메뉴 건너뛰기




Volumn 167, Issue 4, 2004, Pages 2045-2053

The speed of adaptation in large asexual populations

Author keywords

[No Author keywords available]

Indexed keywords

ADAPTATION; ANALYTIC METHOD; ARTICLE; ASEXUAL REPRODUCTION; COMPUTER SIMULATION; DENSITY; GENE MUTATION; MATHEMATICAL ANALYSIS; MEASUREMENT; POPULATION DYNAMICS; PRIORITY JOURNAL;

EID: 4644276948     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: 10.1534/genetics.104.027136     Document Type: Article
Times cited : (115)

References (46)
  • 1
    • 0029040245 scopus 로고
    • Linkage and the limits to natural selection
    • BARTON, N. H., 1995 Linkage and the limits to natural selection. Genetics 140: 821-841.
    • (1995) Genetics , vol.140 , pp. 821-841
    • Barton, N.H.1
  • 2
    • 0034035485 scopus 로고    scopus 로고
    • Big-benefit mutations in a bacteriophage inhibited with heat
    • BULL, J. J., M. R. BADGETT and H. A. WICHMAN, 2000 Big-benefit mutations in a bacteriophage inhibited with heat. Mol. Biol. Evol. 17: 942-950.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 942-950
    • Bull, J.J.1    Badgett, M.R.2    Wichman, H.A.3
  • 3
    • 1542547939 scopus 로고    scopus 로고
    • Fixation of beneficial mutations in the presence of epistatic interactions
    • CAMPOS, P. R. A., 2004 Fixation of beneficial mutations in the presence of epistatic interactions. Bull. Math. Biol. 66: 473-486.
    • (2004) Bull. Math. Biol. , vol.66 , pp. 473-486
    • Campos, P.R.A.1
  • 4
    • 0000749335 scopus 로고
    • Evolution in sexual and asexual populations
    • CROW, J. F., and M. KIMURA, 1965 Evolution in sexual and asexual populations. Am. Nat. 99: 439-450.
    • (1965) Am. Nat. , vol.99 , pp. 439-450
    • Crow, J.F.1    Kimura, M.2
  • 6
    • 0032748221 scopus 로고    scopus 로고
    • Rate of deleterious mutation and the distribution of its effects on fitness in vesicular stomatitis virus
    • ELENA, S. F., and A. MOYA, 1999 Rate of deleterious mutation and the distribution of its effects on fitness in vesicular stomatitis virus. J. Evol. Biol. 12: 1078-1088.
    • (1999) J. Evol. Biol. , vol.12 , pp. 1078-1088
    • Elena, S.F.1    Moya, A.2
  • 7
    • 0016110957 scopus 로고
    • The evolutionary advantage of recombination
    • FELSENSTEIN, J., 1974 The evolutionary advantage of recombination. Genetics 78: 737-756.
    • (1974) Genetics , vol.78 , pp. 737-756
    • Felsenstein, J.1
  • 8
    • 0030008572 scopus 로고    scopus 로고
    • Spontaneous mutational variances and covariances for fitness-related traits in Drosophila melanogaster
    • FERNÁNDEZ, J., and C. LÓPEZ-FANJUL, 1996 Spontaneous mutational variances and covariances for fitness-related traits in Drosophila melanogaster. Genetics 143: 829-837.
    • (1996) Genetics , vol.143 , pp. 829-837
    • Fernández, J.1    López-Fanjul, C.2
  • 9
    • 0343247818 scopus 로고    scopus 로고
    • The rate and effects distribution of viable mutation in Drosophila: Minimum distance estimation
    • GARCÍA-DORADO, A., 1997 The rate and effects distribution of viable mutation in Drosophila: minimum distance estimation. Evolution 51: 1130-1139.
    • (1997) Evolution , vol.51 , pp. 1130-1139
    • García-Dorado, A.1
  • 10
    • 0035921922 scopus 로고    scopus 로고
    • The rhythm of microbial adaptation
    • GERRISH, P., 2001 The rhythm of microbial adaptation. Nature 413: 299-302.
    • (2001) Nature , vol.413 , pp. 299-302
    • Gerrish, P.1
  • 11
    • 2542583245 scopus 로고    scopus 로고
    • The fate of competing beneficial mutations in an asexual population
    • GERRISH, P. J., and R. E. LENSKI, 1998 The fate of competing beneficial mutations in an asexual population. Genetica 102/103: 127-144.
    • (1998) Genetica , vol.102-103 , pp. 127-144
    • Gerrish, P.J.1    Lenski, R.E.2
  • 12
    • 0020740521 scopus 로고
    • A simple stochastic gene substitution model
    • GILLESPIE, J. H., 1983 A simple stochastic gene substitution model. Theor. Popul. Biol. 23: 202-215.
    • (1983) Theor. Popul. Biol. , vol.23 , pp. 202-215
    • Gillespie, J.H.1
  • 14
    • 0034090232 scopus 로고    scopus 로고
    • The degeneration of asexual haploid populations and the speed of Muller's ratchet
    • GORDO, I., and B. CHARLESWORTH, 2000 The degeneration of asexual haploid populations and the speed of Muller's ratchet. Genetics 154: 1379-1387.
    • (2000) Genetics , vol.154 , pp. 1379-1387
    • Gordo, I.1    Charlesworth, B.2
  • 15
    • 0018029597 scopus 로고
    • The accumulation of deleterious genes in a population-Muller's ratchet
    • HAIGH, J., 1978 The accumulation of deleterious genes in a population-Muller's ratchet. Theor. Popul. Biol. 14: 251-267.
    • (1978) Theor. Popul. Biol. , vol.14 , pp. 251-267
    • Haigh, J.1
  • 16
    • 0013979181 scopus 로고
    • The effect of linkage on limits to artificial selection
    • HILL, W. G., and A. ROBERTSON, 1966 The effect of linkage on limits to artificial selection. Genet. Res. 8: 269-294.
    • (1966) Genet. Res. , vol.8 , pp. 269-294
    • Hill, W.G.1    Robertson, A.2
  • 17
    • 0035970061 scopus 로고    scopus 로고
    • Fitness effects of advantageous mutations in evolving Escherichia coli populations
    • IMHOF, M., and C. SCHLÖTTERER, 2001 Fitness effects of advantageous mutations in evolving Escherichia coli populations. Proc. Natl. Acad. Sci. USA 98: 1113-1117.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 1113-1117
    • Imhof, M.1    Schlötterer, C.2
  • 18
    • 0344552300 scopus 로고    scopus 로고
    • Evolutionary dynamics of invasion and escape
    • IWASA, Y., F. MICHOK and M. A. NOWAK, 2004 Evolutionary dynamics of invasion and escape. J. Theor. Biol. 226: 205-214.
    • (2004) J. Theor. Biol. , vol.226 , pp. 205-214
    • Iwasa, Y.1    Michok, F.2    Nowak, M.A.3
  • 19
    • 0036741701 scopus 로고    scopus 로고
    • The effect of deleterious alleles on adaptation in asexual populations
    • JOHNSON, T., and N. H. BARTON, 2002 The effect of deleterious alleles on adaptation in asexual populations. Genetics 162: 395-411.
    • (2002) Genetics , vol.162 , pp. 395-411
    • Johnson, T.1    Barton, N.H.2
  • 20
    • 0030469972 scopus 로고    scopus 로고
    • Nature of deleterious mutation load in Drosophila
    • KEIGHTLEY, P. D., 1996 Nature of deleterious mutation load in Drosophila. Genetics 144: 1993-1999.
    • (1996) Genetics , vol.144 , pp. 1993-1999
    • Keightley, P.D.1
  • 21
    • 0030976617 scopus 로고    scopus 로고
    • Genomic mutation rates for lifetime reproductive output and lifespan in Caenorhabditis elegans
    • KEIGHTLEY, P. D., and A. CABALLERO, 1997 Genomic mutation rates for lifetime reproductive output and lifespan in Caenorhabditis elegans. Proc. Natl. Acad. Sci. USA 94: 3823-3827.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 3823-3827
    • Keightley, P.D.1    Caballero, A.2
  • 22
    • 0029931416 scopus 로고    scopus 로고
    • Estimate of the genomic mutation rate deleterious to overall fitness in E. coli
    • KIBOTA, T. T., and M. LYNCH, 1996 Estimate of the genomic mutation rate deleterious to overall fitness in E. coli. Nature 381: 694-696.
    • (1996) Nature , vol.381 , pp. 694-696
    • Kibota, T.T.1    Lynch, M.2
  • 23
    • 0035695235 scopus 로고    scopus 로고
    • Profiles of adaptation in two similar viruses
    • KICHLER HOLDER, K., and J. J. BULL, 2001 Profiles of adaptation in two similar viruses. Genetics 159: 1393-1404.
    • (2001) Genetics , vol.159 , pp. 1393-1404
    • Kichler Holder, K.1    Bull, J.J.2
  • 24
    • 0038192127 scopus 로고    scopus 로고
    • Selective sweeps in the presence of interference among partially linked loci
    • KIM, Y., and W. STEPHAN, 2003 Selective sweeps in the presence of interference among partially linked loci. Genetics 164: 389-398.
    • (2003) Genetics , vol.164 , pp. 389-398
    • Kim, Y.1    Stephan, W.2
  • 26
    • 0029816202 scopus 로고    scopus 로고
    • Multi-locus selection and the structure of variation at the white gene of Drosophila melanogaster
    • KIRBY, D. A., and W. STEPHAN, 1996 Multi-locus selection and the structure of variation at the white gene of Drosophila melanogaster. Genetics 144: 635-645.
    • (1996) Genetics , vol.144 , pp. 635-645
    • Kirby, D.A.1    Stephan, W.2
  • 27
    • 0034099647 scopus 로고    scopus 로고
    • The effects of Hill-Robertson interference between weakly selected mutations on patterns of molecular evolution and variation
    • MCVEAN, G. A. T., and B. CHARLESWORTH, 2000 The effects of Hill-Robertson interference between weakly selected mutations on patterns of molecular evolution and variation. Genetics 155: 929-944.
    • (2000) Genetics , vol.155 , pp. 929-944
    • McVean, G.A.T.1    Charlesworth, B.2
  • 28
    • 0033543602 scopus 로고    scopus 로고
    • Clonal interference and the evolution of RNA viruses
    • MIRALLES, R., P. J. GERRISH, A. MOYA and S. F. ELENA, 1999 Clonal interference and the evolution of RNA viruses. Science 285: 1745-1747.
    • (1999) Science , vol.285 , pp. 1745-1747
    • Miralles, R.1    Gerrish, P.J.2    Moya, A.3    Elena, S.F.4
  • 29
    • 0034026084 scopus 로고    scopus 로고
    • Diminishing returns of population size in the rate of RNA virus adaptation
    • MIRALLES, R., A. MOYA and S. F. ELENA, 2000 Diminishing returns of population size in the rate of RNA virus adaptation. J. Virol. 74: 3566-3571.
    • (2000) J. Virol. , vol.74 , pp. 3566-3571
    • Miralles, R.1    Moya, A.2    Elena, S.F.3
  • 30
    • 0015405272 scopus 로고
    • Mutation rate and dominance of genes affecting viability in Drosophila melanogaster
    • MUKAI, T., S. I. CHIGUSA, L. E. METTLER and J. F. CROW, 1972 Mutation rate and dominance of genes affecting viability in Drosophila melanogaster. Genetics 72: 335-355.
    • (1972) Genetics , vol.72 , pp. 335-355
    • Mukai, T.1    Chigusa, S.I.2    Mettler, L.E.3    Crow, J.F.4
  • 31
    • 50549201557 scopus 로고
    • The relation of recombination to mutational advance
    • MULLER, H. J., 1964 The relation of recombination to mutational advance. Mutat. Res. 1: 2-9.
    • (1964) Mutat. Res. , vol.1 , pp. 2-9
    • Muller, H.J.1
  • 32
    • 0029072721 scopus 로고
    • Exponential increases of RNA virus fitness during large population transmissions
    • NOVELLA, I. S., E. A. DUARTE, S. F. ELENA, A. MOYA, E. DOMINGO et al, 1995 Exponential increases of RNA virus fitness during large population transmissions. Proc. Natl. Acad. Sci. USA 92: 5841-5844.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 5841-5844
    • Novella, I.S.1    Duarte, E.A.2    Elena, S.F.3    Moya, A.4    Domingo, E.5
  • 33
    • 0017661155 scopus 로고
    • Spontaneous and ethyl methanesulfonate-induced mutations controlling viability in Drosophila melanogaster. II. Homozygous effect of polygenic mutations
    • OHNISHI, O., 1977 Spontaneous and ethyl methanesulfonate-induced mutations controlling viability in Drosophila melanogaster. II. Homozygous effect of polygenic mutations. Genetics 87: 529-545.
    • (1977) Genetics , vol.87 , pp. 529-545
    • Ohnishi, O.1
  • 34
    • 0342657165 scopus 로고    scopus 로고
    • The rate of adaptation in asexuals
    • ORR, H. A., 2000 The rate of adaptation in asexuals. Genetics 155: 961-968.
    • (2000) Genetics , vol.155 , pp. 961-968
    • Orr, H.A.1
  • 35
    • 0037398394 scopus 로고    scopus 로고
    • The distribution of fitness effects among beneficial mutations
    • ORR, H. A., 2003 The distribution of fitness effects among beneficial mutations. Genetics 163: 1519-1526.
    • (2003) Genetics , vol.163 , pp. 1519-1526
    • Orr, H.A.1
  • 36
    • 0031731778 scopus 로고    scopus 로고
    • An adaptive hypothesis for the evolution of the Y chromosome
    • ORR, H. A., and Y. KIM, 1998 An adaptive hypothesis for the evolution of the Y chromosome. Genetics 150: 1693-1698.
    • (1998) Genetics , vol.150 , pp. 1693-1698
    • Orr, H.A.1    Kim, Y.2
  • 37
    • 0034536680 scopus 로고    scopus 로고
    • Detecting the undetected: Estimating the total number of loci underlying a quantitative trait
    • OTTO, S. P., and C. D. JONES, 2000 Detecting the undetected: estimating the total number of loci underlying a quantitative trait. Genetics 156: 2093-2107.
    • (2000) Genetics , vol.156 , pp. 2093-2107
    • Otto, S.P.1    Jones, C.D.2
  • 38
    • 0037172667 scopus 로고    scopus 로고
    • Fitness effects of fixed beneficial mutations in microbial populations
    • ROZEN, D. E., J. A. G. M. DE VISSER and P. J. GERRISH, 2002 Fitness effects of fixed beneficial mutations in microbial populations. Curr. Biol. 12: 1040-1045.
    • (2002) Curr. Biol. , vol.12 , pp. 1040-1045
    • Rozen, D.E.1    De Visser, J.A.G.M.2    Gerrish, P.J.3
  • 39
    • 0030725502 scopus 로고    scopus 로고
    • Rapid decline of fitness in panmictic populations of Drosophila melanogaster maintained under relaxed natural selection
    • SHABALINA, S. A., and L. Y. Y. A. S. KONDRASHOV, 1997 Rapid decline of fitness in panmictic populations of Drosophila melanogaster maintained under relaxed natural selection. Proc. Natl. Acad. Sci. USA 94: 13034-13039.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 13034-13039
    • Shabalina, S.A.1    Kondrashov, L.Y.Y.A.S.2
  • 40
    • 0029437854 scopus 로고
    • Perturbation analysis of a 2-locus model with directional selection and recombination
    • STEPHAN, W., 1995 Perturbation analysis of a 2-locus model with directional selection and recombination. J. Math. Biol. 34: 95-109.
    • (1995) J. Math. Biol. , vol.34 , pp. 95-109
    • Stephan, W.1
  • 42
    • 0033575348 scopus 로고    scopus 로고
    • Different trajectories of parallel evolution during viral adaptation
    • WICHMAN, H. A., M. R. BADGETT, L. A. SCOTT, C. M. BOULIANNE and J. J. BULL, 1999 Different trajectories of parallel evolution during viral adaptation. Science 285: 422-424.
    • (1999) Science , vol.285 , pp. 422-424
    • Wichman, H.A.1    Badgett, M.R.2    Scott, L.A.3    Boulianne, C.M.4    Bull, J.J.5
  • 43
    • 0037295402 scopus 로고    scopus 로고
    • Probability of fixation of an advantageous mutant in a viral quasispecies
    • WILKE, C. O., 2003 Probability of fixation of an advantageous mutant in a viral quasispecies. Genetics 163: 467-474.
    • (2003) Genetics , vol.163 , pp. 467-474
    • Wilke, C.O.1
  • 44
    • 0037469371 scopus 로고    scopus 로고
    • Evolution of mutational robustness
    • WILKE, C. O., and C. ADAMI, 2003 Evolution of mutational robustness. Mutat. Res. 522: 3-11.
    • (2003) Mutat. Res. , vol.522 , pp. 3-11
    • Wilke, C.O.1    Adami, C.2
  • 45
    • 2942549839 scopus 로고    scopus 로고
    • Phenotypic mixing and hiding may contribute to memory in viral quasispecies
    • WILKE, C. O., and I. S. NOVELLA, 2003 Phenotypic mixing and hiding may contribute to memory in viral quasispecies. BMC Microbiol. 3: 11.
    • (2003) BMC Microbiol. , vol.3 , pp. 11
    • Wilke, C.O.1    Novella, I.S.2
  • 46
    • 0035913336 scopus 로고    scopus 로고
    • Evolution of digital organisms at high mutation rate leads to survival of the flattest
    • WILKE, C. O., J. L. WANG, C. OFRIA, R. E. LENSKI and C. ADAMI, 2001 Evolution of digital organisms at high mutation rate leads to survival of the flattest. Nature 412: 331-333.
    • (2001) Nature , vol.412 , pp. 331-333
    • Wilke, C.O.1    Wang, J.L.2    Ofria, C.3    Lenski, R.E.4    Adami, C.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.