메뉴 건너뛰기




Volumn 15, Issue 2, 2010, Pages 151-159

Novel RNA polymerase II mutation suppresses transcriptional fidelity and oxidative stress sensitivity in rpb9Δ yeast

Author keywords

[No Author keywords available]

Indexed keywords

ASPARTIC ACID; GLYCINE; MENADIONE; MUTANT PROTEIN; PROTEIN RBP1; PROTEIN RPB9; PROTEIN S II; PROTEIN SUBUNIT; RNA POLYMERASE II; TRANSCRIPTION ELONGATION FACTOR; UNCLASSIFIED DRUG;

EID: 75649134615     PISSN: 13569597     EISSN: 13652443     Source Type: Journal    
DOI: 10.1111/j.1365-2443.2009.01372.x     Document Type: Article
Times cited : (11)

References (38)
  • 1
    • 0030987775 scopus 로고    scopus 로고
    • Transcription elongation through DNA arrest sites. A multistep process involving both RNA polymerase II subunit RPB9 and TFIIS
    • Awrey DE, Weilbaecher RG, Hemming SA, Orlicky SM, Kane CM, Edwards AM. Transcription elongation through DNA arrest sites. A multistep process involving both RNA polymerase II subunit RPB9 and TFIIS. J. Biol. Chem. 1997, 272:14747-14754.
    • (1997) J. Biol. Chem. , vol.272 , pp. 14747-14754
    • Awrey, D.E.1    Weilbaecher, R.G.2    Hemming, S.A.3    Orlicky, S.M.4    Kane, C.M.5    Edwards, A.M.6
  • 2
    • 0022973817 scopus 로고
    • An RNA polymerase mutant with reduced accuracy of chain elongation
    • Blank A, Gallant JA, Burgess RR, Loeb LA. An RNA polymerase mutant with reduced accuracy of chain elongation. Biochemistry 1986, 25:5920-5928.
    • (1986) Biochemistry , vol.25 , pp. 5920-5928
    • Blank, A.1    Gallant, J.A.2    Burgess, R.R.3    Loeb, L.A.4
  • 3
    • 0036468364 scopus 로고    scopus 로고
    • Multisubunit RNA polymerases
    • Cramer P. Multisubunit RNA polymerases. Curr. Opin. Struct. Biol. 2002, 12:89-97.
    • (2002) Curr. Opin. Struct. Biol. , vol.12 , pp. 89-97
    • Cramer, P.1
  • 4
    • 0035827346 scopus 로고    scopus 로고
    • Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution
    • Cramer P, Bushnell DA, Kornberg RD. Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution. Science 2001, 292:1863-1876.
    • (2001) Science , vol.292 , pp. 1863-1876
    • Cramer, P.1    Bushnell, D.A.2    Kornberg, R.D.3
  • 5
    • 0037073048 scopus 로고    scopus 로고
    • Promoting elongation with transcript cleavage stimulatory factors
    • Fish RN, Kane CM. Promoting elongation with transcript cleavage stimulatory factors. Biochim. Biophys. Acta 2002, 1577:287-307.
    • (2002) Biochim. Biophys. Acta , vol.1577 , pp. 287-307
    • Fish, R.N.1    Kane, C.M.2
  • 6
    • 0035958552 scopus 로고    scopus 로고
    • Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation
    • Foster JE, Holmes SF, Erie DA. Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation. Cell 2001, 106:243-252.
    • (2001) Cell , vol.106 , pp. 243-252
    • Foster, J.E.1    Holmes, S.F.2    Erie, D.A.3
  • 9
    • 0034723392 scopus 로고    scopus 로고
    • Yeast RNA polymerase II subunit RPB9. Mapping of domains required for transcription elongation
    • Hemming SA, Edwards AM. Yeast RNA polymerase II subunit RPB9. Mapping of domains required for transcription elongation. J. Biol. Chem. 2000, 275:2288-2294.
    • (2000) J. Biol. Chem. , vol.275 , pp. 2288-2294
    • Hemming, S.A.1    Edwards, A.M.2
  • 11
    • 0026648570 scopus 로고
    • The RNA polymerase II ternary complex cleaves the nascent transcript in a 3′----5′ direction in the presence of elongation factor SII
    • Izban MG, Luse DS. The RNA polymerase II ternary complex cleaves the nascent transcript in a 3′----5′ direction in the presence of elongation factor SII. Genes Dev. 1992, 6:1342-1356.
    • (1992) Genes Dev. , vol.6 , pp. 1342-1356
    • Izban, M.G.1    Luse, D.S.2
  • 12
    • 44949166705 scopus 로고    scopus 로고
    • Properties of an intergenic terminator and start site switch that regulate IMD2 transcription in yeast
    • Jenks MH, O'Rourke TW, Reines D. Properties of an intergenic terminator and start site switch that regulate IMD2 transcription in yeast. Mol. Cell. Biol. 2008, 28:3883-3893.
    • (2008) Mol. Cell. Biol. , vol.28 , pp. 3883-3893
    • Jenks, M.H.1    O'Rourke, T.W.2    Reines, D.3
  • 13
    • 0030475226 scopus 로고    scopus 로고
    • Fidelity of RNA polymerase II transcription controlled by elongation factor TFIIS
    • Jeon C, Agarwal K. Fidelity of RNA polymerase II transcription controlled by elongation factor TFIIS. Proc. Natl. Acad. Sci. USA 1996, 93:13677-13682.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 13677-13682
    • Jeon, C.1    Agarwal, K.2
  • 14
    • 67349131535 scopus 로고    scopus 로고
    • Incorporation of 8-hydroxyguanosine (8-oxo-7,8-dihydroguanosine) 5′-triphosphate by bacterial and human RNA polymerases
    • Kamiya H, Suzuki A, Yamaguchi Y, Handa H, Harashima H. Incorporation of 8-hydroxyguanosine (8-oxo-7,8-dihydroguanosine) 5′-triphosphate by bacterial and human RNA polymerases. Free Radic. Biol. Med. 2009, 46:1703-1707.
    • (2009) Free Radic. Biol. Med. , vol.46 , pp. 1703-1707
    • Kamiya, H.1    Suzuki, A.2    Yamaguchi, Y.3    Handa, H.4    Harashima, H.5
  • 15
    • 44449103640 scopus 로고    scopus 로고
    • The RNA polymerase II trigger loop functions in substrate selection and is directly targeted by alpha-amanitin
    • Kaplan CD, Larsson KM, Kornberg RD. The RNA polymerase II trigger loop functions in substrate selection and is directly targeted by alpha-amanitin. Mol. Cell 2008, 30:547-556.
    • (2008) Mol. Cell , vol.30 , pp. 547-556
    • Kaplan, C.D.1    Larsson, K.M.2    Kornberg, R.D.3
  • 16
    • 17844400790 scopus 로고    scopus 로고
    • Participation of Rho-dependent transcription termination in oxidative stress sensitivity caused by an rpoB mutation
    • Kawamura N, Kurokawa K, Ito T, Hamamoto H, Koyama H, Kaito C, Sekimizu K. Participation of Rho-dependent transcription termination in oxidative stress sensitivity caused by an rpoB mutation. Genes Cells 2005, 10:477-487.
    • (2005) Genes Cells , vol.10 , pp. 477-487
    • Kawamura, N.1    Kurokawa, K.2    Ito, T.3    Hamamoto, H.4    Koyama, H.5    Kaito, C.6    Sekimizu, K.7
  • 17
    • 0043244876 scopus 로고    scopus 로고
    • Architecture of the RNA polymerase II-TFIIS complex and implications for mRNA cleavage
    • Kettenberger H, Armache KJ, Cramer P. Architecture of the RNA polymerase II-TFIIS complex and implications for mRNA cleavage. Cell 2003, 114:347-357.
    • (2003) Cell , vol.114 , pp. 347-357
    • Kettenberger, H.1    Armache, K.J.2    Cramer, P.3
  • 19
    • 0142186288 scopus 로고    scopus 로고
    • Transcription elongation factor S-II maintains transcriptional fidelity and confers oxidative stress resistance
    • Koyama H, Ito T, Nakanishi T, Kawamura N, Sekimizu K. Transcription elongation factor S-II maintains transcriptional fidelity and confers oxidative stress resistance. Genes Cells 2003, 8:779-788.
    • (2003) Genes Cells , vol.8 , pp. 779-788
    • Koyama, H.1    Ito, T.2    Nakanishi, T.3    Kawamura, N.4    Sekimizu, K.5
  • 20
    • 34249726498 scopus 로고    scopus 로고
    • Stimulation of RNA polymerase II transcript cleavage activity contributes to maintain transcriptional fidelity in yeast
    • Koyama H, Ito T, Nakanishi T, Sekimizu K. Stimulation of RNA polymerase II transcript cleavage activity contributes to maintain transcriptional fidelity in yeast. Genes Cells 2007, 12:547-559.
    • (2007) Genes Cells , vol.12 , pp. 547-559
    • Koyama, H.1    Ito, T.2    Nakanishi, T.3    Sekimizu, K.4
  • 21
    • 0031684847 scopus 로고    scopus 로고
    • Mutations in RNA polymerase II and elongation factor SII severely reduce mRNA levels in Saccharomyces cerevisiae
    • Lennon JC, Wind M, Saunders L, Hock MB, Reines D. Mutations in RNA polymerase II and elongation factor SII severely reduce mRNA levels in Saccharomyces cerevisiae. Mol. Cell. Biol. 1998, 18:5771-5779.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 5771-5779
    • Lennon, J.C.1    Wind, M.2    Saunders, L.3    Hock, M.B.4    Reines, D.5
  • 22
    • 1942421800 scopus 로고    scopus 로고
    • Genetic interactions of DST1 in Saccharomyces cerevisiae suggest a role of TFIIS in the initiation-elongation transition
    • Malagon F, Tong AH, Shafer BK, Strathern JN. Genetic interactions of DST1 in Saccharomyces cerevisiae suggest a role of TFIIS in the initiation-elongation transition. Genetics 2004, 166:1215-1227.
    • (2004) Genetics , vol.166 , pp. 1215-1227
    • Malagon, F.1    Tong, A.H.2    Shafer, B.K.3    Strathern, J.N.4
  • 23
    • 15244358670 scopus 로고    scopus 로고
    • Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo
    • Mason PB, Struhl K. Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo. Mol. Cell 2005, 17:831-840.
    • (2005) Mol. Cell , vol.17 , pp. 831-840
    • Mason, P.B.1    Struhl, K.2
  • 24
    • 0028969426 scopus 로고
    • Structure-function relationship of yeast S-II in terms of stimulation of RNA polymerase II, arrest relief, and suppression of 6-azauracil sensitivity
    • Nakanishi T, Shimoaraiso M, Kubo T, Natori S. Structure-function relationship of yeast S-II in terms of stimulation of RNA polymerase II, arrest relief, and suppression of 6-azauracil sensitivity. J. Biol. Chem. 1995, 270:8991-8995.
    • (1995) J. Biol. Chem. , vol.270 , pp. 8991-8995
    • Nakanishi, T.1    Shimoaraiso, M.2    Kubo, T.3    Natori, S.4
  • 25
    • 33644746221 scopus 로고    scopus 로고
    • RNA polymerase II subunit Rpb9 is important for transcriptional fidelity in vivo
    • Nesser NK, Peterson DO, Hawley DK. RNA polymerase II subunit Rpb9 is important for transcriptional fidelity in vivo. Proc. Natl Acad. Sci. USA 2006, 103:3268-3273.
    • (2006) Proc. Natl Acad. Sci. USA , vol.103 , pp. 3268-3273
    • Nesser, N.K.1    Peterson, D.O.2    Hawley, D.K.3
  • 26
    • 0029862975 scopus 로고    scopus 로고
    • Mutations in the second largest subunit of RNA polymerase II cause 6-azauracil sensitivity in yeast and increased transcriptional arrest in vitro
    • Powell W, Reines D. Mutations in the second largest subunit of RNA polymerase II cause 6-azauracil sensitivity in yeast and increased transcriptional arrest in vitro. J. Biol. Chem. 1996, 271:6866-6873.
    • (1996) J. Biol. Chem. , vol.271 , pp. 6866-6873
    • Powell, W.1    Reines, D.2
  • 27
    • 0025099591 scopus 로고
    • RNA polymerase II mutants defective in transcription of a subset of genes
    • Scafe C, Nonet M, Young RA. RNA polymerase II mutants defective in transcription of a subset of genes. Mol. Cell. Biol. 1990, 10:1010-1016.
    • (1990) Mol. Cell. Biol. , vol.10 , pp. 1010-1016
    • Scafe, C.1    Nonet, M.2    Young, R.A.3
  • 28
    • 0037025387 scopus 로고    scopus 로고
    • Use of an in vivo reporter assay to test for transcriptional and translational fidelity in yeast
    • Shaw RJ, Bonawitz ND, Reines D. Use of an in vivo reporter assay to test for transcriptional and translational fidelity in yeast. J. Biol. Chem. 2002, 277:24420-24426.
    • (2002) J. Biol. Chem. , vol.277 , pp. 24420-24426
    • Shaw, R.J.1    Bonawitz, N.D.2    Reines, D.3
  • 29
    • 5444225805 scopus 로고    scopus 로고
    • Elongation by RNA polymerase II: the short and long of it
    • Sims RJ, Belotserkovskaya R, Reinberg D. Elongation by RNA polymerase II: the short and long of it. Genes Dev. 2004, 18:2437-2468.
    • (2004) Genes Dev. , vol.18 , pp. 2437-2468
    • Sims, R.J.1    Belotserkovskaya, R.2    Reinberg, D.3
  • 30
    • 67449116330 scopus 로고    scopus 로고
    • Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA
    • Sydow JF, Brueckner F, Cheung AC, Damsma GE, Dengl S, Lehmann E, Vassylyev D, Cramer P. Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA. Mol. Cell 2009, 34:710-721.
    • (2009) Mol. Cell , vol.34 , pp. 710-721
    • Sydow, J.F.1    Brueckner, F.2    Cheung, A.C.3    Damsma, G.E.4    Dengl, S.5    Lehmann, E.6    Vassylyev, D.7    Cramer, P.8
  • 32
    • 0032524661 scopus 로고    scopus 로고
    • Transcriptional fidelity and proofreading by RNA polymerase II
    • Thomas MJ, Platas AA, Hawley DK. Transcriptional fidelity and proofreading by RNA polymerase II. Cell 1998, 93:627-637.
    • (1998) Cell , vol.93 , pp. 627-637
    • Thomas, M.J.1    Platas, A.A.2    Hawley, D.K.3
  • 33
    • 0037155793 scopus 로고    scopus 로고
    • The Rpb9 subunit of RNA polymerase II binds transcription factor TFIIE and interferes with the SAGA and elongator histone acetyltransferases
    • Van Mullem V, Wery M, Werner M, Vandenhaute J, Thuriaux P. The Rpb9 subunit of RNA polymerase II binds transcription factor TFIIE and interferes with the SAGA and elongator histone acetyltransferases. J. Biol. Chem. 2002, 277:10220-10225.
    • (2002) J. Biol. Chem. , vol.277 , pp. 10220-10225
    • Van Mullem, V.1    Wery, M.2    Werner, M.3    Vandenhaute, J.4    Thuriaux, P.5
  • 35
    • 66349138227 scopus 로고    scopus 로고
    • Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution
    • Wang D, Bushnell DA, Huang X, Westover KD, Levitt M, Kornberg RD. Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution. Science 2009, 324:1203-1206.
    • (2009) Science , vol.324 , pp. 1203-1206
    • Wang, D.1    Bushnell, D.A.2    Huang, X.3    Westover, K.D.4    Levitt, M.5    Kornberg, R.D.6
  • 36
    • 33751235874 scopus 로고    scopus 로고
    • Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
    • Wang D, Bushnell DA, Westover KD, Kaplan CD, Kornberg RD. Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis. Cell 2006, 127:941-954.
    • (2006) Cell , vol.127 , pp. 941-954
    • Wang, D.1    Bushnell, D.A.2    Westover, K.D.3    Kaplan, C.D.4    Kornberg, R.D.5
  • 37
    • 8344234112 scopus 로고    scopus 로고
    • Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center
    • Westover KD, Bushnell DA, Kornberg RD. Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell 2004, 119:481-489.
    • (2004) Cell , vol.119 , pp. 481-489
    • Westover, K.D.1    Bushnell, D.A.2    Kornberg, R.D.3
  • 38
    • 0026059285 scopus 로고
    • Yeast RNA polymerase II subunit RPB9 is essential for growth at temperature extremes
    • Woychik NA, Lane WS, Young RA. Yeast RNA polymerase II subunit RPB9 is essential for growth at temperature extremes. J. Biol. Chem. 1991, 266:19053-19055.
    • (1991) J. Biol. Chem. , vol.266 , pp. 19053-19055
    • Woychik, N.A.1    Lane, W.S.2    Young, R.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.