Data specific spatially varying regularization for multimodal fluorescence molecular tomography

IEEE Transactions on Medical Imaging

Volumn 29, Issue 2, 2010, Pages 365-374

  Hyde, Damon ^a   Miller, Eric L ^b   Brooks, Dana H ^c   Ntziachristos, Vasilis ^d  

^a BOSTON CHILDREN S HOSPITAL   (United States)

^b Tufts University   (United States)

^c Northeastern University   (United States)

^d TECHNICAL UNIVERSITY OF MUNICH   (Germany)

Author keywords

Fluorescence; Multimodality; Tomography

Indexed keywords

ANATOMIC INFORMATION; APRIORI; BIODISTRIBUTIONS; DATA SETS; EXPERIMENTAL DATA; FLUORESCENCE MOLECULAR TOMOGRAPHY; FULL RESOLUTIONS; GEOMETRIC INFORMATION; HIGH-RESOLUTION IMAGING; ILL POSED; IMAGING PERFORMANCE; IN-VIVO; LOW DIMENSIONAL; MATRIX; MULTI-MODAL; MULTI-MODALITY; REGULARIZATION TECHNIQUE; TOMOGRAPHIC RECONSTRUCTION; TWO-STEP APPROACH; X-RAY COMPUTED TOMOGRAPHY;

ANIMALS; COMPUTERIZED TOMOGRAPHY; HEARING AIDS; IMAGE QUALITY; INVERSE PROBLEMS; MAGNETIC RESONANCE IMAGING; PULSE MODULATION; RESONANCE; TRANSFER MATRIX METHOD;

FLUORESCENCE;

AMYLOID;

ALGORITHM; ALZHEIMER DISEASE; ANIMAL; ARTICLE; BRAIN; COMPUTER ASSISTED TOMOGRAPHY; COMPUTER SIMULATION; FLUORESCENCE; IMAGE PROCESSING; METHODOLOGY; MOUSE; RADIOGRAPHY; REPRODUCIBILITY; THEORETICAL MODEL; TOMOGRAPHY; TRANSGENIC MOUSE;

ALGORITHMS; ALZHEIMER DISEASE; AMYLOID; ANIMALS; BRAIN; COMPUTER SIMULATION; FLUORESCENCE; IMAGE PROCESSING, COMPUTER-ASSISTED; MICE; MICE, TRANSGENIC; MODELS, THEORETICAL; REPRODUCIBILITY OF RESULTS; TOMOGRAPHY; TOMOGRAPHY, X-RAY COMPUTED;

EID: 76249129387     PISSN: 02780062     EISSN: None     Source Type: Journal    
DOI: 10.1109/TMI.2009.2031112     Document Type: Article

References (32)

1. E. E. Graves, J. Ripoll, R. Weissleder, and V. Ntziachristos, "A sub-millimeter resolution fluorescence molecular imaging system for small animal imaging, " Med. Phys., vol.30, no.5, pp. 901-911, May 2003.
2. V. Ntziachristos, E. A. Schellenberger, J. Ripoll, D. Yessayan, E. Graves, J. A. Bogdanov, L. Josephson, and R. Weissleder, "Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin v-cy5. 5 conjugate, " Proc. Nat. Acad. Sci., vol.101, no.33, pp. 12294-12312 299, Aug. 2004.
3. A. Joshi, W. Bangerth, K. Hwang, J. Rasmussen, andE. M. Sevick-Mu-raca, "Plane-wave fluorescence tomography with adaptive finite elements, " Opt. Lett., vol.31, no.2, pp. 193-195, 2006.
4. J. Lee and E. M. Sevick-Muraca, "Three-dimensional fluorescence enhanced optical tomography using referenced frequency-domain photon migration measurements at emission and excitation wavelengths, " J. Opt. Soc. Am. A, vol.19, no.4, pp. 759-771, Apr. 2002.
5. A. D. Klose and A. H. Hielscher, "Fluorescence tomography with simulated data based on the equation of radiative transfer, " Opt. Lett., vol.28, no.12, pp. 1091-11021, Jun. 2003.
6. M. J. Eppstein, D. J. Hawrysz, A. Godavarty, andE. M. Sevick-Muraca, "Three-dimensional, Bayesian image reconstruction from sparse and noisy data sets: Neart-infrared fluorescence tomography, " Proc. Nat. Acad. Sci., vol.99, no.15, pp. 9619-9624, Jul. 2002.
7. H. Jiang, "Frequency-domain fluorescent diffusion tomograph: A finite-element-based algorithm and simulations, " Appl. Opt., vol.37, no.22, pp. 5337-5343, Aug. 1998.
8. M. A. O'Leary, D. A. Boas, X. D. Li, B. Chance, and A. Yodh, "Fluorescence lifetime imaging in turbid media, " Opt. Lett., vol.21, no.2, pp. 158-160, Jan. 1996.
9. M. Eppstein, F. Fedele, J. Laible, C. Zhang, A. Godavary, and E. Sevick-Muraca, "A comparison of exact and approximate adjoint sensitivities in fluorescence tomography, " IEEE Trans. Med. Imag., vol.22, no.10, pp. 1215-1223, Oct. 2003.
10. A. B. Milstein, S. Oh, K. J. Webb, C. A. Bouman, Q. Zhang, D. A. Boas, and R. Millane, "Fluorescence optical diffusion tomography, " Appl. Opt., vol.42, no.16, pp. 3081-3093, Jun. 2003.
11. J. Chang, H. L. Graber, and R. L. Barbour, "Imaging of fluorescence in highly scattering media, " IEEE Trans. Biomed. Eng., vol.44, no.9, pp. 810-822, Sep. 1997.
12. A. Kumar, S. Raymond, B. Bacskai, and D. Boas, "Comparison of frequency domain and time domain fluorescence lifetime tomography, " Opt. Lett., vol.33, no.5, pp. 470-472, 2008.
13. A. B. Milstein, M. D. Kennedy, P. S. Low, C. A. Bouman, and K. J. Webb, "Detection and localization of a fluorescing mouse tumor in a turbid medium, " Appl. Opt., vol.44, no.12, pp. 2300-2310, Apr. 2005.
14. V. Ntziachristos, J. Ripoll, L. V. Wang, and R. Weissleder, "Looking and listening to light: The evolution of whole-body photonic imaging, " Nature Biotech., vol.23, no.3, pp. 313-320, Mar. 2005.
15. N. Deliolanis, T. Lasser, D. Hyde, A. Soubret, J. Ripoll, and V. Ntziachristos, "Free-space fluorescence molecular tomography utilizing 360 ° geometry projections, " Opt. Lett., vol.32, no.4, p. 382, Jan. 2007.
16. P. Yalavarty, B. Pogue, H. Dehghani, and K. Paulsen, "Weight-matrix structured regularization provides optimal generalized least-squares estimate in diffuse optical tomography, " Med. Phys., vol.34, no.6, pp. 2085-2098, 2007.
17. S. C. Davis, H. Dehghani, J. Wang, S. Jiang, B. W. Pogue, and K. D. Paulsen, "Image-guided diffuse optical fluorescence tomography implemented with laplacian-type regularization, " Opt. Exp., vol.15, no.7, pp. 4066-4082, Apr. 2007. (Pubitemid 46557568)
18. X. Intes, C. Maloux, M. Guven, B. Yazici, and B. Chance, "Diffuse optical tomography with physiological and spatial a priori constraints, " Phys. Med. Biol, vol.49, no.12, pp. N155-N163, 2004.
19. M. Guven, B. Yazici, X. Intes, and B. Chance, "Diffuse optical tomography with a priori anatomical information, " Phys. Med. Biol, vol.50, no.12, pp. 2837-2858, 2005. (Pubitemid 40771015)
20. Y. Lin, H. Yan, O. Nalcioglu, and G. Gulsen, "Quantitative fluorescence tomography with functional and structural a priori information, " Appl. Opt., vol.48, no.7, pp. 1328-1336, 2009.
21. D. Hyde, R. DeKleine, S. A. MacLaurin, E. Miller, D. H. Brooks, T. Krucker, and V. Ntziachristos, "Hybrid fmt-ct imaging of amyloid-j3 plaques in a murine alzheimer's disease model, " NeuroImage, vol.44, no.4, pp. 1304-1311, Feb. 2009.
22. V. Ntziachristos, A. G. Yodh, M. Schnall, and B. Chance, "Concurrent mri and diffuse optical tomography of breast after indocyanine green enhancement, " Proc. Nat. Acad. Sci., vol.97, pp. 2767-2772, 2000.
23. A. Kienle and M. S. Patterson, "Improved solutions of the steady-state and the time-resolved diffusion equations for reflectance from a semi-infinite turbid medium, "J. Opt. Soc. Am. A, vol.14, no.1, pp. 246-254, 1997.
24. V. Ntziachristos and R. Weissleder, "Experimental three-dimensional fluorescence reconstruction of diffuse media by use of the normalized born approximation, " Opt. Lett., vol.26, no.12, pp. 893-895, Jun. 2001.
25. D. Hyde, E. Miller, D. H. Brooks, and V. Ntziachristos, "A statistical method for inverting the born ratio, " IEEE Trans. Med. Imag., vol.26, no.7, pp. 893-905, Jul. 2007.
26. P. C. Hansen, "Analysis of discrete ill-posed problems by means of the l-curve, "SIAMRev., vol.34, no.4, pp. 561-580, 1992.
27. J. Nagy and Z. Strakos, "Enforcing nonnegativity in image reconstruction algorithms, " in Proc. SPIE Mathematical Modeling, Estimation, and Imaging, D. C. Wilson, Ed. Bellingham: WA, 2000, pp. 182-190.
28. P. C. Hansen, Rank Deficient and Discrete Ill-Posed Problems ser. SIAM Monographs on Mathematical Modeling and Computation, 1998.
29. T. Lasser, A. Soubret, J. Ripoll, and V. Ntziachristos, "Surface reconstruction for free-space 360 ° fluorescence molecular tomography and the effects of animal motion, " IEEE Trans. Med. Imag., vol.27, no.2, pp. 188-194, Feb. 2008.
30. M. Hintersteiner, A. Enz, P. Frey, A.-L. Jaton, W. Kinzy, R. Kneuer, U. Neumann, M. Rudin, M. Staufenbiel, M. Stoeckli, K.-H. Wieder-hold, and H.-U. Gremlish, "In vivo detection of amyloid-j3 deposits by near-infrared imaging using an oxazine-derivative probe, " Nature Biotechnol., vol.23, no.5, pp. 577-583, May 2005.
31. G. H. Golub and C. F. V. Loan, Matrix Computations. Baltimore, MD: John Hopkins Univ. Press, 1996.
32. V. Ntziachristos, A. G. Yodh, M. D. Schnall, and B. Chance, "Mri-guided diffuse optical spectroscopy of malignant and benign breast lesions, " Neoplasia, vol.4, pp. 347-354, 2002.