Rate of adaptation of large populations

Evolutionary Biology from Concept to Application

Volumn , Issue , 2008, Pages 3-27

  Yu, Feng ^a   Etheridge, Alison ^b  

^a UNIVERSITY OF BRISTOL   (United Kingdom)

^b UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 77249137355     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-3-540-78993-2_1     Document Type: Chapter

References (24)

1. Barton NH, Coe JB (2007) An upper limit to the rate of adaptation. Preprint
2. Cuthbertson C, Etheridge AM, Yu F (2007) Asymptotic behaviour of the rate of adaptation. arXiv:0708.3453
3. Dawson DA (1993) Measure-valued Markov processes. In: école d'été de Probabilités de Saint-Flour XXI-1991. Lecture notes in mathematics, vol 1541. Springer, Berlin, pp 1-260
4. Desai MM, Fisher DS (2007) Beneficial mutation selection balance and the effect of linkage on positive selection. Genetics 176:1759-1798
5. Donnelly P, Kurtz TG (1999) Genealogical processes for Fleming-Viot models with selection and recombination. Ann Appl Probab 9(4):1091-1148
6. Etheridge AM, Pfaffelhuber P, Wakolbinger A (2007) How often does the ratchet click? Facts, heuristics, asymptotics. Trends Stochastic Anal. arXiv:0709.2775v1
7. Etheridge AM (2000) An introduction to superprocesses. University lecture series, vol 20. American Mathematical Society, Providence
8. Fisher RA (1930) The genetical theory of natural selection. Clarendon, Oxford
9. Gerrish PJ, Lenski RE (1998) The fate of competing beneficial mutations in an asexual population. Genetica 102/103:127-144
10. Gillespie JH (1991) The causes of molecular evolution. Oxford University Press, Oxford
11. Gordo I, Charlesworth B (2000) On the speed of Muller's ratchet. Genetics 156:2137-2140
12. Haigh J (1978) The accumulation of deleterious genes in a population. Theor Popul Biol 14(2):251-267
13. Haldane JBS (1927) A mathematical theory of natural and artificial selection, part V: selection and mutation. Proc Camb Philos Soc 23:834-844
14. Hegreness M, Shoresh N, Hartl D, Kishony R (2006) An equivalence principle for the incorporation of favourable mutations in asexual populations. Science 311:1615-1617
15. Higgs P, Woodcock G (1995) The accumulation of mutations in asexual populations, and the structure of genealogical trees in the presence of selection. J Math Biol 33:677-702
16. Ikeda N, Watanabe S (1981) Stochastic differential equations and diffusion processes. North-Holland mathematics library. North-Holland, Amsterdam
17. Karatzas I, Shreve SE (1991) Brownian motion and stochastic calculus, 2nd edn. Graduate texts in mathematics, vol 113. Springer, New York
18. Novella IS, Elena SF, Moya A, Domingo E, Holland JJ (1995) Size of genetic bottlenecks leading to virus fitness loss is determined by mean initial population fitness. J Virol 69:2869-2872
19. Novella IS, Elena SF, Moya A, Domingo E, Holland JJ (1999) Exponential fitness gains of RNA virus populations are limited by bottleneck effects. J Virol 73:1668-1671
20. Rouzine I, Brunet E, Wilke CO (2007) The traveling wave approach to asexual evolution: Muller's ratchet and speed of adaptation. arXiv:0707.3469
21. Rouzine I, Wakeley J, Coffin JM (2003) The solitary wave of asexual evolution. Proc Natl Acad Sci USA 100(2):587-592
22. Shiga T (1982) Wandering phenomena in infinite-allelic diffusion models. Adv Appl Probab 14(3):457-483
23. Stephan W, Chao L, Smale J (1993) The advance of Muller's ratchet in a haploid asexual population: approximate solution based on diffusion theory. Genet Res 61:225-232
24. Wilke CO (2004) The speed of adaptation in large asexual populations. Genetics 167:2045-2054