Diffuse optical tomography with a priori anatomical information

Physics in Medicine and Biology

Volumn 50, Issue 12, 2005, Pages 2837-2858

  Guven, Murat ^a   Yazici, Birsen ^a   Intes, Xavier ^b,c   Chance, Britton ^b  

^a RENSSELAER POLYTECHNIC INSTITUTE   (United States)

^b UNIVERSITY OF PENNSYLVANIA   (United States)

^c ART Advanced Research Technologies Inc   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; COMPUTATIONAL COMPLEXITY; MAGNETIC RESONANCE; OPTICAL CORRELATION; X RAY ANALYSIS;

ANATOMICAL IMAGE; ANATOMICAL INFORMATION; SPATIAL RESOLUTION;

TOMOGRAPHY;

ARTICLE; BAYES THEOREM; CORRELATION ANALYSIS; DIAGNOSTIC ACCURACY; MATHEMATICAL COMPUTING; NUCLEAR MAGNETIC RESONANCE IMAGING; OPTICAL TOMOGRAPHY; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; X RAY;

ANATOMY; BAYES THEOREM; ELECTROMAGNETICS; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; PHANTOMS, IMAGING; REPRODUCIBILITY OF RESULTS; TOMOGRAPHY;

EID: 20044368023     PISSN: 00319155     EISSN: None     Source Type: Journal    
DOI: 10.1088/0031-9155/50/12/008     Document Type: Article

References (69)

1. Arridge S R 1993 Forward and inverse problems in time resolved infrared imaging Medical Optical Tomography vol IS11 ed G Muller (Bellingham, WA: SPIE Optical Engineering) pp 53-64
2. Arridge S R 1995 Photon measurement density functions part 1: analytical forms Appl. Opt. 34 7395-409
3. Arridge S R 1999 Optical tomography in medical imaging Inverse Problems 15 R41-93
4. Arridge S R and Hebden J C 1997 Optical imaging in medicine: II. Modeling and reconstruction Phys. Med. Biol. 42 841-53
5. Barbour R L, Graber H L, Chang J, Barbour S-L S, Koo P C and Aronson R 1995 MRI-Guided optical tomography: prospects and computation for a new imaging method IEEE Comput. Sci. Eng. 2 63-76
6. Berger J O 1988 Statistical Decision Theory and Bayesian Analysis (Berlin: Springer)
7. Boas D, Brooks D, Miller E, DiMarzio C, Kilmer M, Gaudette R J and Zhang Q 2001 Imaging the body with diffuse optical tomography IEEE Signal Process. Mag. 18 57-75
8. Brooksby B, Dehghani H, Pogue B and Paulsen K D 2003 Near-Infrared (NIR) tomography breast reconstruction with a priori structural information from MRI: algorithm development reconstructing heterogeneities IEEE J. Sel. Top. Quantum Electron. 9 199-209
9. Cerussi A, Berger A, Bevilacqua F, Shah N, Jakubowski D, Butler J, Holcombe R F and Tromberg B J 2001 Sources of absorption and scattering contrast for near-infrared optical mammography Acad. Radiol. 8 211-8
10. Chance B, Nioka S and Chen Y 2003 Shining new light on brain function OE Mag. 3 16-9
11. Chang J, Graber H L and Barbour R L 1997 Imaging of fluorescence in highly scattering media IEEE Trans. Biomed. Eng. 44 810-22
12. Chang J, Graber H L, Koo P C, Aronson R, Barbour S L and Barbour R L 1997 Optical imaging of anatomical maps derived from magnetic resonance imaging using time-independent optical sources IEEE Trans. Med. Imaging 16 68-77
13. Cheong W F, Prahl S A and Welch A J A 1990 Review of the optical properties of biological tissues IEEE J. Quantum Electron. 26 2166-85
14. Csiszar I and Tusnady G 1984 Information geometry and alternating minimization procedures Stat. Decis. (Suppl) 1 205-37
15. Cuccia D J, Bevilacqua F, Durkin A J, Merritt S, Tromberg B J, Gulsen G, Yu H, Wang J and Nalcioglu O 2003 In vivo quantification of optical contrast agent dynamics in rat tumors by use of diffuse optical spectroscopy with magnetic resonance imaging coregistration Appl. Opt. 42 2940-50
16. Dehghani H Pogue B W and Paulsen K D 2002 Development of hybrid NIR/MRI imaging system algorithm: use of a-priori information for tumor detection in the female breast Proc. IEEE Int. Symp. on Biomedical Imaging pp 657-60
17. Eppstein M J, Hawrysz D J, Godavarty A and Sevick-Muraca E M 2002 Three dimensional near infrared fluorescence tomography with Bayesian methodologies for image reconstruction from sparse and noisy data sets Proc. Natl Acad. Sci. 99 9619-24
18. Frangioni J V 2003 In vivo near-infrared fluorescence imaging Curr. Opin. Chem. Biol. 7 626-34
19. Galatsanos N P, Mesarovic V Z, Molina R, Katsaggelos A K and Mateos J 2002 Hyperparameter estimation in image restoration problems with partially-known blurs Soc. Photo-Opt. Instrum. Eng. 41 1845-54
20. Gulsen G, Birgul O and Nalcioglu O 2003 Hybrid DOT and MR system Proc. SPIE 4955 246-52
21. Guven M, Yazici B, Intes X and Chance B 2003a Diffuse optical tomography with a priori anatomical information Proc. SPIE 4955 634-46
22. Guven M, Yazici B, Intes X and Chance B 2003b Three-dimensional diffuse optical tomography with a priori anatomical information Proc. SPIE 5138 268-80
23. Guven M, Yazici B, Intes X, Chance B and Zheng Y 2002 Recursive least squares algorithm for optical diffusion tomography Proc. IEEE 28th Annual Northeast pp 273-4
24. Hawrysz D J and Sevick-Muraca E M 2000 Developments toward diagnostic breast cancer imaging using near-infrared optical measurements and fluorescent contrast agents Neoplasia 2 388-417
25. Hebden J C, Arridge S R and Delpy D T 1997 Optical imaging in medicine: I. Experimental techniques Phys. Med. Biol. 42 825-40
26. Hebden J C, Gibson A, Austin T, Yusof R, Everdell N, Delpy E, Arridge S R, Meek J H and Wyatt J S 2004 Imaging changes in blood volume and oxygenation in the newborn infant brain using three-dimensional optical tomography Phys. Med. Biol. 49 1117-30
27. Hielscher A H and Bartel S 2001 Use of penalty terms in gradient-based iterative reconstruction schemes for optical tomography J. Biomed. Opt. 6 183-92
28. Intes X and Chance B 2005 Non-PET functional imaging techniques: optical The Radiol. Clin. North Am. 43 221-34
29. Intes X, Maloux C, Guven M, Yazici B and Chance B 2004 Diffuse optical tomography with physiological and spatial a priori constraints Phys. Med. Biol. 49 N155-63
30. Intes X, Ripoll J, Chen Y, Nioka S, Yodh A and Chance B 2003 In vivo continuous-wave optical breast imaging enhanced with Indocyanine Green Med. Phys. Biol. 30 1039-47
31. Intes X, Yu J, Yodh A G and Chance B 2002 Development and evaluation of a multi-wavelength multi-channel time resolved optical instrument for NIR/MRI mammography co-registration Proc. IEEE 28th Annual Northeast Bioengineering Conf. (IEEE Cat. No.02CH37342) pp 91-2
32. Jiang H, Paulsen K D, Osterberg U L, Pogue B W and Patterson M S 1996 Optical image reconstruction using frequency-domain data: simulation and experiment J. Opt. Soc. Am. A 13 253-66
33. Kak A C and Slaney M 1988 Principles of Computerized Tomographic Imaging (New York: IEEE) pp 208-18
34. Kincade K 2004 Optical diagnostics continue migration from bench top to beside Laser Focus World 40 130-4
35. Li A et al 2003 A tomographic optical breast imaging guided by 3D mammography Appl. Opt. 42 5181-90
36. Merritt S, Bevilacqua F, Durkin A J, Cuccia D J, Lanning R, Tromberg B J, Gulsen G, Yu G, Wang J and Nalcioglu O 2003a Coregistration of diffuse optical spectroscopy and magnetic resonance imaging in a rat tumor model Appl. Opt. 42 2951-58
37. Merritt S, Gulsen G, Chiou G, Chu Y, Deng C, Cerussi A, Durkin A, Tromberg B and Nalcioglu O 2003b Comparison of water and lipid content measurements using diffuse optical spectroscopy and MRI in emulsion phantoms Technol. Cancer Res. Treat. 2 563-9
38. Milstein A B, Oh S, Reynolds J S, Webb K J and Bouman C A 2002 Three-dimensional Bayesian optical diffusion tomography with experimental data Opt. Lett. 27 95-7
39. Mobley J and Vo-Dinh T 2003 Biomedical Photonics, Handbook (Boca Raton, FL: CRC Press) chapter 2
40. Mohammad-Djafari A 1993 On the estimation of hyperparameters in Bayesian approach of solving inverse problems IEEE Int. Conf. ICASSP Acoustics, Speech, and Signal Processing vol 5 pp 495-8
41. Mohammad-Djafari A 1996 Joint estimation of parameters in a Bayesian approach of solving inverse problems Proc. IEEE Int. Conf. on Image Processing (Lausanne, Switzerland) vol 2 pp 473-76
42. Molina R, Katsaggelos A K and Mateos J 1999 Bayesian and regularization methods for hyperparameter estimation in image restoration IEEE Trans. Image Process. 8 31-46
43. Nash S G and Sofer A 1996 A linear and nonlinear programming McGraw-Hill Industrial Engineering Series
44. Ntziachristos V, Chance B and Yodh A G 1999 Differential diffuse optical tomography Opt. Exp. 5 230-42
45. Ntziachristos V, Yodh A G, Schnall M and Chance B 2000 Concurrent MRI and diffuse optical tomography of breast after Indocyanine Green enhancement Proc. Natl. Acad. Sci. USA 97 2767-80
46. Ntziachristos V, Yodh A G, Schnall M and Chance B 2002 MRI-guided diffuse optical spectroscopy of malignant and benign breast legions Neoplasia 4 347-54
47. Oh S, Milstein A B, Millane R P, Bouman C A and Webb K J 2002 Source-detector calibration in three-dimensional Bayesian optical diffusion tomography J. Opt. Soc. Am. A 19 1983-93
48. O'Leary M A 1996 Imaging with diffuse photon density waves PhD Thesis University of Pennsylvania
49. O'Leary M A, Boas D A, Chance B and Yodh A G 1995 Experimental images of heterogeneous turbid media by frequency-domain diffusing-photon tomography Opt. Lett. 20 426-28
50. Paulsen K D and Jiang H 1996 Enhanced frequency domain optical image reconstruction in tissues through total variation minimization Appl. Opt. 35 3447-58
51. Pogue B W, McBride T O, Prewitt J, Osterberg U L and Paulsen K D 1999 Spatially varying regularization improves diffuse optical tomography Appl. Opt. 38 2950-61
52. Pogue B W and Paulsen K D 1998 High-resolution near-infrared tomographic imaging simulations of the rat cranium by use of a priori magnetic resonance imaging structural information Opt. Lett. 23 1716-18
53. Polak E and Ribière G 1969 Note sur la convergence de directions conjugèes Rev. Francaise Informat Recherche Opertionelle, 3 eannèe 16 35-43
54. Polyak B T 1969 The conjugate gradient method in extremem problems USSR Comput. Math. Phys. 9 94-112
55. Quaresima V, Lepanto R and Ferrari M 2003 The use of near infrared spectroscopy in sports medicine J. Sports Med. Phys. Fit. 43 1-13
56. Schnall M D 2003 Breast MR imaging Radiol. Clin. North Am. 41 43-50
57. Schweiger M and Arridge S R 1999 Optical tomographic reconstruction in a complex head model using a priori region boundary information Phys. Med. Biol. 44 2703-21
58. Srinivasan S, Pogue B, Jiang S, Dehghani H, Kogel C, Soho S, Gibson J J, Tosteson T D, Poplack S P and Paulsen K D 2003 Interpreting hemoglobin and water concentration, oxygen saturation, and scattering measured in vivo by near-infrared breast tomography Proc. Natl Acad. Sci. 100 12349-54
59. Strangman G, Boas D and Sutton J 2002 Non-invasive neuroimaging using near-infrared light Biol. Psychiatry 52 679-93
60. Utsugi A 1997 Hyperparameter selection for self-organizing maps Neural Comput. 9 623-35
61. Villringer A and Chance B 1997 Non-invasive optical spectroscopy and imaging of human brain function Trends Neurosci. 20 435-42
62. Weissleder R and Ntziachristos V 2003 Shedding light onto live molecular targets Nat. Med. 9 123-8
63. Xu H, Dehghani H, Pogue B W, Paulsen K D and Dunn J D 2002 Hybrid MR/Near infrared imaging of the muribe brain: optimization of optical fiber arrangement and use of a priori knowledge Proc. IEEE Int. Symp. on Biomedical Imaging pp 74-7
64. Yao Y, Wang Y, Pei Y, Zhu W and Barbour R L 1997 Frequency domain optical imaging of absorption and scattering distributions by a Born iterative method J. Opt. Soc. Am. A 14 325-42
65. Ye J C, Bouman C A, Webb K J and Millane R P 2001 Nonlinear multigrid algorithms for Bayesian optical diffusion tomography IEEE Trans. Image Process. 10 909-22
66. Yodh A G and Chance B 1995 Spectroscopy and imaging with diffusing light Phys. Today 48 34-40
67. Zhou Z, Leahy R M and Mumcuoglu E U 1994 Simultaneous hyperparameter estimation and Bayesian image reconstruction for PET 1994 IEEE Conference Record Nuclear Science Symp. and Medical Imaging Conf. vol 4 pp 1604-08
68. Zhu Q, Chen N and Kurtzman S H 2003a Imaging tumor angiogenesis by use of combined near-infrared diffusive light and ultrasound Opt. Lett. 28 337-9
69. Zhu Q, Huang M, Chen N, Zarfos K, Jagjivan B, Kane M, Hedge P and Kurtzman S H 2003b Ultrasound-guided optical tomographic imaging of malignant and benign breast lesions: initial clinical results of 19 cases Neoplasia 5 379-88