-
3
-
-
33749068037
-
Predicting gene function by combining expression and interaction data
-
Washington, DC: IEEE Computer Society
-
van Berlo RJP, Wessels LFA, Martes SDC, Reinders MJT. Predicting gene function by combining expression and interaction data. CSBW '05: Proceedings of the 2005 IEEE Computational Systems Bioinformatics Conference - Workshops 2005, 166-167. Washington, DC: IEEE Computer Society.
-
(2005)
CSBW '05: Proceedings of the 2005 IEEE Computational Systems Bioinformatics Conference - Workshops
, pp. 166-167
-
-
van Berlo, R.J.P.1
Wessels, L.F.A.2
Martes, S.D.C.3
Reinders, M.J.T.4
-
4
-
-
0842309161
-
Discovering molecular pathways from protein interaction and gene expression data
-
10.1093/bioinformatics/btg1037, 12855469
-
Segal E, Wang H, Koller D. Discovering molecular pathways from protein interaction and gene expression data. Bioinformatics 2003, 19(Suppl 1):i264-i272. 10.1093/bioinformatics/btg1037, 12855469.
-
(2003)
Bioinformatics
, vol.19
, Issue.SUPPL 1
-
-
Segal, E.1
Wang, H.2
Koller, D.3
-
5
-
-
34548742517
-
Identification of functional modules using network topology and high-throughput data
-
10.1186/1752-0509-1-8, 1839897, 17408515
-
Ulitsky I, Shamir R. Identification of functional modules using network topology and high-throughput data. BMC Systems Biology 2007, 1:8. 10.1186/1752-0509-1-8, 1839897, 17408515.
-
(2007)
BMC Systems Biology
, vol.1
, pp. 8
-
-
Ulitsky, I.1
Shamir, R.2
-
8
-
-
34547840226
-
Annotating Gene Function by Combining Expression Data with a Modular Gene Network
-
10.1093/bioinformatics/btm173, 17646332
-
Shiga M, Takigawa I, Mamitsuka H. Annotating Gene Function by Combining Expression Data with a Modular Gene Network. Bioinformatics 2007, 23:i468-i478. 10.1093/bioinformatics/btm173, 17646332.
-
(2007)
Bioinformatics
, vol.23
-
-
Shiga, M.1
Takigawa, I.2
Mamitsuka, H.3
-
9
-
-
0037161731
-
Comparative assessment of large-scale data sets of protein-protein interactions
-
10.1038/nature750, 12000970
-
von Mering C, Krause R, Snel B, Cornell M, Oliver SG, Fields S, Bork P. Comparative assessment of large-scale data sets of protein-protein interactions. Nature 2002, 417:399-403. 10.1038/nature750, 12000970.
-
(2002)
Nature
, vol.417
, pp. 399-403
-
-
von Mering, C.1
Krause, R.2
Snel, B.3
Cornell, M.4
Oliver, S.G.5
Fields, S.6
Bork, P.7
-
11
-
-
25444472879
-
Confirmation of human protein interaction data by human expression data
-
10.1186/1471-2105-6-112, 1127109, 15877815
-
Hahn A, Rahnenfuhrer J, Talwar P, Lengauer T. Confirmation of human protein interaction data by human expression data. BMC Bioinformatics 2005, 6:112. 10.1186/1471-2105-6-112, 1127109, 15877815.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 112
-
-
Hahn, A.1
Rahnenfuhrer, J.2
Talwar, P.3
Lengauer, T.4
-
12
-
-
0035733690
-
Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae
-
10.1038/ng776, 11694880
-
Ge H, Liu Z, Church GM, Vidal M. Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae. Nature Genetics 2001, 29:482-486. 10.1038/ng776, 11694880.
-
(2001)
Nature Genetics
, vol.29
, pp. 482-486
-
-
Ge, H.1
Liu, Z.2
Church, G.M.3
Vidal, M.4
-
15
-
-
0034069495
-
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
-
10.1038/75556, 10802651
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nature Genetics 2000, 25:25-29. 10.1038/75556, 10802651.
-
(2000)
Nature Genetics
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
-
16
-
-
55449131589
-
Probabilistic Protein Function Prediction from Heterogenous Genome-Wide Data
-
10.1371/journal.pone.0000337, 1828618, 17396164
-
Nariai N, Kolaczyk ED, Kasif S. Probabilistic Protein Function Prediction from Heterogenous Genome-Wide Data. PLoS ONE 2007, 2(3):e337. 10.1371/journal.pone.0000337, 1828618, 17396164.
-
(2007)
PLoS ONE
, vol.2
, Issue.3
-
-
Nariai, N.1
Kolaczyk, E.D.2
Kasif, S.3
-
17
-
-
57749210454
-
An in silico method for detecting overlapping functional modules from composite biological networks
-
10.1186/1752-0509-2-93, 2600641, 18976494
-
Maraziotis I, Dimitrakopoulou K, Bezerianos A. An in silico method for detecting overlapping functional modules from composite biological networks. BMC Systems Biology 2008, 2:93. 10.1186/1752-0509-2-93, 2600641, 18976494.
-
(2008)
BMC Systems Biology
, vol.2
, pp. 93
-
-
Maraziotis, I.1
Dimitrakopoulou, K.2
Bezerianos, A.3
-
18
-
-
77950032550
-
Markov Chain Sampling Methods for Dirichlet Process Mixture Models
-
Neal RM. Markov Chain Sampling Methods for Dirichlet Process Mixture Models. Journal of Computational and Graphical Statistics 2000, 9(2):249-265.
-
(2000)
Journal of Computational and Graphical Statistics
, vol.9
, Issue.2
, pp. 249-265
-
-
Neal, R.M.1
-
19
-
-
0742288061
-
Unique and redundant roles for Hog MAPK pathway components as revealed by whole-genome expression analysis
-
10.1091/mbc.E03-07-0521, 329229, 14595107
-
O'Rourke S, Herskowitz I. Unique and redundant roles for Hog MAPK pathway components as revealed by whole-genome expression analysis. Molecular Biology of the Cell 2004, 15:532-42. 10.1091/mbc.E03-07-0521, 329229, 14595107.
-
(2004)
Molecular Biology of the Cell
, vol.15
, pp. 532-542
-
-
O'Rourke, S.1
Herskowitz, I.2
-
20
-
-
0035162698
-
Genomic expression responses to DNA-damaging agents and the regulatory role of the yeast ATR homolog Mec1p
-
60150, 11598186
-
Gasch A, Huang M, Metzner S, Botstein D, Elledge S. Genomic expression responses to DNA-damaging agents and the regulatory role of the yeast ATR homolog Mec1p. Molecular Biology of the Cell 2001, 12:2987-3003. 60150, 11598186.
-
(2001)
Molecular Biology of the Cell
, vol.12
, pp. 2987-3003
-
-
Gasch, A.1
Huang, M.2
Metzner, S.3
Botstein, D.4
Elledge, S.5
-
21
-
-
0034960264
-
Missing value estimation methods for DNA microarrays
-
10.1093/bioinformatics/17.6.520, 11395428
-
Troyanskaya O, Cantor M, Sherlock G, Brown P, Hastie T, Tibshirani R, Botstein D, Altman RB. Missing value estimation methods for DNA microarrays. Bioinformatics 2001, 17:520-525. 10.1093/bioinformatics/17.6.520, 11395428.
-
(2001)
Bioinformatics
, vol.17
, pp. 520-525
-
-
Troyanskaya, O.1
Cantor, M.2
Sherlock, G.3
Brown, P.4
Hastie, T.5
Tibshirani, R.6
Botstein, D.7
Altman, R.B.8
-
22
-
-
13444306676
-
CYGD: the Comprehensive Yeast Genome Database
-
540007, 15608217, Database
-
Güldener U, Münsterkötter M, Kastenmüller G, Strack N, van Helden J, Lemer C, Richelles J, Wodak SJ, Garcia-Martinez J, Perez-Ortin JE, Michael H, Kaps A, Talla E, Dujon B, Andre B, Souciet JL, Montigny JD, Bon E, Gaillardin C, Mewes HW. CYGD: the Comprehensive Yeast Genome Database. Nucleic Acids Research 2005, (33 Database):D364-8. 540007, 15608217.
-
(2005)
Nucleic Acids Research
, Issue.33
-
-
Güldener, U.1
Münsterkötter, M.2
Kastenmüller, G.3
Strack, N.4
van Helden, J.5
Lemer, C.6
Richelles, J.7
Wodak, S.J.8
Garcia-Martinez, J.9
Perez-Ortin, J.E.10
Michael, H.11
Kaps, A.12
Talla, E.13
Dujon, B.14
Andre, B.15
Souciet, J.L.16
Montigny, J.D.17
Bon, E.18
Gaillardin, C.19
Mewes, H.W.20
more..
-
23
-
-
33947156744
-
Comparing clusterings--an information based distance
-
Meilǎ M. Comparing clusterings--an information based distance. Journal of Multivariate Analysis 2007, 98(5):873-895.
-
(2007)
Journal of Multivariate Analysis
, vol.98
, Issue.5
, pp. 873-895
-
-
Meilǎ, M.1
-
24
-
-
33847264343
-
Enrichment or depletion of a GO category within a class of genes: which test?
-
10.1093/bioinformatics/btl633, 17182697
-
Rivals I, Personnaz L, Taing L, Potier MCC. Enrichment or depletion of a GO category within a class of genes: which test?. Bioinformatics 2007, 23(4):401-407. 10.1093/bioinformatics/btl633, 17182697.
-
(2007)
Bioinformatics
, vol.23
, Issue.4
, pp. 401-407
-
-
Rivals, I.1
Personnaz, L.2
Taing, L.3
Potier, M.C.C.4
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