메뉴 건너뛰기




Volumn 2, Issue , 2009, Pages

Evidence of the adaptive evolution of immune genes in chicken

Author keywords

[No Author keywords available]

Indexed keywords

AVES; TAENIOPYGIA GUTTATA;

EID: 77049100333     PISSN: None     EISSN: 17560500     Source Type: Journal    
DOI: 10.1186/1756-0500-2-254     Document Type: Article
Times cited : (15)

References (30)
  • 1
    • 10644283823 scopus 로고    scopus 로고
    • Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    • Chicken Genome Sequencing Consortium 10.1038/nature03154. 15592404
    • Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. International Chicken Genome Sequencing Consortium, Nature 2004 432 695 716 10.1038/nature03154 15592404
    • (2004) Nature , vol.432 , pp. 695-716
  • 2
    • 0041317004 scopus 로고    scopus 로고
    • Natural selection drives Drosophila immune system evolution
    • 12930753
    • Natural selection drives Drosophila immune system evolution. TA Schlenke DJ Begun, Genetics 2003 164 4 1471 80 12930753
    • (2003) Genetics , vol.164 , Issue.4 , pp. 1471-80
    • Schlenke, T.A.1    Begun, D.J.2
  • 3
    • 29144525031 scopus 로고    scopus 로고
    • High level of functional polymorphism indicates a unique role of natural selection at human immune system loci
    • 10.1007/s00251-005-0052-7. 16261383
    • High level of functional polymorphism indicates a unique role of natural selection at human immune system loci. AL Hughes B Packer R Welch SJ Chanock M Yeager, Immunogenetics 2005 57 11 821 7 10.1007/s00251-005-0052-7 16261383
    • (2005) Immunogenetics , vol.57 , Issue.11 , pp. 821-7
    • Hughes, A.L.1    Packer, B.2    Welch, R.3    Chanock, S.J.4    Yeager, M.5
  • 4
    • 34547645438 scopus 로고    scopus 로고
    • Molecular evolutionary genomics of birds
    • 10.1159/000103172. 17675852
    • Molecular evolutionary genomics of birds. H Ellegren, Cytogenet Genome Res 2007 117 1-4 120 30 10.1159/000103172 17675852
    • (2007) Cytogenet Genome Res , vol.117 , Issue.1-4 , pp. 120-30
    • Ellegren, H.1
  • 6
    • 33646884615 scopus 로고    scopus 로고
    • Strong regional biases in nucleotide substitution in the chicken genome
    • 10.1093/molbev/msk008. 16551647
    • Strong regional biases in nucleotide substitution in the chicken genome. MT Webster E Axelsson H Ellegren, Mol Biol Evol 2006 23 1203 16 10.1093/molbev/msk008 16551647
    • (2006) Mol Biol Evol , vol.23 , pp. 1203-16
    • Webster, M.T.1    Axelsson, E.2    Ellegren, H.3
  • 7
    • 34548021894 scopus 로고    scopus 로고
    • Isochore pattern and gene distribution in the chicken genome
    • 10.1016/j.gene.2007.05.025. 17629634
    • Isochore pattern and gene distribution in the chicken genome. M Costantini M Di Filippo F Auletta G Bernardi, Gene 2007 400 9 15 10.1016/j.gene.2007.05.025 17629634
    • (2007) Gene , vol.400 , pp. 9-15
    • Costantini, M.1    Di Filippo, M.2    Auletta, F.3    Bernardi, G.4
  • 8
    • 33947127751 scopus 로고    scopus 로고
    • Origin of avian genome size and structure in non-avian dinosaur
    • 10.1038/nature05621. 17344851
    • Origin of avian genome size and structure in non-avian dinosaur. CL Organ AM Shedlock A Meade M Pagel SV Edwards, Nature 2007 446 180 4 10.1038/nature05621 17344851
    • (2007) Nature , vol.446 , pp. 180-4
    • Organ, C.L.1    Shedlock, A.M.2    Meade, A.3    Pagel, M.4    Edwards, S.V.5
  • 9
    • 0029100668 scopus 로고
    • Small genomes for better flyers
    • 10.1038/377391a0. 7566113
    • Small genomes for better flyers. AL Hughes MK Hughes, Nature 1995 377 391 10.1038/377391a0 7566113
    • (1995) Nature , vol.377 , pp. 391
    • Hughes, A.L.1    Hughes, M.K.2
  • 10
    • 10644271562 scopus 로고    scopus 로고
    • A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms
    • Chicken Polymorphism Map Consortium 10.1038/nature03156. 15592405
    • A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms. International Chicken Polymorphism Map Consortium, Nature 2004 432 717 22 10.1038/nature03156 15592405
    • (2004) Nature , vol.432 , pp. 717-22
  • 14
    • 0027399530 scopus 로고
    • Identification of protein coding regions by database similarity search
    • 10.1038/ng0393-266. 8485583
    • Identification of protein coding regions by database similarity search. W Gish DJ States, Nat Genet 1993 3 266 72 10.1038/ng0393-266 8485583
    • (1993) Nat Genet , vol.3 , pp. 266-72
    • Gish, W.1    States, D.J.2
  • 15
    • 0034623005 scopus 로고    scopus 로고
    • T-Coffee. A novel method for fast and accurate multiple sequence alignment
    • 10.1006/jmbi.2000.4042. 10964570
    • T-Coffee. A novel method for fast and accurate multiple sequence alignment. C Notredame DG Higgins J Heringa, J Mol Biol 2000 302 1 205 17 10.1006/jmbi.2000.4042 10964570
    • (2000) J Mol Biol , vol.302 , Issue.1 , pp. 205-17
    • Notredame, C.1    Higgins, D.G.2    Heringa, J.3
  • 16
    • 33646886862 scopus 로고    scopus 로고
    • Isochore structures in the chicken genome
    • 10.1111/j.1742-4658.2006.05178.x. 16623701
    • Isochore structures in the chicken genome. F Gao CT Zhang, FEBS J 2006 273 1637 48 10.1111/j.1742-4658.2006.05178.x 16623701
    • (2006) FEBS J , vol.273 , pp. 1637-48
    • Gao, F.1    Zhang, C.T.2
  • 17
    • 0036889183 scopus 로고    scopus 로고
    • Inference of selection from multiple species alignments
    • 10.1016/S0959-437X(02)00348-9. 12433583
    • Inference of selection from multiple species alignments. Z Yang, Curr Opin Genet Dev 2002 12 688 94 10.1016/S0959-437X(02)00348-9 12433583
    • (2002) Curr Opin Genet Dev , vol.12 , pp. 688-94
    • Yang, Z.1
  • 18
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • 10.1038/351652a0. 1904993
    • Adaptive protein evolution at the Adh locus in Drosophila. JH McDonald M Kreitman, Nature 1991 351 6328 652 4 10.1038/351652a0 1904993
    • (1991) Nature , vol.351 , Issue.6328 , pp. 652-4
    • McDonald, J.H.1    Kreitman, M.2
  • 19
    • 0037186564 scopus 로고    scopus 로고
    • Adaptive protein evolution in Drosophila
    • 10.1038/4151022a. 11875568
    • Adaptive protein evolution in Drosophila. NG Smith A Eyre-Walker, Nature 2002 415 6875 1022 4 10.1038/4151022a 11875568
    • (2002) Nature , vol.415 , Issue.6875 , pp. 1022-4
    • Smith, N.G.1    Eyre-Walker, A.2
  • 20
    • 65349138349 scopus 로고    scopus 로고
    • Quantification of adaptive evolution of genes expressed in avian brain and the population size effect on the efficacy of selection
    • 10.1093/molbev/msp019. 19188264
    • Quantification of adaptive evolution of genes expressed in avian brain and the population size effect on the efficacy of selection. E Axelsson H Ellegren, Mol Biol Evol 2009 26 5 1073 9 10.1093/molbev/msp019 19188264
    • (2009) Mol Biol Evol , vol.26 , Issue.5 , pp. 1073-9
    • Axelsson, E.1    Ellegren, H.2
  • 21
    • 44849107389 scopus 로고    scopus 로고
    • Natural selection in avian protein-coding genes expressed in brain
    • 10.1111/j.1365-294X.2008.03795.x. 18482257
    • Natural selection in avian protein-coding genes expressed in brain. E Axelsson L Hultin-Rosenberg M Brandström M Zwahlén DF Clayton H Ellegren, Mol Ecol 2008 17 12 3008 17 10.1111/j.1365-294X.2008.03795.x 18482257
    • (2008) Mol Ecol , vol.17 , Issue.12 , pp. 3008-17
    • Axelsson, E.1    Hultin-Rosenberg, L.2    Brandström, M.3    Zwahlén, M.4    Clayton, D.F.5    Ellegren, H.6
  • 22
    • 59449103500 scopus 로고    scopus 로고
    • Controlling type-I error of the McDonald-Kreitman test in genomewide scans for selection on noncoding DNA
    • 10.1534/genetics.108.091850. 18791238
    • Controlling type-I error of the McDonald-Kreitman test in genomewide scans for selection on noncoding DNA. P Andolfatto, Genetics 2008 180 3 1767 71 10.1534/genetics.108.091850 18791238
    • (2008) Genetics , vol.180 , Issue.3 , pp. 1767-71
    • Andolfatto, P.1
  • 23
    • 42249098413 scopus 로고    scopus 로고
    • Ku70 prevents genome instability resulting from heterozygosity of the telomerase RNA component in a vertebrate tumour line
    • 10.1016/j.dnarep.2008.01.008. 18308646
    • Ku70 prevents genome instability resulting from heterozygosity of the telomerase RNA component in a vertebrate tumour line. V Faure T Wenner C Cooley E Bourke CJ Farr S Takeda CG Morrison, DNA Repair (Amst) 2008 7 5 713 24 10.1016/j.dnarep.2008.01.008 18308646
    • (2008) DNA Repair (Amst) , vol.7 , Issue.5 , pp. 713-24
    • Faure, V.1    Wenner, T.2    Cooley, C.3    Bourke, E.4    Farr, C.J.5    Takeda, S.6    Morrison, C.G.7
  • 25
    • 33748473348 scopus 로고    scopus 로고
    • The genomic rate of adaptive evolution
    • 10.1016/j.tree.2006.06.015. 16820244
    • The genomic rate of adaptive evolution. A Eyre-Walker, Trends Ecol Evol 2006 21 10 569 75 10.1016/j.tree.2006.06.015 16820244
    • (2006) Trends Ecol Evol , vol.21 , Issue.10 , pp. 569-75
    • Eyre-Walker, A.1
  • 26
    • 0036961560 scopus 로고    scopus 로고
    • Changing effective population size and the McDonald-Kreitman test
    • 12524367
    • Changing effective population size and the McDonald-Kreitman test. A Eyre-Walker, Genetics 2002 162 4 2017 24 12524367
    • (2002) Genetics , vol.162 , Issue.4 , pp. 2017-24
    • Eyre-Walker, A.1
  • 27
    • 12744271852 scopus 로고    scopus 로고
    • Comparison of the chicken and turkey genomes reveals a higher rate of nucleotide divergence on microchromosomes than macrochromosomes
    • 10.1101/gr.3021305. 15590944
    • Comparison of the chicken and turkey genomes reveals a higher rate of nucleotide divergence on microchromosomes than macrochromosomes. E Axelsson MT Webster NG Smith DW Burt H Ellegren, Genome Res 2005 15 1 120 5 10.1101/gr.3021305 15590944
    • (2005) Genome Res , vol.15 , Issue.1 , pp. 120-5
    • Axelsson, E.1    Webster, M.T.2    Smith, N.G.3    Burt, D.W.4    Ellegren, H.5
  • 28
    • 62749186214 scopus 로고    scopus 로고
    • Avian comparative genomics: Reciprocal chromosome painting between domestic chicken (Gallus gallus) and the stone curlew (Burhinus oedicnemus, Charadriiformes) - An atypical species with low diploid number
    • 10.1007/s10577-009-9021-6. 19172404
    • Avian comparative genomics: reciprocal chromosome painting between domestic chicken (Gallus gallus) and the stone curlew (Burhinus oedicnemus, Charadriiformes) - an atypical species with low diploid number. W Nie PC O'Brien BL Ng B Fu V Volobouev NP Carter MA Ferguson-Smith F Yang, Chromosome Res 2009 17 99 113 10.1007/s10577-009-9021-6 19172404
    • (2009) Chromosome Res , vol.17 , pp. 99-113
    • Nie, W.1    O'Brien, P.C.2    Ng, B.L.3    Fu, B.4    Volobouev, V.5    Carter, N.P.6    Ferguson-Smith, M.A.7    Yang, F.8
  • 29
    • 34248231212 scopus 로고    scopus 로고
    • The evolution of the avian genome as revealed by comparative molecular cytogenetics
    • 10.1159/000103166. 17675846
    • The evolution of the avian genome as revealed by comparative molecular cytogenetics. DK Griffin LB Robertson HG Tempest BM Skinner, Cytogenet Genome Res 2007 117 64 77 10.1159/000103166 17675846
    • (2007) Cytogenet Genome Res , vol.117 , pp. 64-77
    • Griffin, D.K.1    Robertson, L.B.2    Tempest, H.G.3    Skinner, B.M.4
  • 30
    • 51849143838 scopus 로고    scopus 로고
    • A linkage map of the zebra finch Taeniopygia guttata provides new insights into avian genome evolution
    • 10.1534/genetics.107.086264. 18493078
    • A linkage map of the zebra finch Taeniopygia guttata provides new insights into avian genome evolution. J Stapley TR Birkhead T Burke J Slate, Genetics 2008 179 1 651 67 10.1534/genetics.107.086264 18493078
    • (2008) Genetics , vol.179 , Issue.1 , pp. 651-67
    • Stapley, J.1    Birkhead, T.R.2    Burke, T.3    Slate, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.