-
1
-
-
0015859467
-
Principles that govern the folding of protein chains
-
Anfnsen, C.B. Principles that govern the folding of protein chains. Science 181, 223-230 (1973).
-
(1973)
Science
, vol.181
, pp. 223-230
-
-
Anfnsen, C.B.1
-
2
-
-
0030910349
-
GroEL-mediated protein folding
-
Fenton, W.A. & Horwich, A.L. GroEL-mediated protein folding. Protein Sci. 6, 743-760 (1997).
-
(1997)
Protein Sci.
, vol.6
, pp. 743-760
-
-
Fenton, W.A.1
Horwich, A.L.2
-
3
-
-
0029992278
-
Molecular chaperones in cellular protein folding
-
Hartl, F.U. Molecular chaperones in cellular protein folding. Nature 381, 571-579 (1996).
-
(1996)
Nature
, vol.381
, pp. 571-579
-
-
Hartl, F.U.1
-
4
-
-
57049117303
-
The intramolecular chaperone-mediated protein folding
-
Chen, Y.J. & Inouye, M. The intramolecular chaperone-mediated protein folding. Curr. Opin. Struct. Biol. 18, 765-770 (2008).
-
(2008)
Curr. Opin. Struct. Biol.
, vol.18
, pp. 765-770
-
-
Chen, Y.J.1
Inouye, M.2
-
5
-
-
0037969598
-
Proteolytic processing and oligomerization of bacteriophage-derived endosialidases
-
Mühlenhoff, M., Stummeyer, K., Grove, M., Sauerborn, M. & Gerardy-Schahn, R. Proteolytic processing and oligomerization of bacteriophage-derived endosialidases. J. Biol. Chem. 278, 12634-12644 (2003).
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 12634-12644
-
-
Mühlenhoff, M.1
Stummeyer, K.2
Grove, M.3
Sauerborn, M.4
Gerardy-Schahn, R.5
-
6
-
-
34047268904
-
Characterization of a novel intramolecular chaperone domain conserved in endosialidases and other bacteriophage tail spike and fber proteins
-
Schwarzer, D., Stummeyer, K., Gerardy-Schahn, R. & Muhlenhoff, M. Characterization of a novel intramolecular chaperone domain conserved in endosialidases and other bacteriophage tail spike and fber proteins. J. Biol. Chem. 282, 2821-2831 (2007).
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 2821-2831
-
-
Schwarzer, D.1
Stummeyer, K.2
Gerardy-Schahn, R.3
Muhlenhoff, M.4
-
7
-
-
11444265541
-
Crystal structure of the polysialic acid-degrading endosialidase of bacteriophage K1F
-
Stummeyer, K., Dickmanns, A., Muhlenhoff, M., Gerardy-Schahn, R. & Ficner, R. Crystal structure of the polysialic acid-degrading endosialidase of bacteriophage K1F. Nat. Struct. Mol. Biol. 12, 90-96 (2005).
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 90-96
-
-
Stummeyer, K.1
Dickmanns, A.2
Muhlenhoff, M.3
Gerardy-Schahn, R.4
Ficner, R.5
-
8
-
-
0038154169
-
β-stranded viral adhesins and tail proteins
-
Weigele, P.R., Scanlon, E. & King, J. Homotrimeric, β-stranded viral adhesins and tail proteins. J. Bacteriol. 185, 4022-4030 (2003).
-
(2003)
J. Bacteriol.
, vol.185
, pp. 4022-4030
-
-
Weigele, P.R.1
Scanlon, E.2
Homotrimeric, K.J.3
-
9
-
-
33845661120
-
β-rolls, β-helices, and other β-solenoid proteins
-
Kajava, A.V. & Steven, A.C. β-rolls, β-helices, and other β-solenoid proteins. Adv. Protein Chem. 73, 55-96 (2006).
-
(2006)
Adv. Protein Chem.
, vol.73
, pp. 55-96
-
-
Kajava, A.V.1
Steven, A.C.2
-
10
-
-
13244260999
-
Amyloid fbril formation from sequences of a natural β-structured fbrous protein, the adenovirus fber
-
Papanikolopoulou, K., et al. Amyloid fbril formation from sequences of a natural β-structured fbrous protein, the adenovirus fber. J. Biol. Chem. 280, 2481-2490 (2005).
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 2481-2490
-
-
Papanikolopoulou, K.1
-
11
-
-
33845648118
-
Natural triple β-stranded fbrous folds
-
Mitraki, A., Papanikolopoulou, K. & Van Raaij, M.J. Natural triple β-stranded fbrous folds. Adv. Protein Chem. 73, 97-124 (2006).
-
(2006)
Adv. Protein Chem.
, vol.73
, pp. 97-124
-
-
Mitraki, A.1
Papanikolopoulou, K.2
Van Raaij, M.J.3
-
12
-
-
0034495297
-
Structural comparison of Ntn-hydrolases
-
Oinonen, C. & Rouvinen, J. Structural comparison of Ntn-hydrolases. Protein Sci. 9, 2329-2337 (2000).
-
(2000)
Protein Sci.
, vol.9
, pp. 2329-2337
-
-
Oinonen, C.1
Rouvinen, J.2
-
13
-
-
0026315122
-
The role of electrostatic interactions in the mechanism of peptide bond hydrolysis by a Ser-Lys catalytic dyad
-
Slilaty, S.N. & Vu, H.K. The role of electrostatic interactions in the mechanism of peptide bond hydrolysis by a Ser-Lys catalytic dyad. Protein Eng. 4, 919-922 (1991).
-
(1991)
Protein Eng.
, vol.4
, pp. 919-922
-
-
Slilaty, S.N.1
Vu, H.K.2
-
14
-
-
0026345864
-
Structural and thermodynamic consequences of burying a charged residue within the hydrophobic core of T4 lysozyme
-
Dao-pin, S., Anderson, D.E., Baase, W.A., Dahlquist, F.W. & Matthews, B.W. Structural and thermodynamic consequences of burying a charged residue within the hydrophobic core of T4 lysozyme. Biochemistry 30, 11521-11529 (1991).
-
(1991)
Biochemistry
, vol.30
, pp. 11521-11529
-
-
Dao-Pin, S.1
Anderson, D.E.2
Baase, W.A.3
Dahlquist, F.W.4
Matthews, B.W.5
-
15
-
-
0024832465
-
Autodigestion and RecA-dependent cleavage of Ind-mutant LexA proteins
-
Lin, L.L. & Little, J.W. Autodigestion and RecA-dependent cleavage of Ind-mutant LexA proteins. J. Mol. Biol. 210, 439-452 (1989).
-
(1989)
J. Mol. Biol.
, vol.210
, pp. 439-452
-
-
Lin, L.L.1
Little, J.W.2
-
16
-
-
1542275365
-
Formation of highly stable chimeric trimers by fusion of an adenovirus fber shaft fragment with the foldon domain of bacteriophage t4 fbritin
-
Papanikolopoulou, K., Forge, V., Goeltz, P. & Mitraki, A. Formation of highly stable chimeric trimers by fusion of an adenovirus fber shaft fragment with the foldon domain of bacteriophage t4 fbritin. J. Biol. Chem. 279, 8991-8998 (2004).
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 8991-8998
-
-
Papanikolopoulou, K.1
Forge, V.2
Goeltz, P.3
Mitraki, A.4
-
17
-
-
4143062581
-
Adenovirus fbre shaft sequences fold into the native triple β-spiral fold when N-terminally fused to the bacteriophage T4 fbritin foldon trimerisation motif
-
Papanikolopoulou, K., et al. Adenovirus fbre shaft sequences fold into the native triple β-spiral fold when N-terminally fused to the bacteriophage T4 fbritin foldon trimerisation motif. J. Mol. Biol. 342, 219-227 (2004).
-
(2004)
J. Mol. Biol.
, vol.342
, pp. 219-227
-
-
Papanikolopoulou, K.1
-
18
-
-
0033613385
-
A triple β-spiral in the adenovirus fbre shaft reveals a new structural motif for a fbrous protein
-
van Raaij, M.J., Mitraki, A., Lavigne, G. & Cusack, S. A triple β-spiral in the adenovirus fbre shaft reveals a new structural motif for a fbrous protein. Nature 401, 935-938 (1999).
-
(1999)
Nature
, vol.401
, pp. 935-938
-
-
Van Raaij, M.J.1
Mitraki, A.2
Lavigne, G.3
Cusack, S.4
-
19
-
-
47249162887
-
Crystal structure of Escherichia coli phage HK620 tailspike: Podoviral tailspike endoglycosidase modules are evolutionarily related
-
Barbirz, S., et al. Crystal structure of Escherichia coli phage HK620 tailspike: podoviral tailspike endoglycosidase modules are evolutionarily related. Mol. Microbiol. 69, 303-316 (2008).
-
(2008)
Mol. Microbiol.
, vol.69
, pp. 303-316
-
-
Barbirz, S.1
-
20
-
-
42949161202
-
An intersubunit active site between supercoiled parallel β helices in the trimeric tailspike endorhamnosidase of Shigella fexneri Phage Sf6
-
Müller, J.J., et al. An intersubunit active site between supercoiled parallel β helices in the trimeric tailspike endorhamnosidase of Shigella fexneri Phage Sf6. Structure 16, 766-775 (2008).
-
(2008)
Structure
, vol.16
, pp. 766-775
-
-
Müller, J.J.1
-
21
-
-
0031564610
-
Phage P22 tailspike protein: Crystal structure of the head-binding domain at 2.3 A, fully refned structure of the endorhamnosidase at 1.56 A resolution, and the molecular basis of O-antigen recognition and cleavage
-
Steinbacher, S., et al. Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 A, fully refned structure of the endorhamnosidase at 1.56 A resolution, and the molecular basis of O-antigen recognition and cleavage. J. Mol. Biol. 267, 865-880 (1997).
-
(1997)
J. Mol. Biol.
, vol.267
, pp. 865-880
-
-
Steinbacher, S.1
-
22
-
-
0028095571
-
Crystal structure of P22 tailspike protein: Interdigitated subunits in a thermostable trimer
-
Steinbacher, S., et al. Crystal structure of P22 tailspike protein: interdigitated subunits in a thermostable trimer. Science 265, 383-386 (1994).
-
(1994)
Science
, vol.265
, pp. 383-386
-
-
Steinbacher, S.1
-
23
-
-
65549169054
-
Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike
-
Xiang, Y., et al. Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike. Mol. Cell 34, 375-386 (2009).
-
(2009)
Mol. Cell
, vol.34
, pp. 375-386
-
-
Xiang, Y.1
-
24
-
-
56649103902
-
Searching protein structure databases with DaliLite v.3
-
Holm, L., Kaariainen, S., Rosenstrom, P. & Schenkel, A. Searching protein structure databases with DaliLite v.3. Bioinformatics 24, 2780-2781 (2008).
-
(2008)
Bioinformatics
, vol.24
, pp. 2780-2781
-
-
Holm, L.1
Kaariainen, S.2
Rosenstrom, P.3
Schenkel, A.4
-
25
-
-
0033680802
-
Structure of the molecular chaperone prefoldin: Unique interaction of multiple coiled coil tentacles with unfolded proteins
-
Siegert, R., Leroux, M.R., Scheufer, C., Hartl, F.U. & Moaref, I. Structure of the molecular chaperone prefoldin: unique interaction of multiple coiled coil tentacles with unfolded proteins. Cell 103, 621-632 (2000).
-
(2000)
Cell
, vol.103
, pp. 621-632
-
-
Siegert, R.1
Leroux, M.R.2
Scheufer, C.3
Hartl, F.U.4
Moaref, I.5
-
26
-
-
4744373535
-
Structure of the periplasmic chaperone Skp suggests functional similarity with cytosolic chaperones despite differing architecture
-
Korndörfer, I.P., Dommel, M.K. & Skerra, A. Structure of the periplasmic chaperone Skp suggests functional similarity with cytosolic chaperones despite differing architecture. Nat. Struct. Mol. Biol. 11, 1015-1020 (2004).
-
(2004)
Nat. Struct. Mol. Biol.
, vol.11
, pp. 1015-1020
-
-
Korndörfer, I.P.1
Dommel, M.K.2
Skerra, A.3
-
27
-
-
33749538453
-
Convergent evolution of clamp-like binding sites in diverse chaperones
-
Stirling, P.C., Bakhoum, S.F., Feigl, A.B. & Leroux, M.R. Convergent evolution of clamp-like binding sites in diverse chaperones. Nat. Struct. Mol. Biol. 13, 865-870 (2006).
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 865-870
-
-
Stirling, P.C.1
Bakhoum, S.F.2
Feigl, A.B.3
Leroux, M.R.4
-
28
-
-
0035964342
-
Electrostatics of nanosystems: Application to microtubules and the ribosome
-
Baker, N.A., Sept, D., Joseph, S., Holst, M.J. & McCammon, J.A. Electrostatics of nanosystems: application to microtubules and the ribosome. Proc. Natl. Acad. Sci. USA 98, 10037-10041 (2001).
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 10037-10041
-
-
Baker, N.A.1
Sept, D.2
Joseph, S.3
Holst, M.J.4
McCammon, J.A.5
-
29
-
-
0027879008
-
Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants
-
Kabsch, W. Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants. J. Appl. Cryst. 26, 795-800 (1993).
-
(1993)
J. Appl. Cryst.
, vol.26
, pp. 795-800
-
-
Kabsch, W.1
-
30
-
-
36549027357
-
Automated structure solution with autoSHARP
-
Vonrhein, C., Blanc, E., Roversi, P. & Bricogne, G. Automated structure solution with autoSHARP. Methods Mol. Biol. 364, 215-230 (2007).
-
(2007)
Methods Mol. Biol.
, vol.364
, pp. 215-230
-
-
Vonrhein, C.1
Blanc, E.2
Roversi, P.3
Bricogne, G.4
-
31
-
-
2142689200
-
SOLVE and RESOLVE: Automated structure solution, density modifcation and model building
-
Terwilliger, T. SOLVE and RESOLVE: automated structure solution, density modifcation and model building. J. Synchrotron Radiat. 11, 49-52 (2004).
-
(2004)
J. Synchrotron Radiat.
, vol.11
, pp. 49-52
-
-
Terwilliger, T.1
-
33
-
-
11844301261
-
Recent developments in the PHENIX software for automated crystallographic structure determination
-
Adams, P.D., et al. Recent developments in the PHENIX software for automated crystallographic structure determination. J. Synchrotron Radiat. 11, 53-55 (2004).
-
(2004)
J. Synchrotron Radiat.
, vol.11
, pp. 53-55
-
-
Adams, P.D.1
-
34
-
-
37349103121
-
Iterative model building, structure refnement and density modifcation with the PHENIX AutoBuild wizard
-
Terwilliger, T.C., et al. Iterative model building, structure refnement and density modifcation with the PHENIX AutoBuild wizard. Acta Crystallogr. D Biol. Crystallogr. 64, 61-69 (2008).
-
(2008)
Acta Crystallogr. D Biol. Crystallogr.
, vol.64
, pp. 61-69
-
-
Terwilliger, T.C.1
-
35
-
-
49649085631
-
Automated structure solution with the PHENIX suite
-
Zwart, P.H., et al. Automated structure solution with the PHENIX suite. Methods Mol. Biol. 426, 419-435 (2008).
-
(2008)
Methods Mol. Biol.
, vol.426
, pp. 419-435
-
-
Zwart, P.H.1
-
36
-
-
37349121133
-
Model preparation in MOLREP and examples of model improvement using X-ray data
-
Lebedev, A.A., Vagin, A.A. & Murshudov, G.N. Model preparation in MOLREP and examples of model improvement using X-ray data. Acta Crystallogr. D Biol. Crystallogr. 64, 33-39 (2008).
-
(2008)
Acta Crystallogr. D Biol. Crystallogr.
, vol.64
, pp. 33-39
-
-
Lebedev, A.A.1
Vagin, A.A.2
Murshudov, G.N.3
-
37
-
-
33846426122
-
Solving structures of protein complexes by molecular replacement with Phaser
-
McCoy, A.J. Solving structures of protein complexes by molecular replacement with Phaser. Acta Crystallogr. D Biol. Crystallogr. 63, 32-41 (2007).
-
(2007)
Acta Crystallogr. D Biol. Crystallogr.
, vol.63
, pp. 32-41
-
-
McCoy, A.J.1
-
38
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S.F., et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402 (1997).
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
-
39
-
-
0032961270
-
ESPript: Analysis of multiple sequence alignments in PostScript
-
Gouet, P., Courcelle, E., Stuart, D.I. & Metoz, F. ESPript: analysis of multiple sequence alignments in PostScript. Bioinformatics 15, 305-308 (1999).
-
(1999)
Bioinformatics
, vol.15
, pp. 305-308
-
-
Gouet, P.1
Courcelle, E.2
Stuart, D.I.3
Metoz, F.4
-
40
-
-
0043123208
-
ESPript/ENDscript: Extracting and rendering sequence and 3D information from atomic structures of proteins
-
Gouet, P., Robert, X. & Courcelle, E. ESPript/ENDscript: extracting and rendering sequence and 3D information from atomic structures of proteins. Nucleic Acids Res. 31, 3320-3323 (2003).
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3320-3323
-
-
Gouet, P.1
Robert, X.2
Courcelle, E.3
|