Molecular characterization and therapeutic potential of a marine bacterium Pseudoalteromonas sp. KMM 701 α-galactosidase

Marine Biotechnology

Volumn 12, Issue 1, 2010, Pages 111-120

  Balabanova, Larissa A ^a   Bakunina, Irina Yu ^a   Nedashkovskaya, Olga I ^a   Makarenkova, Ilona D ^b   Zaporozhets, Tatiana S ^b   Besednova, Natalia N ^b   Zvyagintseva, Tatiana N ^a   Rasskazov, Valery A ^a  

^a PACIFIC INSTITUTE OF BIOORGANIC CHEMISTRY   (Russian Federation)

^b Institute of Epidemiology and Microbiology   (Russian Federation)

Author keywords

Galactosidase; Adhesion inhibition; B red blood cells conversion; Corynebacterium diphtheria; Marine bacteria; Pseudoalteromonas

Indexed keywords

CORYNEBACTERIUM; GALACTOSIDASES; MARINE BACTERIUM; PSEUDOALTEROMONAS; RED BLOOD CELL;

ADHESION; AMINO ACIDS; BACTERIOLOGY; BLOOD; CELL MEMBRANES; ENZYME ACTIVITY; ENZYMES; GENE EXPRESSION; HEMOGLOBIN OXYGEN SATURATION; ORGANIC ACIDS; PLANTS (BOTANY); POTENTIOMETRIC SENSORS; SUGARS;

BACTERIA;

ALPHA GALACTOSIDASE;

AMINO ACID; BACTERIUM; BIOTECHNOLOGY; BLOOD; CYTOLOGY; ENZYME ACTIVITY; MEDICINE; MOLECULAR ANALYSIS; PH;

AMINO ACID SEQUENCE; ARTICLE; CELL ADHESION; CHEMISTRY; CORYNEBACTERIUM DIPHTHERIAE; CYTOLOGY; DRUG EFFECT; ENZYME ACTIVATION; ENZYMOLOGY; METABOLISM; MOLECULAR GENETICS; PHYSIOLOGY; PSEUDOALTEROMONAS; STRUCTURE ACTIVITY RELATION;

ALPHA-GALACTOSIDASE; AMINO ACID SEQUENCE; CELL ADHESION; CORYNEBACTERIUM DIPHTHERIAE; ENZYME ACTIVATION; MOLECULAR SEQUENCE DATA; PSEUDOALTEROMONAS; STRUCTURE-ACTIVITY RELATIONSHIP;

BACTERIA (MICROORGANISMS); CORYNEBACTERIUM DIPHTHERIAE; PSEUDOALTEROMONAS; PSEUDOALTEROMONAS SP.;

EID: 76149123184     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-009-9205-2     Document Type: Article

References (28)

1. Bakunina IY, Ivanova EP, Nedashkovskaya OE, Gorshkova NM, Elyakova LA, Mikhailov VV (1996) Screening for α-galactosidase producers among marine bacteria of the genus Alteromonas. Prikl Biokh Mikrobiol 32: 624-628 (in Russian).
2. Bakunina IY, Sova VV, Nedashkovskaya OI, Kuhlmann RA, Likhosherstov LM, Martynova MD, Mihailov VV, Elyakova LA (1998) α-Galactosidase of the marine bacterium Pseudoalteromonas sp. KMM 701. Biochemistry (Moscow) 63: 1209-1215.
3. Brilis VI, Brilene TA, Lenzner KP, Lenzner AA (1986) A method for studying the microorganism adhesion. Lab Delo 4: 210-212.
4. Chien S-F, Chen S-H, Chien M-Y (2008) Cloning, expression, and characterization of rice α-galactosidase. Plant Mol Biol Rep 26: 213-224.
5. Cisar JO, Takahashi Y, Ruhl S, Donkersloot JA, Sandberg AL (1997) Specific inhibitors of bacterial adhesion: observations from the study of gram-positive bacteria that initiate biofilm formation on the tooth surface. Adv Dent Res 11: 168-175.
6. Comfort DA, Bobrov KS, Ivanen DR, Shabalin KA, Harris JM, Kulminskaya AA, Brumer H, Kelly RM (2007) Biochemical analysis of Thermotoga maritima GH36 alpha-galactosidase (TmGalA) confirms the mechanistic commonality of clan GH-D glycoside hydrolases. Biochemistry 46: 3319-3330.
7. Felsenstein J (2004) PHYLIP (Phylogeny Inference Package) version 3. 6. University of Washington, Seattle, Department of Genetic http://evolution. genetics. washington. edu/phylip/.
8. Ivanova EP, Bakunina IY, Nedashkovskaya OI, Gorshkova NM, Mikhailov VV, Elyakova LA (1998) Distribution of marine microorganisms producing β-N-acetylglucosaminidase, α-galactosidase, α-N-acetylgalactosaminidase. Biologiya Morya 24: 351-358.
9. Ivanova EP, Sawabe T, Alexeeva YV, Lysenko AM, Gorshkova NM, Hayashi K, Zukova NV, Christen R, Mikhailov VV (2002) Pseudoalteromonas issachenkonii sp. nov., a bacterium that degrades the thallus of the brown alga Fucus evanescens. Int J Syst Evol Microbiol 52: 229-234.
10. Ivanova EP, Bakunina IY, Nedashkovskaya OI, Gorshkova NM, Alexeeva YV, Zelepuga EA, Zvaygintseva TN, Nicolau DV, Mikhailov VV (2003) Ecophysiological variabilities in ectohydrolytic enzyme activities of some Pseudoalteromonas species, P. citrea, P. issachenkonii, and P. nigrifaciens. Curr Microbiol 46: 6-10.
11. Kruskall MS, AuBuchon JP, Anthony KY, Herschel L, Pickard C, Biehl R, Horowitz M, Brambilla DJ, Popovsky MA (2000) Transfusion to blood group A and O patients of group B RBCs that have been enzymatically converted to group O. Transfusion 40: 1285-1289.
12. Kusaykin MI, Bakunina IY, Sova VV, Ermakova SP, Kuznetsova TS, Besednova NN, Zaporozhets TS, Zvyagintseva TN (2008) Structure and biological action of the polysaccharides and products of their transformation. J Biotechnol 3: 904-915.
13. Liu QP, Yuan H, Bennett EP, Levery SB, Nudelman E, Spence J, Pietz G, Saunders K, White T, Olsson ML, Henrissat B, Sulzenbacher G, Clausen H (2008) Identification of a GH110 subfamily of 1, 3-galactosidases: novel enzymes for removal of the α-3Gal xenotransplantation antigen. J Biol Chem 283: 8545-8554.
14. Lowry OH, Rosebrough NJ, Farr AL, Randall RJ (1951) Protein measurement with the Folin phenol reagent. J Biol Chem 193: 265-275.
15. Mai-Prochnow A, Evans F, Dalisay-Saludes D, Stelzer S, Egan S, James S, Webb JS, Kjelleberg S (2004) Biofilm development and cell death in the marine bacterium Pseudoalteromonas tunicate. Appl Environ Microbiol 70: 3232-3238.
16. Marmur J (1961) A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3: 208-218.
17. Marmur J, Doty P (1962) Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5: 109-118.
18. Mattos-Guaraldi AL, Duarte Formiga LC, Pereira GA (2000) Cell surface components and adhesion in Corynebacterium diphtheriae. Microbes Infect 2: 1507-1512.
19. Naumoff DG (2003) Phylogenetic analysis of α-galactosidases of the GH27 family. J Mol Biol 38: 388-399.
20. Nedashkovskaya OI, Kim SB, Han SK, Lysenko AM, Rohde M, Rhee M-S, Frolova GM, Falsen E, Mikhailov VV, Bae KS (2004) Maribacter gen. nov., a new member of the family Flavobacteriaceae, isolated from marine habitats, containing the species Maribacter sedimenticola sp. nov., Maribacter aquivivus sp. nov., Maribacter orientalis sp. nov., and Maribacter ulvicola sp. nov. Int J Syst Evol Microbiol 54: 1031-1037.
21. Nedashkovskaya OI, Kim SB, Shin DS, Beleneva IA, Vancanneyt M, Mikhailov VV (2007) Echinicola vietnamensis sp. nov., a new bacterium of the phylum Bacteroidetes isolated from sea water. Int J Syst Evol Microbiol 57: 761-763.
22. Nelson TE (1944) A photometric adaptation of the Somogyi method for the determination of glucose. J Biol Chem 153: 375-381.
23. Olsson ML, Clausen H (2008) Modifying the red cell surface: towards an ABO universal blood supply. Br J Haematol 140: 13-12.
24. Olsson ML, Hill CA, de la Vega H, Liu QP, Stroud MR, Valdinocci J, Moon S, Clausen H, Kruskall MS (2004) Universal red blood cells-enzymatic conversion of blood group A and B antigens. Transfus Clin Biol 11: 33-39.
25. Rudakova VY, Shevchenko NM, Elyakova LA (1985) Isolation and some properties of endo-β-1, 6-glucanase from marine bivalve Chlamys abbidus. Comp Biochem Physiol B 81: 677-682.
26. Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual, 3rd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
27. Zvyagintseva TN, Shevchenko NM, Chizhov AO, Krupnova TN, Sundukova EV, Isakov VV (2003) Water-soluble polysaccharides of some far-eastern brown seaweeds. Distribution, structure, and their dependence on the developmental conditions. J Exp Marine Biol Ecol 294: 1-13.
28. Zvyagintseva TN, Shevchenko NM, Nazarenko EL, Gorbach VI, Urvantseva AM, Kiseleva MI, Isakov VV (2005) Water-soluble polysaccharides of some brown algae of the Russian Far-East. Structure and biological action of low-molecular mass polyuronans. J Exp Mar Biol Ecol 320: 123-131.