고    scopus 로고
    • New Integral Equation Formalism for the Polarizable Continuum Model: Theoretical Background and Applications to Isotropic and Anisotropic Dielectrics
    • Cances, E.; Mennucci, B.; Tomasi, J. A New Integral Equation Formalism for the Polarizable Continuum Model: Theoretical Background and Applications to Isotropic and Anisotropic Dielectrics. J. Chem. Phys. 1997, 107, 3032-3041.
    • (1997) J. Chem. Phys , vol.107 , pp. 3032-3041
    • Cances, E.1    Mennucci, B.2    Tomasi, J.A.3
  • 12
    • 0001355552 scopus 로고    scopus 로고
    • Smooth Solvation Potential Based on the Conductor-Like Screening Model
    • York, D. M.; Karplus, M. Smooth Solvation Potential Based on the Conductor-Like Screening Model. J. Phys. Chem. A 1999, 103,11060-11079.
    • (1999) J. Phys. Chem. A , vol.103 , pp. 11060-11079
    • York, D.M.1    Karplus, M.2
  • 13
    • 0037439720 scopus 로고    scopus 로고
    • Ab Initio Molecular Dynamics with a Continuum Solvation Model
    • Senn, H. M.; Margl, P. M.; Schmid, R.; Ziegler, T.; Blochl, P. E. Ab Initio Molecular Dynamics with a Continuum Solvation Model. J. Chem. Phys. 2003, 118, 1089-1100.
    • (2003) J. Chem. Phys , vol.118 , pp. 1089-1100
    • Senn, H.M.1    Margl, P.M.2    Schmid, R.3    Ziegler, T.4    Blochl, P.E.5
  • 14
    • 84962427522 scopus 로고    scopus 로고
    • A Tessellationless Integration Grid for the Polarizable Continuum Model Reaction Field
    • Pomelli, C. S. A Tessellationless Integration Grid for the Polarizable Continuum Model Reaction Field. J. Comput. Chem. 2004, 25, 1532-1541.
    • (2004) J. Comput. Chem , vol.25 , pp. 1532-1541
    • Pomelli, C.S.1
  • 15
    • 84962433811 scopus 로고    scopus 로고
    • Li,H. Continuous andSmooth Potential EnergySurface for Conductor-Like Screening Solvation Model Using Fixed Points with Variable Areas
    • Su, P.; Li,H. Continuous andSmooth Potential EnergySurface for Conductor-Like Screening Solvation Model Using Fixed Points with Variable Areas. J. Chem. Phys. 2009, 130, 074109.
    • (2009) J. Chem. Phys , vol.130 , pp. 074109
    • Su, P.1
  • 16
    • 77349101719 scopus 로고    scopus 로고
    • The factor of 1/f(riK) in eq 5 is absent in the formulas appearing in refs 12 and 17. Professor D. M. York, in a private communication, assures us that the errors are typographical, and that the calculations reported in these papers used correct gradients
    • The factor of 1/f(riK) in eq 5 is absent in the formulas appearing in refs 12 and 17. Professor D. M. York, in a private communication, assures us that the errors are typographical, and that the calculations reported in these papers used correct gradients.
  • 17
    • 19944382179 scopus 로고    scopus 로고
    • Smooth Solvation Method for d-Orbital Semiemprical Calculations of Biological Reactions. 1. Implementation
    • Khandogin, J.; Gregersen, B. A.; Thiel, W.; York, D. M. Smooth Solvation Method for d-Orbital Semiemprical Calculations of Biological Reactions. 1. Implementation. J. Phys. Chem. B 2005,109,9799-9809.
    • (2005) J. Phys. Chem. B , vol.109 , pp. 9799-9809
    • Khandogin, J.1    Gregersen, B.A.2    Thiel, W.3    York, D.M.4
  • 18
    • 33845281231 scopus 로고
    • Simple Method for the Calculation of Hydration Enthalpies of Polar Molecules with Arbitrary Shapes
    • Rashin, A. A.; Namboodiri, K. A Simple Method for the Calculation of Hydration Enthalpies of Polar Molecules with Arbitrary Shapes. J. Phys. Chem. 1987, 91, 6003-6012.
    • (1987) J. Phys. Chem , vol.91 , pp. 6003-6012
    • Rashin, A.A.1    Namboodiri, K.A.2
  • 19
    • 84986456126 scopus 로고
    • A Simple Yet Accurate Boundary Element Method for Continuum Dielectric Calculations
    • Pursima, E. O.; Nilar, S. H. A Simple Yet Accurate Boundary Element Method for Continuum Dielectric Calculations. J. Comput. Chem. 1995, 16, 681-689.
    • (1995) J. Comput. Chem , vol.16 , pp. 681-689
    • Pursima, E.O.1    Nilar, S.H.2
  • 20
    • 38349151222 scopus 로고    scopus 로고
    • The Limits of Local Correlation Theory: Electronic Delocalization and Chemically Smooth Potential Energy Surfaces
    • Subotnik, J. E.; Sodt, A.; Head-Gordon, M. The Limits of Local Correlation Theory: Electronic Delocalization and Chemically Smooth Potential Energy Surfaces. J. Chem. Phys. 2008,128,034103.
    • (2008) J. Chem. Phys , vol.128 , pp. 034103
    • Subotnik, J.E.1    Sodt, A.2    Head-Gordon, M.3
  • 22
    • 84962438921 scopus 로고    scopus 로고
    • Improvingthe Efficiencyand Convergence of Geometry Optimization with the Polarizable Continuum Model: New Energy Gradients and Molecular Surface Tessellation
    • Li, H.; Jensen, J. Improvingthe Efficiencyand Convergence of Geometry Optimization with the Polarizable Continuum Model: New Energy Gradients and Molecular Surface Tessellation. J. Comput. Chem. 2004, 25, 1449-1462.
    • (2004) J. Comput. Chem , vol.25 , pp. 1449-1462
    • Li, H.1    Jensen, J.2
  • 23
    • 0001398008 scopus 로고    scopus 로고
    • How Well Does a Restrained Electrostatic Potential (RESP) Model Perform in Calculating Conformational Energies of Organic and Biological Molecules?
    • Wang, J.; Cieplak, P.; Kollman, P. A. How Well Does a Restrained Electrostatic Potential (RESP) Model Perform in Calculating Conformational Energies of Organic and Biological Molecules? J. Comput. Chem. 2000, 21, 1049-1074.
    • (2000) J. Comput. Chem , vol.21 , pp. 1049-1074
    • Wang, J.1    Cieplak, P.2    Kollman, P.A.3
  • 24
    • 84986533294 scopus 로고
    • Dispersion and Repulsion Contributions to the Solvation Energy: Refinements to a Simple Computational Model in the Continuum Approximation
    • Floris, F.M.; Tomasi, J.; Ahuir, J. L.P. Dispersion and Repulsion Contributions to the Solvation Energy: Refinements to a Simple Computational Model in the Continuum Approximation. J. Comput. Chem. 1991, 12, 784-791.
    • (1991) J. Comput. Chem , vol.12 , pp. 784-791
    • Floris, F.M.1    Tomasi, J.2    Ahuir, J.L.P.3
  • 25
    • 84962427366 scopus 로고    scopus 로고
    • Smooth Potential Energy Surface for Cavitation, Dispersion, and Repulsion Free Energies in Polarizable Continuum Model
    • Wang, Y.; Li, H. Smooth Potential Energy Surface for Cavitation, Dispersion, and Repulsion Free Energies in Polarizable Continuum Model. J. Chem. Phys. 2009, 131, 206101.
    • (2009) J. Chem. Phys , vol.131 , pp. 206101
    • Wang, Y.1    Li, H.2
  • 26
    • 84962430704 scopus 로고    scopus 로고
    • Analytical First Derivatives of Molecular Surfaces with Respect to Nuclear Coordinates
    • Cossi, M.; Mennucci, B.; Cammi, R. Analytical First Derivatives of Molecular Surfaces with Respect to Nuclear Coordinates. J. Comput. Chem. 1996, 17, 57-73.
    • (1996) J. Comput. Chem , vol.17 , pp. 57-73
    • Cossi, M.1    Mennucci, B.2    Cammi, R.3


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