메뉴 건너뛰기




Volumn 16, Issue 2, 2010, Pages 274-279

Evidence for bacterial origin of heat shock RNA-1

Author keywords

Bacterial sequence; Heat shock response; Heat shock RNA 1; Horizontal gene transfer

Indexed keywords

CHLORIDE CHANNEL; HEAT SHOCK RNA 1; UNCLASSIFIED DRUG; UNTRANSLATED RNA;

EID: 75149129127     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.1879610     Document Type: Article
Times cited : (15)

References (36)
  • 3
    • 0026456701 scopus 로고
    • The human XIST gene: Analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus
    • Brown CJ, Hendrich BD, Rupert JL, Lafreniere RG, Xing Y, Lawrence J, Willard HF. 1992. The human XIST gene: Analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus. Cell 71: 527-542.
    • (1992) Cell , vol.71 , pp. 527-542
    • Brown, C.J.1    Hendrich, B.D.2    Rupert, J.L.3    Lafreniere, R.G.4    Xing, Y.5    Lawrence, J.6    Willard, H.F.7
  • 4
    • 33845474731 scopus 로고    scopus 로고
    • Noncoding RNAs: Lost in translation?
    • Costa FF. 2007. Noncoding RNAs: Lost in translation? Gene 386: 1-10.
    • (2007) Gene , vol.386 , pp. 1-10
    • Costa, F.F.1
  • 6
    • 33745125901 scopus 로고    scopus 로고
    • The Xist RNA gene evolved in eutherians by pseudogenization of a protein-coding gene
    • Duret L, Chureau C, Samain S, Weissenbach J, Avner P. 2006. The Xist RNA gene evolved in eutherians by pseudogenization of a protein-coding gene. Science 312: 1653-1655.
    • (2006) Science , vol.312 , pp. 1653-1655
    • Duret, L.1    Chureau, C.2    Samain, S.3    Weissenbach, J.4    Avner, P.5
  • 7
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar RC. 2004. MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 9
    • 33744804277 scopus 로고    scopus 로고
    • The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator
    • Feng J, Bi C, Clark BS, Mady R, Shah P, Kohtz JD. 2006. The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator. Genes & Dev 20: 1470-1484.
    • (2006) Genes & Dev , vol.20 , pp. 1470-1484
    • Feng, J.1    Bi, C.2    Clark, B.S.3    Mady, R.4    Shah, P.5    Kohtz, J.D.6
  • 10
    • 33748303049 scopus 로고    scopus 로고
    • Non-coding-RNA regulators of RNA polymerase II transcription
    • Goodrich JA, Kugel JF. 2006. Non-coding-RNA regulators of RNA polymerase II transcription. Nat Rev Mol Cell Biol 7: 612-616.
    • (2006) Nat Rev Mol Cell Biol , vol.7 , pp. 612-616
    • Goodrich, J.A.1    Kugel, J.F.2
  • 12
    • 7244245762 scopus 로고    scopus 로고
    • Finishing the euchromatic sequence of the human genome
    • International Human Genome Sequencing Consortium
    • International Human Genome Sequencing Consortium. 2004. Finishing the euchromatic sequence of the human genome. Nature 431: 931-945.
    • (2004) Nature , vol.431 , pp. 931-945
  • 13
    • 0036226603 scopus 로고    scopus 로고
    • BLAT: The BLAST-like alignment tool
    • Kent WJ. 2002. BLAT: The BLAST-like alignment tool. Genome Res 12: 656-664.
    • (2002) Genome Res , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 16
    • 33646466965 scopus 로고    scopus 로고
    • Beating the heat: A translation factor and an RNA mobilize the heat shock transcription factor HSF1
    • Kugel JF, Goodrich JA. 2006. Beating the heat: A translation factor and an RNA mobilize the heat shock transcription factor HSF1. Mol Cell 22: 153-154.
    • (2006) Mol Cell , vol.22 , pp. 153-154
    • Kugel, J.F.1    Goodrich, J.A.2
  • 17
    • 45949109669 scopus 로고    scopus 로고
    • MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
    • Kumar S, Nei M, Dudley J, Tamura K. 2008. MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief Bioinform 9: 299-306.
    • (2008) Brief Bioinform , vol.9 , pp. 299-306
    • Kumar, S.1    Nei, M.2    Dudley, J.3    Tamura, K.4
  • 18
    • 36448991500 scopus 로고    scopus 로고
    • Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, et al. 2007. Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948
    • Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, et al. 2007. Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948.
  • 20
    • 39049085373 scopus 로고    scopus 로고
    • Wolbachia genome integrated in an insect chromosome: Evolution and fate of laterally transferred endosymbiont genes
    • Nikoh N, Tanaka K, Shibata F, Kondo N, Hizume M, Shimada M, Fukatsu T. 2008. Wolbachia genome integrated in an insect chromosome: Evolution and fate of laterally transferred endosymbiont genes. Genome Res 18: 272-280.
    • (2008) Genome Res , vol.18 , pp. 272-280
    • Nikoh, N.1    Tanaka, K.2    Shibata, F.3    Kondo, N.4    Hizume, M.5    Shimada, M.6    Fukatsu, T.7
  • 21
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson WR, Lipman DJ. 1988. Improved tools for biological sequence comparison. Proc Natl Acad Sci 85: 2444-2448.
    • (1988) Proc Natl Acad Sci , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 23
    • 70149123708 scopus 로고    scopus 로고
    • Ponjavic J, Oliver PL, Lunter G, Ponting CP. 2009. Genomic and transcriptional co-localization of protein-coding and long noncoding RNA pairs in the developing brain. PLoS Genet 5: e1000617. doi: 10.1371/journal/pgen.1000617.
    • Ponjavic J, Oliver PL, Lunter G, Ponting CP. 2009. Genomic and transcriptional co-localization of protein-coding and long noncoding RNA pairs in the developing brain. PLoS Genet 5: e1000617. doi: 10.1371/journal/pgen.1000617.
  • 24
    • 60149099385 scopus 로고    scopus 로고
    • Evolution and functions of long noncoding RNAs
    • Ponting CP, Oliver PL, Reik W. 2009. Evolution and functions of long noncoding RNAs. Cell 136: 629-641.
    • (2009) Cell , vol.136 , pp. 629-641
    • Ponting, C.P.1    Oliver, P.L.2    Reik, W.3
  • 25
    • 33846169089 scopus 로고    scopus 로고
    • Eukaryotic regulatory RNAs: An answer to the 'genome complexity' conundrum
    • Prasanth KV, Spector DL. 2007. Eukaryotic regulatory RNAs: An answer to the 'genome complexity' conundrum. Genes & Dev 21: 11-42.
    • (2007) Genes & Dev , vol.21 , pp. 11-42
    • Prasanth, K.V.1    Spector, D.L.2
  • 27
    • 70350690548 scopus 로고    scopus 로고
    • High-throughput detection and multiplex identification of cell contaminations
    • doi: 10.1093/nar/gkp581
    • Schmitt M, Pawlita M. 2009. High-throughput detection and multiplex identification of cell contaminations. Nucleic Acids Res 37: e119. doi: 10.1093/nar/gkp581.
    • (2009) Nucleic Acids Res , vol.37
    • Schmitt, M.1    Pawlita, M.2
  • 28
    • 0025008168 scopus 로고
    • Sequence logos: A new way to display consensus sequences
    • Schneider TD, Stephens RM. 1990. Sequence logos: A new way to display consensus sequences. Nucleic Acids Res 18: 6097-6100.
    • (1990) Nucleic Acids Res , vol.18 , pp. 6097-6100
    • Schneider, T.D.1    Stephens, R.M.2
  • 30
    • 36049020719 scopus 로고    scopus 로고
    • Noncoding RNAs: Couplers of analog and digital information in nervous system function?
    • St. Laurent G 3rd, Wahlestedt C. 2007. Noncoding RNAs: Couplers of analog and digital information in nervous system function? Trends Neurosci 30: 612-621.
    • (2007) Trends Neurosci , vol.30 , pp. 612-621
    • St. Laurent 3rd, G.1    Wahlestedt, C.2
  • 31
    • 75149156624 scopus 로고    scopus 로고
    • Swofford DL. 2002. PAUP*. Phylogenetic analysis using parsimony *and other methods, Version 4. In Sinaur Associates, Sunderland, MA
    • Swofford DL. 2002. PAUP*. Phylogenetic analysis using parsimony (*and other methods), Version 4. In Sinaur Associates, Sunderland, MA.
  • 32
    • 13444287893 scopus 로고    scopus 로고
    • Survival and persistence of opportunistic Burkholderia species in host cells
    • Valvano MA, Keith KE, Cardona ST. 2005. Survival and persistence of opportunistic Burkholderia species in host cells. Curr Opin Microbiol 8: 99-105.
    • (2005) Curr Opin Microbiol , vol.8 , pp. 99-105
    • Valvano, M.A.1    Keith, K.E.2    Cardona, S.T.3
  • 33
    • 0032509990 scopus 로고    scopus 로고
    • Location of enhancers is essential for the imprinting of H19 and Igf2 genes
    • Webber AL, Ingram RS, Levorse JM, Tilghman SM. 1998. Location of enhancers is essential for the imprinting of H19 and Igf2 genes. Nature 391: 711-715.
    • (1998) Nature , vol.391 , pp. 711-715
    • Webber, A.L.1    Ingram, R.S.2    Levorse, J.M.3    Tilghman, S.M.4
  • 34
    • 0036479008 scopus 로고    scopus 로고
    • Identification of foreign gene sequences by transcript filtering against the human genome
    • Weber G, Shendure J, Tanenbaum DM, Church GM, Meyerson M. 2002. Identification of foreign gene sequences by transcript filtering against the human genome. Nat Genet 30: 141-142.
    • (2002) Nat Genet , vol.30 , pp. 141-142
    • Weber, G.1    Shendure, J.2    Tanenbaum, D.M.3    Church, G.M.4    Meyerson, M.5
  • 35
    • 67649671961 scopus 로고    scopus 로고
    • Long noncoding RNAs: Functional surprises from the RNA world
    • Wilusz JE, Sunwoo H, Spector DL. 2009. Long noncoding RNAs: Functional surprises from the RNA world. Genes & Dev 23: 1494-1504.
    • (2009) Genes & Dev , vol.23 , pp. 1494-1504
    • Wilusz, J.E.1    Sunwoo, H.2    Spector, D.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.