메뉴 건너뛰기




Volumn 104, Issue 2-3, 2002, Pages 367-378

Chloroplast phylogeography and evolution of highly polymorphic microsatellites in lodgepole pine (Pinus contorta)

Author keywords

Chloroplast; Lodgepole pine; Microsatellites; Mutational model; Phylogeography

Indexed keywords

DNA SEQUENCES; FORESTRY; MUTAGENESIS; PLANTS (BOTANY);

EID: 0347927382     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220100687     Document Type: Article
Times cited : (57)

References (45)
  • 1
    • 0023163377 scopus 로고
    • Mitochondrial DNA and human evolution
    • Cann RL, Stoneking M, Wilson AC (1987) Mitochondrial DNA and human evolution. Nature 325:31-36
    • (1987) Nature , vol.325 , pp. 31-36
    • Cann, R.L.1    Stoneking, M.2    Wilson, A.C.3
  • 3
    • 0030478757 scopus 로고    scopus 로고
    • Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data
    • Cornuet JM, Luikart G (1996) Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144:2001-2014
    • (1996) Genetics , vol.144 , pp. 2001-2014
    • Cornuet, J.M.1    Luikart, G.2
  • 5
    • 0023529624 scopus 로고
    • Geographical variation of lodgepole pine in relation to population history
    • Cwynar LC, MacDonald GM (1987) Geographical variation of lodgepole pine in relation to population history. Am Nat 129:463-469
    • (1987) Am Nat , vol.129 , pp. 463-469
    • Cwynar, L.C.1    MacDonald, G.M.2
  • 6
    • 0002036414 scopus 로고
    • Allozyme variability and evolution of lodgepole pine (Pinus contorta var. latifolia) and jack pine (P. banksiana) in Alberta
    • Dancik BP, Yeh FC (1982) Allozyme variability and evolution of lodgepole pine (Pinus contorta var. latifolia) and jack pine (P. banksiana) in Alberta. Can J Genet Cytol 25:57-64
    • (1982) Can J Genet Cytol , vol.25 , pp. 57-64
    • Dancik, B.P.1    Yeh, F.C.2
  • 8
    • 0000937540 scopus 로고
    • Taxonomic and population differentiation of mitochondrial diversity in Pinus banksiana and Pinus contorta
    • Dong J, Wagner DB (1993) Taxonomic and population differentiation of mitochondrial diversity in Pinus banksiana and Pinus contorta. Theor Appl Genet 86:573-578
    • (1993) Theor Appl Genet , vol.86 , pp. 573-578
    • Dong, J.1    Wagner, D.B.2
  • 9
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19:11-15
    • (1987) Phytochem Bull , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 10
    • 0031991092 scopus 로고    scopus 로고
    • Size homoplasy in chloroplast microsatellites of wild perennial relatives of soybean (Glycine subgenus Glycine)
    • Doyle JJ, Morgante M, Tingey SV, Powell W (1998) Size homoplasy in chloroplast microsatellites of wild perennial relatives of soybean (Glycine subgenus Glycine). Mol Biol Evol 15:215-218
    • (1998) Mol Biol Evol , vol.15 , pp. 215-218
    • Doyle, J.J.1    Morgante, M.2    Tingey, S.V.3    Powell, W.4
  • 11
  • 12
    • 0000377715 scopus 로고
    • Linkage disequilibrium between allozymes in natural populations of lodgepole pine
    • Epperson BK, Allard RW (1987) Linkage disequilibrium between allozymes in natural populations of lodgepole pine. Genetics 115:341-352
    • (1987) Genetics , vol.115 , pp. 341-352
    • Epperson, B.K.1    Allard, R.W.2
  • 13
    • 0024615644 scopus 로고
    • Spatial autocorrelation analysis of the distribution of genotypes within populations of lodgepole pine
    • Epperson BK, Allard RW (1989) Spatial autocorrelation analysis of the distribution of genotypes within populations of lodgepole pine. Genetics 121:369-377
    • (1989) Genetics , vol.121 , pp. 369-377
    • Epperson, B.K.1    Allard, R.W.2
  • 15
    • 0029957946 scopus 로고    scopus 로고
    • Statistical properties of the variation at linked microsatellite loci: Implications for the history of human Y chromosomes
    • Goldstein DB, Zhivotovsky LA, Nayar K, Linares AR, Cavelli-Sforza LL, et al. (1996) Statistical properties of the variation at linked microsatellite loci: Implications for the history of human Y chromosomes. Mol Biol Evol 13:1213-1218
    • (1996) Mol Biol Evol , vol.13 , pp. 1213-1218
    • Goldstein, D.B.1    Zhivotovsky, L.A.2    Nayar, K.3    Linares, A.R.4    Cavelli-Sforza, L.L.5
  • 16
    • 0032928507 scopus 로고    scopus 로고
    • Four primer pairs for the amplification of chloroplast intergenic regions with intraspecific variation
    • Hamilton MB (1999) Four primer pairs for the amplification of chloroplast intergenic regions with intraspecific variation. Mol Ecol 8:521-523
    • (1999) Mol Ecol , vol.8 , pp. 521-523
    • Hamilton, M.B.1
  • 17
    • 0031724687 scopus 로고    scopus 로고
    • Chloroplast DNA phylogeography of Alnus glutinosa (L.) Gaertn
    • King RA, Ferris C (1998) Chloroplast DNA phylogeography of Alnus glutinosa (L.) Gaertn. Mol Ecol 7:1151-1161
    • (1998) Mol Ecol , vol.7 , pp. 1151-1161
    • King, R.A.1    Ferris, C.2
  • 18
    • 0022166415 scopus 로고
    • A fossil pollen based reconstruction of the late Quaternary history of lodgepole pine (Pinus contorra ssp. latifolia) in the western interior of Canada
    • MacDonald GM, Cwynar LC (1985) A fossil pollen based reconstruction of the late Quaternary history of lodgepole pine (Pinus contorra ssp. latifolia) in the western interior of Canada. Can J For Res 15:1039-1044
    • (1985) Can J For Res , vol.15 , pp. 1039-1044
    • MacDonald, G.M.1    Cwynar, L.C.2
  • 19
    • 0000039887 scopus 로고
    • Post-glacial population growth rates of Pinus contorta ssp. latifolia in western Canada
    • MacDonald GM, Cwynar LC (1991) Post-glacial population growth rates of Pinus contorta ssp. latifolia in western Canada. J Ecol 79:417-429
    • (1991) J Ecol , vol.79 , pp. 417-429
    • MacDonald, G.M.1    Cwynar, L.C.2
  • 21
    • 0033120607 scopus 로고    scopus 로고
    • Molecular phylogeography, intraspecific variation and the conservation of tree species
    • Newton AC, Allnutt TR, Gillies ACM, Lowe AJ, Ennos RA (1999) Molecular phylogeography, intraspecific variation and the conservation of tree species. Trends Ecol Evol 14:140-145
    • (1999) Trends Ecol Evol , vol.14 , pp. 140-145
    • Newton, A.C.1    Allnutt, T.R.2    Gillies, A.C.M.3    Lowe, A.J.4    Ennos, R.A.5
  • 22
    • 0029101585 scopus 로고
    • Polymorphic simple sequence repeat regions in chloroplast genomes: Applications to the population genetics of pines
    • Powell W, Morgante M, McDevitt R, Vendramin GG, Rafalski JA (1995a) Polymorphic simple sequence repeat regions in chloroplast genomes: Applications to the population genetics of pines. Proc Natl Acad Sci USA 92:7759-7763
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 7759-7763
    • Powell, W.1    Morgante, M.2    McDevitt, R.3    Vendramin, G.G.4    Rafalski, J.A.5
  • 26
    • 0032808276 scopus 로고    scopus 로고
    • A view of modern human origins from Y chromosome microsatellite variation
    • Seielstad M, Bekele E, Ibrahim M, Toure A, Traore M (1999) A view of modern human origins from Y chromosome microsatellite variation. Genome Res 9:558-67
    • (1999) Genome Res , vol.9 , pp. 558-567
    • Seielstad, M.1    Bekele, E.2    Ibrahim, M.3    Toure, A.4    Traore, M.5
  • 27
    • 0027229993 scopus 로고
    • VNTR allele frequency distributions under the stepwise mutation model: A computer simulation approach
    • Shriver MD, Jin L, Chakraborty R, Boerwinkle E (1993) VNTR allele frequency distributions under the stepwise mutation model: A computer simulation approach. Genetics 134:983-993
    • (1993) Genetics , vol.134 , pp. 983-993
    • Shriver, M.D.1    Jin, L.2    Chakraborty, R.3    Boerwinkle, E.4
  • 28
    • 0003217221 scopus 로고    scopus 로고
    • Evaluation of mating dynamics and pollen contamination in a lodgepole pine seed orchard using chloroplast DNA markers
    • in press
    • Stoehr MU, Newton C (2001) Evaluation of mating dynamics and pollen contamination in a lodgepole pine seed orchard using chloroplast DNA markers. Can J For Res (in press)
    • (2001) Can J For Res
    • Stoehr, M.U.1    Newton, C.2
  • 29
    • 0032004210 scopus 로고    scopus 로고
    • Application of a chloroplast DNA marker in seed orchard management evaluations of Douglas-fir
    • Stoehr MU, Orvar BL, Vo TM, Gawley JR, Webber JE, Newton CH (1998) Application of a chloroplast DNA marker in seed orchard management evaluations of Douglas-fir. Can J For Res 28:187-195
    • (1998) Can J For Res , vol.28 , pp. 187-195
    • Stoehr, M.U.1    Orvar, B.L.2    Vo, T.M.3    Gawley, J.R.4    Webber, J.E.5    Newton, C.H.6
  • 31
    • 0029058158 scopus 로고
    • Separating population structure from population history: A cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum
    • Templeton AR, Routman E, Phillips CA (1995) Separating population structure from population history: A cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum. Genetics 140:767-782
    • (1995) Genetics , vol.140 , pp. 767-782
    • Templeton, A.R.1    Routman, E.2    Phillips, C.A.3
  • 33
    • 0030208885 scopus 로고    scopus 로고
    • A set of primers for the amplification of 20 chloroplast microsatellites in Pinaceae
    • Vendramin GG, Lelli L, Rossi P, Morgante M (1996) A set of primers for the amplification of 20 chloroplast microsatellites in Pinaceae. Mol Ecol 5:595-598
    • (1996) Mol Ecol , vol.5 , pp. 595-598
    • Vendramin, G.G.1    Lelli, L.2    Rossi, P.3    Morgante, M.4
  • 34
    • 0031755949 scopus 로고    scopus 로고
    • Distribution of genetic diversity in Pinus pinaster Ait. as revealed by chloroplast microsatellites
    • Vendramin GG, Anzidei M, Madaghiele A, Bucci G (1998) Distribution of genetic diversity in Pinus pinaster Ait. as revealed by chloroplast microsatellites. Theor Appl Genet 97:456-463
    • (1998) Theor Appl Genet , vol.97 , pp. 456-463
    • Vendramin, G.G.1    Anzidei, M.2    Madaghiele, A.3    Bucci, G.4
  • 36
    • 0028043489 scopus 로고
    • Loss of all ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thunbergii
    • Wakasugi T, Tsudzuki J, Ito S, Nakashima K, Tsudzuki T, Sugiura M (1994) Loss of all ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thunbergii. Proc Natl Acad Sci USA 91:9794-9798
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 9794-9798
    • Wakasugi, T.1    Tsudzuki, J.2    Ito, S.3    Nakashima, K.4    Tsudzuki, T.5    Sugiura, M.6
  • 37
    • 0033081919 scopus 로고    scopus 로고
    • A set of conserved PCR primers for the analysis of simple sequence repeat polymorphisms in chloroplast genomes of dicotyledonous angiosperms
    • Weising K, Gardner RC (1999) A set of conserved PCR primers for the analysis of simple sequence repeat polymorphisms in chloroplast genomes of dicotyledonous angiosperms. Genome 42:9-19
    • (1999) Genome , vol.42 , pp. 9-19
    • Weising, K.1    Gardner, R.C.2
  • 38
    • 0020457269 scopus 로고
    • Population structure, genic diversity, and morphological variation in Pinus contorta Dougl.
    • Wheeler NC, Guries RP (1982) Population structure, genic diversity, and morphological variation in Pinus contorta Dougl. Can J For Res 12:595-606
    • (1982) Can J For Res , vol.12 , pp. 595-606
    • Wheeler, N.C.1    Guries, R.P.2
  • 39
    • 0031669749 scopus 로고    scopus 로고
    • Genealogical inference from microsatellite data
    • Wilson IJ, Balding DJ (1998) Genealogical inference from microsatellite data. Genetics 150:499-510
    • (1998) Genetics , vol.150 , pp. 499-510
    • Wilson, I.J.1    Balding, D.J.2
  • 40
    • 0029199934 scopus 로고
    • Genetic architecture and adaptive landscape of interior lodgepole pine (Pinus contorta ssp. latifolia) in Canada
    • Xie C-Y, Ying CC (1995) Genetic architecture and adaptive landscape of interior lodgepole pine (Pinus contorta ssp. latifolia) in Canada. Can J For Res 25:2010-2021
    • (1995) Can J For Res , vol.25 , pp. 2010-2021
    • Xie, C.-Y.1    Ying, C.C.2
  • 42
    • 0000096257 scopus 로고
    • The organization of genetic variability in central and marginal populations of lodgepole pine Pinus contorta spp. latifolia
    • Yeh FC, Layton C (1979) The organization of genetic variability in central and marginal populations of lodgepole pine Pinus contorta spp. latifolia. Can J Genet Cytol 21:487-503
    • (1979) Can J Genet Cytol , vol.21 , pp. 487-503
    • Yeh, F.C.1    Layton, C.2
  • 43
    • 0001673614 scopus 로고
    • Population differentiation in lodgepole pine, Pinus contorta spp. latifolia: A discriminant analysis of allozyme variation
    • Yeh FC, Cheliak WM, Dancik BP, Illingworth K, Trust DC, Pryhitka BA (1985) Population differentiation in lodgepole pine, Pinus contorta spp. latifolia: A discriminant analysis of allozyme variation. Can J Genet Cytol 27:210-218
    • (1985) Can J Genet Cytol , vol.27 , pp. 210-218
    • Yeh, F.C.1    Cheliak, W.M.2    Dancik, B.P.3    Illingworth, K.4    Trust, D.C.5    Pryhitka, B.A.6
  • 44
    • 0000380946 scopus 로고
    • Performance of lodgepole pine provenances at sites in southwestern British Columbia
    • Ying CC (1991) Performance of lodgepole pine provenances at sites in southwestern British Columbia. Silvae Genet 40:215-223
    • (1991) Silvae Genet , vol.40 , pp. 215-223
    • Ying, C.C.1
  • 45
    • 0028552508 scopus 로고
    • Geographic pattern of adaptive variation of lodgepole pine (Pinus contorta Dougl.) within the species' coastal range: Field performance at age 20 years
    • Ying CC, Liang Q (1994) Geographic pattern of adaptive variation of lodgepole pine (Pinus contorta Dougl.) within the species' coastal range: Field performance at age 20 years. For Ecol Man 67:281-298
    • (1994) For Ecol Man , vol.67 , pp. 281-298
    • Ying, C.C.1    Liang, Q.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.