Phenotypic characterization and nuclear microsatellite analysis reveal genomic changes and rearrangements underlying androgenesis in tetraploid potatoes (Solanum tuberosum L.)

Euphytica

Volumn 171, Issue 3, 2010, Pages 313-326

  Sharma, Sushruti ^a   Sarkar, Debabrata ^a,b   Pandey, Suman Kumar ^a  

^a CENTRAL POTATO RESEARCH INSTITUTE   (India)

^b CENTRAL RESEARCH INSTITUTE FOR JUTE AND ALLIED FIBRES   (India)

Author keywords

(Di)haploid; Androgenesis; Anther culture; Microsatellite; Nuclear DNA content; Phenotyping; Potato; Simple sequence repeats; Solanum tuberosum L

Indexed keywords

SOLANUM TUBEROSUM;

EID: 76149139414     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-009-9983-7     Document Type: Article

References (51)

1. Arumuganathan K, Earle ED (1991) Estimation of nuclear DNA content of plants by flow cytometry. Plant Mol Biol Rep 9: 229-241.
2. Ashkenazi V, Chani E, Lavi U, Levy D, Hillel J, Veilleux RE (2001) Development of microsatellite markers in potato and their use in phylogenetic and fingerprinting analyses. Genome 44: 50-62.
3. Bastiaanssen HJM, Ramanna MS, Sawor Z, Mincione A, Steen AVD, Jacobsen E (1996) Pollen markers for gene centromere mapping in diploid potato. Theor Appl Genet 93: 1040-1047.
4. Bertsch C, Kieffer F, Maillot P, Farine S, Butterlin G, Merdinoglu D, Walter B (2005) Genetic chimerism of Vitis vinifera cv. Chardonnay 96 is maintained through organogenesis but not somatic embryogenesis. BMC Plant Biol 5: 20.
5. Birhman RK, Rivard SR, Cappadocia M (1994) Restriction fragment length polymorphism analysis of anther-culture-derived Solanum chacoense. HortScience 29: 206-208.
6. Calleberg E (1996) Anther culture of potato. Dissertation, Swedish University of Agricultural Sciences.
7. Campbell CL, Madden LV (1990) Introduction to plant disease epidemiology. Wiley, New York.
8. Cappadocia M, Ramulu KS (1998) Anther culture in potato improvement. In: Paul Khurana SM, Chandra R, Upadhya MD (eds) Comprehensive potato biotechnology. Malhotra Publishing House, New Delhi, pp 1-30.
9. Chani E, Veilleux RE, Boluarte-Medina T (2000) Improved androgenesis of interspecific potato and efficiency of SSR markers to identify homozygous regenerants. Plant Cell Tissue Organ Cult 60: 101-112.
10. Chani E, Ashkenazi V, Hillel J, Veilleux RE (2002) Microsatellite marker analysis of an anther-derived potato family: skewed segregation and gene-centromere mapping. Genome 45: 236-242.
11. Clulow SA, Wilkinson MJ, Waugh R, Baird E, DeMaine MJ, Powell W (1991) Cytological and molecular observations on Solanum phureja-induced dihaploid potatoes. Theor Appl Genet 82: 545-551.
12. Cullis CA (1990) DNA rearrangements in response to environmental stress. Adv Genet 28: 73-97.
13. De Maine MJ (1984) Patterns of variation in potato dihaploid families. Potato Res 27: 1-11.
14. Ghislain M, Andrade D, RodrÃguez F, Hijmans RJ, Spooner DM (2006) Genetic analysis of the cultivated potato Solanum tuberosum L. Phureja group using RAPDs and nuclear SSRs. Theor Appl Genet 113: 1515-1527.
15. Grammatikaki G, Avgelis A, Sonnino A (2007) Behavior of potato gametoclonal plants against the necrotic strain of potato Y potyvirus. Russian J Plant Physiol 54: 507-512.
16. Heberle-Bors E (1985) In vitro haploid formation from pollen: a critical review. Theor Appl Genet 71: 361-374.
17. Jacobsen E, Ramanna MS (1994) Production of monohaploids of Solanum tuberosum L. and their use in genetics, molecular biology and breeding. In: Bradshaw JE, Mackay GR (eds) Potato genetics. CAB International, Wallingford, pp 155-170.
18. Kotch GP, Ortiz R, Peloquin SJ (1992) Genetic analysis by use of potato haploid populations. Genome 35: 103-108.
19. Lough RC, Varrieur JM, Veilleux RE (2001) Selection inherent in monoploid derivation mechanisms for potato. Theor Appl Genet 103: 178-184.
20. Luo ZW, Zhang RM, Kearsey MJ (2004) Theoretical basis for genetic linkage analysis in autotetraploid species. Proc Natl Acad Sci USA 101: 7040-7045.
21. Matsubayashi M (1979) Genetic variation in dihaploid potato clones, with special reference to phenotypic segregations in some characters (preliminary report). Sci Rep Fac Agr Kobe Univ 13: 185-192.
22. McGregor CE, Lambert CA, Greyling MM, Louw JH, Warnich L (2000) A comparative assessment of DNA finger-printing techniques (RAPD, ISSR, AFLP and SSR) in tetraploid potato (Solanum tuberosum L.) germplasm. Euphytica 113: 135-144.
23. Meyer R, Salamini F, Uhring H (1993) Isolation and characterization of potato diploid clones generating a high frequency of monohaploid or homozygous diploid androgenic plants. Theor Appl Genet 85: 905-912.
24. Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol Plant 15: 473-497.
25. Murigneux A, Barloy D, Leroy P, Beckert M (1993) Molecular and morphological evaluation of doubled haploid lines in maize. 1. Homogeneity within DH lines. Theor Appl Genet 86: 837-842.
26. Naik PS, Sarkar D, Gaur PC (1998) Yield components of potato microtubers: in vitro production and field performance. Ann Appl Biol 133: 91-99.
27. Paz MM, Veilleux RE (1999) Influence of culture medium and in vitro conditions on shoot regeneration in Solanum phureja monoploids and fertility of regenerated doubled monoploids. Plant Breed 118: 53-57.
28. Pehu E, Veilleux RE, Hilu KW (1987) Cluster analysis of anther-derived plants of Solanum phureja (Solanaceae) based on morphological characteristics. Am J Bot 74: 47-52.
29. Phumichai C, Mori M, Kobayashi A, Kamijima O, Hosaka K (2005) Toward the development of highly homozygous diploid potato lines using the self-compatibility controlling Sli gene. Genome 48: 977-984.
30. Rivard SR, Saba-El-Leil MK, Landry BS, Cappadocia M (1994) RFLP analyses and segregation of molecular markers in plants produced by in vitro anther culture, selfing, and reciprocal crosses of two lines of self-incompatible Solanum chacoense. Genome 37: 775-783.
31. Rivard SR, Cappadocia M, Landry BS (1996) A comparison of RFLP maps based on anther culture derived, selfed, and hybrid progenies of Solanum chacoense. Genome 39: 611-621.
32. Rokka V-M, Valkonen JPT, Pehu E (1995) Production and characterization of haploids derived from somatic hybrids between Solanum brevidens and S. tuberosum through anther culture. Plant Sci 112: 85-95.
33. Rokka V-M, Pietila L, Pehu E (1996) Enhanced production of dihaploid lines via anther culture of tetraploid potato (Solanum tuberosum L. ssp. tuberosum) clones. Am Potato J 73: 1-12.
34. Rokka V-M, Ishimaru CA, Lapitan NLV, Pehu E (1998) Production of androgenic dihaploid lines of the disomic tetraploid potato species Solanum acaule ssp. acaule. Plant Cell Rep 18: 89-93.
35. Ross H (1986) Potato breeding-problems and perspectives. Verlag Paul Parey, Berlin.
36. Saghai-Maroof MA, Soliman KM, Jorgensen RA, Allard RW (1984) Ribosomal DNA spacer-length polymorphisms in barley: mendelian inheritance, chromosomal locations, and population dynamics. Proc Natl Acad Sci USA 81: 8014-8018.
37. Samitsu Y, Hosaka K (2002) Molecular marker analysis of 24- and 25-chromosome plants obtained from Solanum tuberosum L. ssp. andigena (2n = 4x = 48) pollinated with a Solanum phureja haploid inducer. Genome 45: 577-583.
38. Sanguinetti CJ, Dias Neto E, Simpson AJG (1994) Rapid silver staining and recovery of PCR products separated on polyacrylamide gels. Biotechniques 17: 915-919.
39. Sarkar D, Maity S, Das PK (2004a) Induction of androgenic embryoids from anther culture of Madhuca indica. J Trop For Sci 16: 429-436.
40. Sarkar D, Pandey SK, Sud KC, Chanemougasoundharam A (2004b) In vitro characterization of manganese toxicity in relation to phosphorus nutrition in potato (Solanum tuberosum L.). Plant Sci 167: 977-986.
41. Sharma S, Chanemougasoundharam A, Sarkar D, Pandey SK (2004) Carboxylic acids affect induction, development and quality of potato (Solanum tuberosum L.) microtubers grown in vitro from single-node explants. Plant Growth Regul 44: 219-229.
42. Singh AK, Uhrig H, Salamini F (1988) Implications of chromosome pairing in a monoploid and its colchidiploid of Solanum tuberosum (x = 12). Genome 30: 347-351.
43. Song Y-S, Hepting L, Schweizer G, Hartl L, Wenzel G, Schwarzfischer A (2005) Mapping of extreme resistance to PVY (Rysto) on chromosome XII using anther-culture-derived primary dihaploid potato lines. Theor Appl Genet 111: 879-887.
44. Uijtewaal BA, Jacobsen E, Hermsen JGTh (1987) Morphology and vigour of monohaploids potato clones, their corresponding homozygous diploids and tetraploids and their heterozygous diploid parent. Euphytica 36: 745-753.
45. Valdes M, Slatkin M, Freimer NB (1993) Allele frequencies at microsatellite loci: the stepwise mutation model revisited. Genetics 133: 737-749.
46. Valkonen JPT (1994) Nuclear DNA content of the Solanum spp. in the series etuberosa as determined by laser flow cytometry. Ann Appl Biol 125: 589-600.
47. Veilleux RE, Shen LY, Paz MM (1995) Analysis of the genetic composition of anther-derived potato by randomly amplified polymorphic DNA and simple sequence repeats. Genome 38: 1153-1162.
48. Watanabe K, Orrillo M, Vega S, Masuelli R, Ishiki K (1994) Potato germplasm enhancement with disomic tetraploid Solanum acaule. II. Assessment to breeding value of tetraploid F1 hybrids between S. acaule and tetrasomic tetraploid potatoes. Theor Appl Genet 88: 135-140.
49. Waugh R, Baird E, Powell W (1992) The use of RAPD markers for the detection of gene introgression in potato. Plant Cell Rep 11: 466-469.
50. Wenzel G (1994) Tissue culture. In: Bradshaw E, Mackay GR (eds) Potato genetics. CAB International, Wallingford, pp 173-195.
51. Wilkinson MJ, Bennett ST, Clulow SA, Allainguillaume J, Harding K, Bennett MD (1995) Evidence for somatic translocation during potato dihaploid induction. Heredity 74: 146-151.