Fragmentation and demographic expansion in the Mexican populations of Pinus ayacahuite var. Ayacahuite;Fragmentación y expansión demográfica en las poblaciones mexicanas de Pinus ayacahuite var. Ayacahuite

Boletin de la Sociedad Botanica de Mexico

Volumn 83, Issue , 2008, Pages 25-36

  Ortíz Medrano, Alejandra ^a   Moreno Letelier, Alejandra ^a   Piñero, Daniel ^a  

^a INSTITUTO DE ECOLOGÍA   (Mexico)

Author keywords

Historical demography; Phylogeography; Pinaceae; Pleistocene

Indexed keywords

EID: 77249153230     PISSN: 03662128     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (48)

1. Afzal-Rafi i Z. y Dodd R.S. 2007. Chloroplast DNA supports a hypothesis of glacial refugia over postglacial recolonization in disjunct populations of black pine (Pinus nigra) in Western Europe. Molecular Ecology 16: 723-736.
2. Bogan L., http://www.go.ednet.ns.ca/∼larry/bsc/jslatlng.html.
3. Bossart J.L. y Prowell D.P. 1998. Genetic estimates of population structure and gene flow: limitations, lessons and new directions. Trends in Ecology and Evolution 13: 202-206.
4. Bucci G., González- Martínez S.C, Le Provost G., Plomion C., Ribeiro M.M., Sebastiani F., Alía R. y Vendramin G.G. 2007. Range-wide phylogeography and gene zones in Pinus pinaster Ait. revealed by chloroplast microsatellite markers. Molecular Ecology 16: 2137-2153.
5. Burban C. y Petit R.J. 2003. Phylogeography of maritime pine inferred with organelle markers having contrasted inheritance. Molecular Ecology 12: 1487-1495.
6. Chambers G.K. y MacAvoy E.S. 2000. Microsatellites: consensus and controversy. Comparative Biochemistry and Phisiology Part B 126: 455 - 476.
7. Clement M., Posada D. y Crandall K. 2000. TCS: a computer program to estimate gene genealogies. Molecular Ecology 9: 1657-1660.
8. Cuenca A., Escalante A.E. y Piñero D. 2003. Long-distance colonization, isolation by distance, and historical demography in a relictual Mexican pinyon pine (Pinus nelsonii Shaw) as revealed by paternally inherited genetic markers (cpSSRs). Molecular Ecology 12: 2087-2097.
9. Dupanloup I., Schneider S. y Excoffier L. 2002. A simulated annealing approach to define the genetic structure of populations. Molecular Ecology 11: 2571-2581.
10. Echt C.S., deVerno L.L., Anzidei M. y Vendramin G.G. 1998. Chloroplast microsatellites reveal population genetic diversity in red pine, Pinus resinosa Ait. Molecular Ecology 7: 307-316.
11. Eguiluz Piedra T. 1978. Ensayo de integración de los conocimientos sobre el género Pinus en México. Tesis de ingeniero agrónomo especialista en bosques. Departamento de Enseñanza, Investigación y Servicio en Bosques. Escuela Nacional de Agricultura, Chapingo, México. 623 pp.
12. Escalante A.E. 2001. Estructura genética de poblaciones de Pinus pinceana G. Gordon & Glendinning usando como marcadores moleculares microsatélites de cloroplasto (cpSSR's). Tesis de Licenciatura, Facultad de Ciencias, Universidad Nacional Autónoma de México, Ciudad de México, México. 95 pp.
13. Excoffi er L., Laval G. y Schneider S. 2005. Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1: 47-80.
14. Farjon A. y Styles B. 1997. Flora Neotropica: Pinus (Pinaceae). New York Botanical Garden. Nueva York, EUA. 293 pp.
15. Graham A. 1987. Tropical American Tertiary fl oras and paleoenvironments: Mexico, Costa Rica and Panama. American Journal of Botany 74: 1519-1531.
16. Graham A. 1999. The Tertiary history of the northern temperate element in the northern Latin American biota. American Journal of Botany 86: 32-38.
17. Hardy O.J., Charbonnel N., Fréville H. y Heuertz M. 2003. Microsatellite allele sizes: a simple test to assess their signifi cance on genetic differentiation. Genetics 163: 1467-1482.
18. Hardy O. y Vekemans X. 2002. SPAGeDi: a versatile computer program to analyse spatial genetic structure at the individual or population levels. Molecular Ecology Notes 2: 618-620.
19. Hewitt G. 2000. The genetic legacy of the Quaternary ice ages. Nature 405: 907-913.
20. Hwang S.-Y., Lin T.-P., Ma C.-S., Lin C.-L., Chung J.-D. y Yang J.-C. 2003. Postglacial population growth of Cunninghamia konishii (Cupressaceae) inferred from phylogeographical and mismatch analysis of chloroplast DNA variation. Molecular Ecology 12: 2689-2695.
21. Krugman S.L. y Jenkinson J.L. 1974. Pinus L. En: Nisley R.G. Ed. Woody Plant Seed Manual. Disponible en la red http://www.nsl.fs.fed.us/wpsm.
22. Lachniet M.S. 2004. Late quaternary glaciation of Costa Rica and Guatemala, Central America. En: Ehlers y Gibbard Eds. Quaternary glaciations - extent and chronology, Part III, pp. 135- 138, Elsevier, Amsterdam.
23. Marshall C.J. y Liebherr J.K. 2000. Cladistic biogeography of the Mexican transition zone. Journal of Biogeography 27: 203- 216.
24. Marshall H.D., Newton C. y Ritland K. 2002. Chloroplast phylogeography and evolution of highly polymorphic microsatellites in lodgepole pine (Pinus contorta). Theoretical and Applied Genetics 104: 367-378.
25. Mitton J., Kreiser B. y Latta R. 2000. Glacial refugia of limber pine (Pinus fl exilis James) inferred from the population structure of mitochondrial DNA. Molecular Ecology 9: 91-97.
26. Moreno-Letelier A. y Piñero D. Enprensa. Phylogeographic structure of Pinus strobiformis Engelm. across the Chihuahuan Desert filter-barrier. Journal of Biogeography.
27. Musálem M. y Ramírez A. 2003. Monografía de Pinus ayacahuite. INIFAP. México, D.F.
28. Navascués M. y Emerson B. 2005. Chloroplast microsatellites: measures of genetic diversity and the effect of homoplasy. Molecular Ecology 14: 1333-1341.
29. Navascués M., Vaxevanidou Z., González-Martínez S.C., Climent J., Gil L. y Emerson B. 2006. Chloroplast microsatellites reveal colonization and metapopulation dynamics in the Canary Island pine. Molecular Ecology 15: 2691-2698.
30. Nei M. 1987. Molecular evolutionary genetics. Columbia University Press. Nueva York.
31. Newton A.C., Allnutt T.R., Gillies A.C.M., Lowe A.J. y Ennos R.A. 1999. Molecular phylogeography, intraspecific variation and the conservation of tree species. Trends in Ecology and Evolution 14: 140-145.
32. Perry J.P. 1991. The pines of Mexico and Central America. Timber Press. EUA.
33. Peterson A.T., Soberón J. y Sánchez-Cordero V. 1999. Conservatism of ecological niches in evolutionary time. Science 285: 1265-1267.
34. Petit R.J., Csaikl U.M., Bordács S., Burg K., Coart E., Cottrell J., van Dam B., Deans J.D., Dumolin-Lapègue S., Fineschi S., Finkeldey R., Gillies A., Glaz I., Goicoechea P.G., Jensen J.S., König A.O., Lowe A.J., Madsen S.F., Mátyás G., Munro R.C., Olalde M., Pemonge M., Popescu F., Slade D., Tabbener H., Taurchini D., de Vries S.G.M., Ziegenhagen B., Kremer A. 2002. Chloroplast DNA variation in European white oaks - Phylogeography and patterns of diversity based on data from over 2600 populations. Forest Ecology and Managment 156: 5-26.
35. Pires de Campos Telles M. y Diniz-Filho J.A.F. 2005. Multiple Mantel tests and isolation-by-distance, taking into account long-term historical divergence. Genetics and Molecular Research 4: 742-748.
36. Posada D., Crandall K.A. y Templeton A.R. 2000. GeoDis: A program for the Cladistic Nested Analysis of the Geographical Distribution of Genetic Haplotypes. Molecular Ecology 9: 487-488.
37. Rogers A. 2004. Lecture notes on gene genealogies. www.anthro.utah.edu/ ∼rogers/bio5410/Lectures/a-alu.pdf.
38. Savin S.M. 1977. The history of the earth́s surface temperature during the past 100 million years. Annual Review of Earth and Planetary Sciences 5: 319-355.
39. Schlötterer, C. 2000. Evolutionary dynamics of microsatellite DNA. Chromosoma 109: 365-371.
40. Sullivan J., Markert J.A. y Kilpatrick C.W. 1997. Phylogeography and molecular systematics of the Peromyscus aztecus species group (Rodentia: Muridae) inferred using parsimony and likelihood. Systematic Biology 46: 426-440.
41. Templeton A.R. 2006. Population genetics and microevolutionary theory. John Wiley and Sons Inc. Hoboken, New Jersey. 705 pp.
42. Templeton A.R., Routman R. y Phillips C.A. 1995. Separating population structure from population history: a cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum. Genetics 149: 767-782.
43. Toledo V.M. 1982. Pleistocene changes in vegetation in tropical Mexico. En: Prance G.T. Ed. Biological diversifi cation in the tropics, pp 93-111, Columbia University Press, Nueva York.
44. Vaxevanidou Z., González-Martínez S.C., Climent J. y Gil L. 2006. Tree populations bordering on extinction: A case study in the endemic Canary Island pine. Biological Conservation 129: 451-460.
45. Vázquez-Lobo A. 1996. Filogenia de hongos endófitos del género Pinus: Implementación de técnicas moleculares y resultados preliminares. Tesis de licenciatura, Facultad de Ciencias, Universidad Nacional Autónoma de México, México, D.F. 66 pp.
46. Vázquez-Selem L. y Heine K. 2004. Late quaternary glaciation of Mexico. En: Ehlers y Gibbard Eds. Quaternary glaciations - extent and chronology, Part III, pp. 233-242, Elsevier, Amsterdam.
47. Vendramin G.G., Lelli L., Rossi P. y Morgane M. 1996. A set of primers for the amplifi cation of 20 chloroplast microsatellites in Pinaceae. Molecular Ecology 5: 595-598.
48. Vendramin G.G., Degen B., Petit R.J., Anzidei M., Madaghiele A. y Ziegenhagen B. 1999. High level of variation at Abies alba chloroplast microsatellite loci in Europe. Molecular Ecology 8: 1117-1126.