Autosomal and X chromosome Alu insertions in Bolivian Aymaras and Quechuas: Two languages and one genetic pool

American Journal of Human Biology

Volumn 22, Issue 2, 2010, Pages 154-162

  Gayá Vidal, Magdalena ^a,b   Dugoujon, Jean Michel ^b   Esteban, Esther ^a   Athanasiadis, Georgios ^a   Rodríguez, Armando ^c   Villena, Mercedes ^c   Vasquez, René ^c   Moral, Pedro ^a  

^a UNIVERSITY OF BARCELONA   (Spain)

^b UNIVERSITÉ DE TOULOUSE   (France)

^c Instituto Boliviano de Biologia de Altura   (Bolivia)

Author keywords

[No Author keywords available]

Indexed keywords

ALU SEQUENCE; AMERICAN INDIAN; ARTICLE; BOLIVIA; ETHNOLOGY; FEMALE; GENE EXPRESSION REGULATION; GENE FREQUENCY; GENE POOL; GENETIC POLYMORPHISM; GENETICS; HUMAN; LANGUAGE; MALE; MIGRATION; X CHROMOSOME;

ALU ELEMENTS; BOLIVIA; CHROMOSOMES, HUMAN, X; EMIGRATION AND IMMIGRATION; FEMALE; GENE FREQUENCY; GENE POOL; HUMANS; INDIANS, SOUTH AMERICAN; MALE; MULTILINGUALISM; MUTAGENESIS, INSERTIONAL; POLYMORPHISM, GENETIC;

AYMARA;

EID: 77249153157     PISSN: 10420533     EISSN: 15206300     Source Type: Journal    
DOI: 10.1002/ajhb.20967     Document Type: Article

References (48)

1. Antunez-de-Mayolo G, Antunez-de-Mayolo A, Antunez-de-Mayolo P, Papiha SS, Hammer M, Yunis JJ, Yunis EJ, Damodaran C, Martinez de Pancorbo M, Caeiro JL, Puzyrev VP, Herrera RJ. 2002. Phylogenetics of worldwide human populations as determined by polymorphic Alu insertions. Electrophoresis 23:3346-3356.
2. Athanasiadis G, Esteban E, Via M, Dugoujon JM, Moschonas N, Chaabani H, Moral P. 2007. The X chromosome Alu insertions as a tool for human population genetics: data from European and African human groups. Eur J Hum Genet 15:578-583.
3. Battilana J, Bonatto SL, Freitas LB, Hutz MH, Weimer TA, Callegari-Jacques SM, Batzer MA, Hill K, Hurtado AM, Tsuneto LT, Petzl-Erler ML, Salzano FM. 2002. Alu insertions versus blood group plus protein genetic variability in four Amerindian populations. Ann Hum Biol 29:334-347.
4. Battilana J, Fagundes NJ, Heller AH, Goldani A, Freitas LB, TarazonaSantos E, Munkhbat B, Munkhtuvshin N, Krylov M, Benevolenskaia L, Arnett FC, Batzer MA, Deininger PL, Salzano FM, Bonatto SL. 2006. Alu insertion polymorphisms in Native Americans and related Asian populations. Ann Hum Biol 33:142-160.
5. Belle EM, Barbujani G. 2007. Worldwide analysis of multiple microsatellites: language diversity has a detectable influence on DNA diversity. Am J Phys Anthropol 133:1137-1146.
6. Bouysse-Cassagne T. 1986. Urco and Uma: Aymara concepts of space. In: Murra JV, Wachtel N, Revel J, editors. Anthropological history of Andean polities. Cambridge: Cambridge University Press. p 201-227.
7. Browman DL. 1994. Titicaca Basin archaeolinguistics: Uru, Pukina and Aymara AD 750-1450. World Archaeol 26:235-251.
8. Callinan PA, Hedges DJ, Salem AH, Xing J, Walker JA, Garber RK, Watkins WS, Bamshad MJ, Jorde LB, Batzer MA. 2003. Comprehensive analysis of Alu-associated diversity on the human sex chromosomes. Gene 317:103-110.
9. Carroll ML, Roy-Engel AM, Nguyen SV, Salem AH, Vogel E, Vincent B, Myers J, Ahmad Z, Nguyen L, Sammarco M, Watkins WS, Henke J, Makalowski W, Jorde LB, Deininger PL, Batzer MA. 2001. Large-scale analysis of the Alu Ya5 and Yb8 subfamilies and their contribution to human genomic diversity. J Mol Biol 311:17-40.
10. Cavalli-Sforza LL, Minch E, Mountain JL. 1992. Coevolution of genes and languages revisited. Proc Natl Acad Sci USA 89:5620.
11. Cerron-Palomino R. 2003. Lingü ística Quechua. Centro Bartolomé de las Casas: Cuzco, Peru.
12. Cordaux R, Srikanta D, Lee J, Stoneking M, Batzer MA. 2007. In search of polymorphic Alu insertions with restricted geographic distributions. Genomics 90:154-158.
13. Corella A, Bert F, Pérez-Pérez A, Gené M, Turbón D. 2007. Mitochondrial DNA diversity of the Amerindian populations living in the Andean Piedmont of Bolivia: Chimane, Moseten, Aymara and Quechua. Ann Hum Biol 34:34-55.
14. Crognier E, Villena M, Vargas E. 2002. Helping patterns and reproductive success in Aymara communities. Am J Hum Biol 14:372-379.
15. Dornelles CL, Battilana J, Fagundes NJ, Freitas LB, Bonatto SL, Salzano FM. 2004. Mitochondrial DNA and Alu insertions in a genetically peculiar population: the Ayoreo Indians of Bolivia and Paraguay. Am J Hum Biol 16:479-488.
16. Fabre A. 2005. Diccionario etnolingü ístico y guía bibliográfica de los pueblos indígenas sudamericanos.
17. Fagundes NJR, Bonatto SL, Callegari-Jacques SM, Salzano FM. 2002. Genetic, geographic, and linguistic variation among South American Indians: possible sex influence. Am J Phys Anthropol 117:68-78.
18. Fuselli S, Tarazona-Santos E, Dupanloup I, Soto A, Luiselli D, Pettener D. 2003. Mitochondrial DNA diversity in South America and the genetic history of Andean highlanders. Mol Biol Evol 20:1682-1691.
19. Gonzalez-Perez E, Via M, Esteban E, López-Alomar A, Mazieres S, Harich N, Kandil M, Dugoujon JM, Moral P. 2003. Alu insertions in the Iberian Peninsula and North West Africa-genetic boundaries or melting pot? Coll Antropol 27:491-500.
20. Gonzalez-Perez E, Esteban E, Via M, García-Moro C, Hernández M, Moral P. 2006. Genetic change in the polynesian population of Easter Island: evidence from Alu insertion polymorphisms. Ann Hum Genet 70:829-840.
21. Greenberg JH. 1987. Language in the Americas. Stanford: Stanford University Press.
22. Hunley KL, Cabana GS, Merriwether DA, Long JC. 2007. A formal test of linguistic and genetic coevolution in Native Central and South America. Am J Phys Anthropol 132:622-631.
23. Kolata A. 1993. The Tiwanaku: portrait of an Andean civilization. The people of America. Cambridge: Blackwell Publishers.
24. Lewis CM, Long JC. 2008. Native South American genetic structure and prehistory inferred from hierarchical modelling of mtDNA. Mol Biol Evol 25:478-486.
25. Lewis CM, Lizarraga B, Tito RY, Lopez PW, Iannacone C, Medina A, Martinez R, Polo SI, De La Cruz AF, Caceres AM, Stone AC. 2007. Mitochondrial DNA and the peopling of South America. Hum Biol 79:159-178.
26. Luiselli D, Simoni L, Tarazona-Santos E, Pastor S, Pettener D. 2000. Genetic structure of Quechua-speakers of the Central Andes and geographic patterns of gene frequencies in South Amerindian populations. Am J Phys Anthropol 113:5-17.
27. Mateus-Pereira LH, Socorro A, Fernandez I, Masleh M, Vidal D, Bianchi NO, Bonatto SL, Salzano FM, Herrera RJ. 2005. Phylogenetic information in polymorphic L1 and Alu insertions from East Asians and Native American populations. Am J Phys Anthropol 128:171-184.
28. Merriwether DA, Rothhammer F, Ferrell RE. 1995. Distribution of the four founding lineage haplotypes in Native Americans suggests a single wave of migration for the New World. Am J Phys Anthropol 98:411-430.
29. Moral P, Marogna G, Salis M, Succa V, Vona G. 1994. Genetic data on Alghero population (Sardinia): contrast between biological and cultural evidence. Am J Phys Anthropol 93:441-453.
30. Nei M. 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89:583-590.
31. Novick GE, Novick CC, Yunis J, Yunis E, Antunez-de-Mayolo P, Scheer WD, Deininger PL, Stoneking M, York DS, Batzer MA, Herrera RJ. 1998. Polymprphic Alu insertions and the Asian origin of Native American populations. Hum Biol 70:23-39.
32. Platt T, Bouysse-Cassagne T, Harris O. 2006. Qaraqara-Charka, Mallku, Inka y Rey en la provincia de Charcas (siglos XV-XVII). Historia antropolo ́gica de una confederación aymara. Institut français détudes andines-IFEA; Plural editores; University of St. Andrews; University of London; Interamerican Foundation; Fundación Cultural del Banco Central de Bolivia, La Paz.
33. Raymond M, Rousset F. 1995. GENEPOP version 1.2: population genetics software for exact tests and ecumenicism. J Hered 86:248-249.
34. Resano M, Esteban E, González-Pérez E, Vía M, Athanasiadis G, Avena S, Goicoechea A, Bartomioli M, Fernández V, Cabrera A, Dejean C, Carnese F, Moral P. 2007. How many populations set foot through the Patagonian door? Genetic composition of the current population of Bahía Blanca (Argentina) based on data from 19 Alu polymorphisms. Am J Hum Biol 19:827-835.
35. Reynolds J, Weir BS, Cockerham CC. 1983. Estimation of the coancestry coefficient: basis for a short-term genetic distance. Genetics 105:767-779.
36. Rowe JH. 1963. Inca culture at the time of the Spanish conquest. In: Steward JH, editor. Handbook of South American Indians, Vol.2. New York: Cooper Square. p 183-330.
37. Roy AM, Carroll ML, Kass DH, Nguyen SV, Salem AH, Batzer MA, Deininger PL. 1999. Recently integrated human Alu repeats: finding needles in the haystack. Genetica 107:149-161.
38. Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425.
39. Sandoval J, Delgado B, Rivas L, Bonilla B, Nugent D, Fujita R. 2004. Variants of mtDNA among islanders of the lake Titicaca: highest frequency of haplotype B1 and evidence of founder effect. Rev Peru Biol 11:161-168.
40. Schneider S, Roessli D, Excoffier L. 2000. Arlequin: a software for population genetics data analysis. Ver 2.000. Genetics and Biometry Laboratory, Department of Anthropology, University of Geneva.
41. Stanish C. 2001. The origin of state societies in South America. Annu Rev Anthropol 30:41-64.
42. Stoneking M, Fontius JJ, Clifford SL, Soodyall H, Arcot SS, Saha N, Jenkins T, Tahir MA, Deininger PL, Batzer MA. 1997. Alu insertion polymorphisms and human evolution: evidence for a larger population size in Africa. Genome Res 7:1061-1071.
43. Tarazona-Santos E, Carvalho-Silva DR, Pettener D, Luiselli D, De Stefano GF Labarga CM, Rickards O, Tyler-Smith C, Pena SD, Santos FR. 2001. Genetic differentiation in South Amerindians is related to environmental and cultural diversity: evidence from the Y chromosome. Am J Hum Genet 68:1485-1496.
44. Tishkoff SA, Dietzsch E, Speed W, Pakstis AJ, Kidd JR, Cheung K, BonnéTamir B, Santachiara-Benerecetti AS, Moral P, Krings M, Pääbo S, Watson E, Risch N, Jenkins T, Kidd KK. 1996. Global patterns of linkage disequilibrium at the CD4 locus and modern humans origins. Science 271:1380-1387.
45. Tishkoff SA, Goldman A, Calafell F, Speed WC, Deinard AS, Bonne-Tamir B, Kidd JR, Pakstis AJ, Jenkins T, Kidd KK. 1998. A global haplotype analysis of the myotonic dystrophy locus: implications for the evolution of modern humans and for the origin of myotonic dystrophy mutations. Am J Hum Genet 62:1389-1402.
46. Tschopik H. 1963. The Aymara. In: Steward JH, editor. Handbook of South American Indians, Vol.2. New York: Cooper Square. p 501-573.
47. Wang S, Lewis CM Jr, Jakobsson M, Ramachandran S, Ray N, Bedoya G, Rojas W, Parra MV, Molina JA, Gallo C, Mazzotti G, Poletti G, Hill K, Hurtado AM, Labuda D, Klitz W, Barrantes R, Bortolini MC, Salzano FM, Petzl-Erler ML, Tsunedo LT, Llop E, Rothhammer F, Excoffier L, Feldman MW, Rosenberg NA, Ruiz-Linares A. 2007. Genetic variation and population structure in Native Americans. PLoS Genet 3:e185.
48. Watkins WS, Rogers AR, Ostler CT, Wooding S, Bamshad MJ, Brassington AM, Carroll ML, Nguyen SV, Walker JA, Prasad BV, Reddy PG, Das PK, Batzer MA, Jorde LB. 2003. Genetic variation among world populations: inferences from 100 Alu insertion polymorphisms. Genome Res 13:1607-1618.