Integrating data clustering and visualization for the analysis of 3D gene expression data

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Volumn 7, Issue 1, 2010, Pages 64-79

  Rübel, Oliver ^a,b,c   Weber, Gunther H ^a,c   Huang, Min Yu ^a   Bethel, E Wes ^a   Biggin, Mark D ^a   Fowlkes, Charless C ^d   Luengo Hendriks, Cris L ^e   Keränen, Soile V E ^d   Eisen, Michael B ^f   Knowles, David W ^a   Malik, Jitendra ^g   Hagen, Hans ^b   Hamann, Bernd ^c  

^a LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

^b Rheinland Pfälzische Technische Universität Kaiserslautern Landau   (Germany)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d Ringgold Standard Institution Informatics   (United States)

^e SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^f UNIVERSITY OF CALIFORNIA   (United States)

^g UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Bioinformatics visualization; Cluster visualization; Data clustering; Gene expression pattern; Integrating Infovis Scivis; Multimodal visualization; Spatial expression pattern.; Three dimensional gene expression; Visual data mining

Indexed keywords

CLUSTER VISUALIZATION; DATA CLUSTERING; GENE EXPRESSION PATTERNS; MULTI-MODAL VISUALIZATION; SPATIAL EXPRESSION PATTERN.; SPATIAL EXPRESSIONS; VISUAL DATA MINING;

BIOACTIVITY; BIOINFORMATICS; CLUSTERING ALGORITHMS; DATA MINING; DATA VISUALIZATION; IMAGE PROCESSING; INTEGRATION; QUALITY CONTROL; THREE DIMENSIONAL; TRANSCRIPTION; TRANSCRIPTION FACTORS; VISUALIZATION;

CLUSTER ANALYSIS;

ANIMALIA;

ARTICLE; BIOLOGICAL MODEL; CHROMOSOME MAP; COMPUTER GRAPHICS; COMPUTER INTERFACE; COMPUTER SIMULATION; DATA BASE; GENE EXPRESSION PROFILING; GENETIC DATABASE; GENETICS; METHODOLOGY; MULTIGENE FAMILY; SYSTEM ANALYSIS;

CHROMOSOME MAPPING; COMPUTER GRAPHICS; COMPUTER SIMULATION; DATABASE MANAGEMENT SYSTEMS; DATABASES, GENETIC; GENE EXPRESSION PROFILING; MODELS, GENETIC; MULTIGENE FAMILY; SYSTEMS INTEGRATION; USER-COMPUTER INTERFACE;

EID: 76849090815     PISSN: 15455963     EISSN: None     Source Type: Journal    
DOI: 10.1109/TCBB.2008.49     Document Type: Article

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