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Volumn 16, Issue 2, 2010, Pages 253-258

Selections that optimize RNA display in the yeast three-hybrid system

Author keywords

Aptamer; Genetic selection; RNA folding; Yeast three hybrid system

Indexed keywords

RNA;

EID: 75149139964     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.1880410     Document Type: Review
Times cited : (14)

References (24)
  • 1
    • 0025122333 scopus 로고
    • Signal-mediated import of bacteriophage T7 RNA polymerase into the Saccharomyces cerevisiae nucleus and specific transcription of target genes
    • Benton BM, Eng WK, Dunn JJ, Studier FW, Sternglanz R, Fisher PA. 1990. Signal-mediated import of bacteriophage T7 RNA polymerase into the Saccharomyces cerevisiae nucleus and specific transcription of target genes. Mol Cell Biol 10: 353-360.
    • (1990) Mol Cell Biol , vol.10 , pp. 353-360
    • Benton, B.M.1    Eng, W.K.2    Dunn, J.J.3    Studier, F.W.4    Sternglanz, R.5    Fisher, P.A.6
  • 2
    • 0036354598 scopus 로고    scopus 로고
    • Analyzing mRNA-protein complexes using a yeast three-hybrid system
    • Bernstein DS, Buter N, Stumpf C, Wickens M. 2002. Analyzing mRNA-protein complexes using a yeast three-hybrid system. Methods 26: 123-141.
    • (2002) Methods , vol.26 , pp. 123-141
    • Bernstein, D.S.1    Buter, N.2    Stumpf, C.3    Wickens, M.4
  • 3
    • 15444365620 scopus 로고    scopus 로고
    • Binding specificity and mRNA targets of a C. elegans PUF protein, FBF-1
    • Bernstein D, Hook B, Hajarnavis A, Opperman L, Wickens M. 2005. Binding specificity and mRNA targets of a C. elegans PUF protein, FBF-1. RNA 11: 447-458.
    • (2005) RNA , vol.11 , pp. 447-458
    • Bernstein, D.1    Hook, B.2    Hajarnavis, A.3    Opperman, L.4    Wickens, M.5
  • 5
    • 0035957109 scopus 로고    scopus 로고
    • In vivo recognition of an RNA aptamer by its transcription factor target
    • Cassiday LA, Maher LJ III. 2001. In vivo recognition of an RNA aptamer by its transcription factor target. Biochemistry 40: 2433-2438.
    • (2001) Biochemistry , vol.40 , pp. 2433-2438
    • Cassiday, L.A.1    Maher III, L.J.2
  • 6
    • 0037390035 scopus 로고    scopus 로고
    • Yeast genetic selections to optimize RNA decoys for transcription factor NF-κB
    • Cassiday LA, Maher LJ III. 2003. Yeast genetic selections to optimize RNA decoys for transcription factor NF-κB. Proc Natl Acad Sci 100: 3930-3935.
    • (2003) Proc Natl Acad Sci , vol.100 , pp. 3930-3935
    • Cassiday, L.A.1    Maher III, L.J.2
  • 7
    • 12844273362 scopus 로고    scopus 로고
    • RNA-protein interactions in the yeast three-hybrid system: Affinity, sensitivity, and enhanced library screening
    • Hook B, Bernstein D, Zhang B, Wickens M. 2005. RNA-protein interactions in the yeast three-hybrid system: Affinity, sensitivity, and enhanced library screening. RNA 11: 227-233.
    • (2005) RNA , vol.11 , pp. 227-233
    • Hook, B.1    Bernstein, D.2    Zhang, B.3    Wickens, M.4
  • 9
    • 0345005029 scopus 로고
    • Improved predictions of secondary structures for RNA
    • Jaeger JA, Turner DH, Zuker M. 1989. Improved predictions of secondary structures for RNA. Proc Natl Acad Sci 86: 7706-7710.
    • (1989) Proc Natl Acad Sci , vol.86 , pp. 7706-7710
    • Jaeger, J.A.1    Turner, D.H.2    Zuker, M.3
  • 11
  • 12
    • 33947719235 scopus 로고    scopus 로고
    • Combining SELEX and the yeast threehybrid system for in vivo selection and classification of RNA aptamers
    • Konig J, Julius C, Baumann S, Homann M, Goringer HU, Feldbrugge M. 2007. Combining SELEX and the yeast threehybrid system for in vivo selection and classification of RNA aptamers. RNA 13: 614-622.
    • (2007) RNA , vol.13 , pp. 614-622
    • Konig, J.1    Julius, C.2    Baumann, S.3    Homann, M.4    Goringer, H.U.5    Feldbrugge, M.6
  • 13
    • 0033731918 scopus 로고    scopus 로고
    • Using the yeast three-hybrid system to detect and analyze RNA-protein interactions
    • Kraemer B, Zhang B, SenGupta D, Fields S, Wickens M. 2000. Using the yeast three-hybrid system to detect and analyze RNA-protein interactions. Methods Enzymol 328: 297-321.
    • (2000) Methods Enzymol , vol.328 , pp. 297-321
    • Kraemer, B.1    Zhang, B.2    SenGupta, D.3    Fields, S.4    Wickens, M.5
  • 14
    • 33645466699 scopus 로고    scopus 로고
    • Recognition of RNA by the p53 tumor suppressor protein in the yeast threehybrid system
    • Riley KJ, Cassiday LA, Kumar A, Maher LJ III. 2006. Recognition of RNA by the p53 tumor suppressor protein in the yeast threehybrid system. RNA 12: 620-630.
    • (2006) RNA , vol.12 , pp. 620-630
    • Riley, K.J.1    Cassiday, L.A.2    Kumar, A.3    Maher III, L.J.4
  • 15
    • 33746548327 scopus 로고    scopus 로고
    • A three-hybrid screen identifies mRNAs controlled by a regulatory protein
    • Seay D, Hook B, Evans K, Wickens M. 2006. A three-hybrid screen identifies mRNAs controlled by a regulatory protein. RNA 12: 1594-1600.
    • (2006) RNA , vol.12 , pp. 1594-1600
    • Seay, D.1    Hook, B.2    Evans, K.3    Wickens, M.4
  • 17
    • 0032900053 scopus 로고    scopus 로고
    • Identification of RNAs that bind to a specific protein using the yeast three-hybrid system
    • SenGupta DJ, Wickens M, Fields S. 1999. Identification of RNAs that bind to a specific protein using the yeast three-hybrid system. RNA 5: 596-601.
    • (1999) RNA , vol.5 , pp. 596-601
    • SenGupta, D.J.1    Wickens, M.2    Fields, S.3
  • 18
    • 0041355285 scopus 로고    scopus 로고
    • Identification of herpes simplex virus RNAs that interact specifically with regulatory protein ICP27 in vivo
    • Sokolowski M, Scott JE, Heaney RP, Patel AH, Clements JB. 2003. Identification of herpes simplex virus RNAs that interact specifically with regulatory protein ICP27 in vivo. J Biol Chem 278: 33540-33549.
    • (2003) J Biol Chem , vol.278 , pp. 33540-33549
    • Sokolowski, M.1    Scott, J.E.2    Heaney, R.P.3    Patel, A.H.4    Clements, J.B.5
  • 19
    • 1542467329 scopus 로고    scopus 로고
    • Use of threehybrid system to detect RNA-binding activity of alfalfa mosaic virus coat protein
    • Spiridonov VG, Smirnova SA, Mel'nichuk MD. 2003. Use of threehybrid system to detect RNA-binding activity of alfalfa mosaic virus coat protein. Ukr Biokhim Zh 75: 75-80.
    • (2003) Ukr Biokhim Zh , vol.75 , pp. 75-80
    • Spiridonov, V.G.1    Smirnova, S.A.2    Mel'nichuk, M.D.3
  • 20
    • 47949100841 scopus 로고    scopus 로고
    • A Caenorhabditis elegans PUF protein family with distinct RNA binding specificity
    • Stumpf CR, Kimble J, Wickens M. 2008. A Caenorhabditis elegans PUF protein family with distinct RNA binding specificity. RNA 14: 1550-1557.
    • (2008) RNA , vol.14 , pp. 1550-1557
    • Stumpf, C.R.1    Kimble, J.2    Wickens, M.3
  • 21
  • 23
    • 0036498828 scopus 로고    scopus 로고
    • A PUF family portrait: 3′UTR regulation as a way of life
    • Wickens M, Bernstein DS, Kimble J, Parker R. 2002. A PUF family portrait: 3′UTR regulation as a way of life. Trends Genet 18: 150-157.
    • (2002) Trends Genet , vol.18 , pp. 150-157
    • Wickens, M.1    Bernstein, D.S.2    Kimble, J.3    Parker, R.4
  • 24
    • 44149087131 scopus 로고    scopus 로고
    • Selection and characterization of anti-NF-κB p65 RNA aptamers
    • Wurster SE, Maher LJ III. 2008. Selection and characterization of anti-NF-κB p65 RNA aptamers. RNA 14: 1037-1047.
    • (2008) RNA , vol.14 , pp. 1037-1047
    • Wurster, S.E.1    Maher III, L.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.