The study of plant SNAREs specificity in vivo

Plant Biosystems

Volumn 143, Issue 3, 2009, Pages 621-629

  Di Sansebastiano, G P ^a   Faraco, M ^a   Zouhar, J ^b   Dalessandro, G ^a  

^a UNIVERSITY OF SALENTO   (Italy)

^b CENTRO NACIONAL DE BIOTECNOLOGÍA   (Spain)

Author keywords

Endomembranes; Secretion; SNAREs

Indexed keywords

EID: 74949130191     PISSN: 11263504     EISSN: 17245575     Source Type: Journal    
DOI: 10.1080/11263500903233342     Document Type: Article

References (83)

1. Archer DA, Graham ME, Burgoyne RD. 2002. Complexin regulates the closure of the fusion pore during regulated vesicle exocytosis. J Biol Chem 277: 18249-18252.
2. Assaad FF, Qiu JL, Youngs H, Ehrhardt D, Zimmerli L, Kalde M, et al. 2004. The PEN1 syntaxin defines a novel cellular compartment upon fungal attack and is required for the timely assembly of papillae. Mol Biol Cell 15: 5118-5129.
3. Bassham DC, Sanderfoot AA, Kovaleva V, Zheng H, Raikhel NV. 2000. AtVPS45 complex formation at the trans-Golgi network. Mol Biol Cell 11: 2251-2265.
4. Bhalla A, Chicka MC, Tucker WC, Chapman ER. 2006. Ca(2+)-synaptotagmin directly regulates t-SNARE function during reconstituted membrane fusion. Nat Struct Mol Biol 13: 323-330.
5. Bock JB, Matern HT, Peden AA, Scheller RH. 2001. A genomic perspective on membrane compartment organization. Nature 409: 839-841.
6. Borgese N, Colombo S, Pedrazzini E. 2003. The tale of tailanchored proteins: Coming from the cytosol and looking for a membrane. J Cell Biol 161: 1013-1018.
7. Bowen ME, Weninger K, Ernst J, Chu S, Brunger AT. 2005. Single-molecule studies of synaptotagmin and complexin binding to the SNARE complex. Biophys J 89: 690-702.
8. Brandizzi F, Frangne N, Marc-Martin S, Hawes C, Neuhaus JM, Paris N. 2002. The destination for single-pass membrane proteins is influenced markedly by the length of the hydrophobic domain. Plant Cell 14: 1077-1092.
9. Carter C, Pan S, Zouhar J, Avila E, Girke T, Raikhel N. 2004. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Plant Cell 16: 3285-3303.
10. Catalano CM, Czymmek KJ, Gann JG, Sherrier DJ. 2007. Medicago truncatula syntaxin SYP132 defines the symbiosome membrane and infection droplet membrane in root nodules. Planta 225: 541-550.
11. Cavalier-Smith T. 2002. The phagotrophic origin of eukaryotes and phylogenetic classification of Protozoa. Int J Syst Evol Microbiol 52: 297-354.
12. Chow CM, Neto H, Foucart C, Moore I. 2008. Rab-A2 and Rab-A3 GTPases define a trans-Golgi endosomal membrane domain in Arabidopsis that contributes substantially to the cell plate. Plant Cell 20: 101-123.
13. Collins NC, Thordal-Christensen H, Lipka V, Bau S, Kombrink E, Qiu JL, et al. 2003. SNARE-protein-mediated disease resistance at the plant cell wall. Nature 425: 973-977.
14. Dacks JB, Poon PP, Field MC. 2008. Phylogeny of endocytic components yields insight into the process of nonendosymbiotic organelle evolution. Proc Natl Acad Sci USA 105: 588-593.
15. Dettmer J, Hong-Hermesdorf A, Stierhof YD, Schumacher K. 2006. Vacuolar H+-ATPase activity is required for endocytic and secretory trafficking in Arabidopsis. Plant Cell 18: 715-730.
16. Di Sansebastiano G, Gigante M, De Domenico S, Piro G, Dalessandro G. 2006. Sorting of GFP tagged NtSyr1, an ABA related syntaxin. Plant Signal Behav 1: 76-84.
17. Di Sansebastiano G, Paris N, Marcmartin S, Neuhaus JM. 2001. Regeneration of a lytic central vacuole and of neutral peripheral vacuoles can be visualized by green fluorescent proteins targeted to either type of vacuoles. Plant Physiol 126: 78-86.
18. Di Sansebastiano G, Rehman RU, Neuhaus JM. 2007. Rat betaglucuronidase as a reporter protein for the analysis of the plant secretory pathway. Plant Biosyst 141: 329-336.
19. Fasshauer D, Sutton RB, Brunger AT, Jahn R. 1998. Conserved structural features of the synaptic fusion complex: SNARE proteins reclassified as Q- and R-SNAREs. Proc Natl Acad Sci USA 95: 15781-15786.
20. Fernández-Chacón R, Königstorfer A, Gerber SH, García J, Matos MF, Stevens CF, et al. 2001. Synaptotagmin I functions as a calcium regulator of release probability. Nature 410: 41-49.
21. Foresti O, Dasilva LL, Denecke J. 2006. Overexpression of the Arabidopsis syntaxin PEP12/SYP21 inhibits transport from the prevacuolar compartment to the lytic vacuole in vivo. Plant Cell 18: 2275-2293.
22. Garcia-Mata C, Lamattina L. 2003. Abscisic acid, nitric oxide and stomatal closure - Is nitrate reductase one of the missing links? Trends Plant Sci 8: 20-26.
23. Geelen D, Leyman B, Batoko H, Di Sansebastiano GP, Moore I, Blatt MR. 2002. The abscisic acid-related SNARE homolog NtSyr1 contributes to secretion and growth: Evidence from competition with its cytosolic domain. Plant Cell 14: 387-406.
24. Geldner N, Friml J, Stierhof YD, Jürgens G, Palme K. 2001. Auxin transport inhibitors block PIN1 cycling and vesicle trafficking. Nature 413: 425-428.
25. Giraudo CG, Eng WS, Melia TJ, Rothman JE. 2006. A clamping mechanism involved in SNARE-dependent exocytosis. Science 313: 676-680.
26. Grebe M, Xu J, Möbius W, Ueda T, Nakano A, Geuze HJ, et al. 2003. Arabidopsis sterol endocytosis involves actin-mediated trafficking via ARA6-positive early endosomes. Curr Biol 13: 1378-1387.
27. Hasegawa H, Yang Z, Oltedal L, Davanger S, Hay JC. 2004. Intramolecular protein-protein and protein-lipid interactions control the conformation and subcellular targeting of neuronal Ykt6. J Cell Sci 117: 4495-4508.
28. Heese M, Gansel X, Sticher L, Wick P, Grebe M, Granier F, et al. 2001. Functional characterization of the KNOLLE-interacting t-SNARE AtSNAP33 and its role in plant cytokinesis. J Cell Biol 155: 239-249.
29. Holdaway-Clarke TL, Weddle NM, Kim S, Robi A, Parris C, Kunkel JG, et al. 2003. Effect of extracellular calcium, pH and borate on growth oscillations in Lilium formosanum pollen tubes. J Exp Bot 54: 65-72.
30. Hong W. 2005. SNAREs and traffic. Biochim Biophys Acta 1744: 493-517.
31. Hu C, Ahmed M, Melia TJ, Söllner TH, Mayer T, Rothman JE. 2003. Fusion of cells by flipped SNAREs. Science 300: 1745-1749.
32. Jaillais Y, Fobis-Loisy I, Miege C, Gaude T. 2008. Evidence for a sorting endosome in Arabidopsis root cells. Plant J 53: 237-247.
33. Jantti J, Keranen S, Toikkanen J, Ehnholm C, Sodderlund H, Olkkonen VM. 1994. Membrane insertion and intracellular transport of yeast syntaxin Sso2p in mammalian cells. J Cell Sci 107: 3623-3633.
34. Kalde M, Nühse TS, Findlay K, Peck SC. 2007. The syntaxin SYP132 contributes to plant resistance against bacteria and secretion of pathogenesis-related protein 1. Proc Natl Acad Sci USA 104: 11850-11855.
35. Kargul J, Gansel X, Tyrrell M, Sticher L, Blatt MR. 2001. Protein-binding partners of the tobacco syntaxin NtSyr1. FEBS Lett 508: 253-258.
36. Kasai K, Akagawa K. 2001. Roles of the cytoplasmic and transmembrane domains of syntaxins in intracellular localization and trafficking. J Cell Sci 114: 3115-3124.
37. Kato T, Morita MT, Fukaki H, Yamauchi Y, Uehara M, Niihama M, et al. 2002. SGR2, a phospholipase-like protein, and ZIG/SGR4, a SNARE, are involved in the shoot gravitropism of Arabidopsis. Plant Cell 14: 33-46.
38. Kloepper TH, Kienle CN, Fasshauer D. 2007. An elaborate classification of SNARE proteins sheds light on the conservation of the eukaryotic endomembrane system. Mol Biol Cell 18: 3463-3471.
39. Klüsener B, Young JJ, Murata Y, Allen GJ, Mori IC, Hugouvieux V, et al. 2002. Convergence of calcium signaling pathways of pathogenic elicitors and abscisic acid in Arabidopsis guard cells. Plant Physiol 130: 2152-2163.
40. Kutay U, Ahnert-Hilgen G, Hartmann E, Wiedenmann B, Rapoport TA. 1995. Transport route for synaptobrevin via a novel pathway of insertion into the endoplasmic reticulum membrane. EMBO J 14: 224-231.
41. Lam SK, Tse YC, Robinson DG, Jiang L. 2007. Tracking down the elusive early endosome. Trends Plant Sci 12: 497-505.
42. 2-containing vesicles with tonoplast and increased salt tolerance. Proc Natl Acad Sci USA 103: 18008-18013.
43. Leucci MR, Di Sansebastiano GP, Gigante M, Dalessandro G, Piro G. 2007. Secretion marker proteins and cell-wall polysaccharides move through different secretory pathways. Planta 225: 1001-1017.
44. Lipka V, Kwon C, Panstruga R. 2007. SNARE-ware: The role of SNARE-domain proteins in plant biology. Annu Rev Cell Dev Biol 23: 147-174.
45. Lukowitz W, Mayer U, Jürgens G. 1996. Cytokinesis in the Arabidopsis embryo involves the syntaxin-related KNOLLE gene product. Cell 84: 61-71.
46. Marmagne A, Rouet MA, Ferro M, Rolland N, Alcon C, Joyard J, et al. 2004. Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. Mol Cell Proteomics 3: 675-691.
47. Melia Jr TJ. 2007. Putting the clamps on membrane fusion: How complexin sets the stage for calcium-mediated exocytosis. FEBS Lett 581: 2131-2139.
48. Melia TJ, Weber T, Mcnew JA, Fisher LE, Johnston RJ, Parlati F, et al. 2002. Regulation of membrane fusion by the membrane-proximal coil of the t-SNARE during zippering of SNAREpins. J Cell Biol 158: 929-940.
49. Mongrand S, Morel J, Laroche J, Claverol S, Carde JP, Hartmann MA, et al. 2004. Lipid rafts in higher plant cells: Purification and characterization of Triton X-100-insoluble microdomains from tobacco plasma membrane. J Biol Chem 279: 36277-36286.
50. Morel J, Claverol S, Mongrand S, Furt F, Fromentin J, Bessoule JJ, et al. 2006. Proteomics of plant detergent-resistant membranes. Mol Cell Proteomics 5: 1396-1411.
51. Niihama M, Uemura T, Saito C, Nakano A, Sato MH, Tasaka M, et al. 2005. Conversion of functional specificity in Qb- SNARE VTI1 homologues of Arabidopsis. Curr Biol 15: 555-560.
52. Oufattole M, Park JH, Poxleitner M, Jiang L, Rogers JC. 2005. Selective membrane protein internalization accompanies movement from the endoplasmic reticulum to the protein storage vacuole pathway in Arabidopsis. Plant Cell 17: 3066-3080.
53. Pabst S, Margittai M, Vainius D, Langen R, Jahn R, Fasshauer D. 2002. Rapid and selective binding to the synaptic SNARE complex suggests a modulatory role of complexins in neuroexocytosis. J Biol Chem 277: 7838-7848.
54. Park M, Kim SJ, Vitale A, Hwang I. 2004. Identification of the protein storage vacuole and protein targeting to the vacuole in leaf cells of three plant species. Plant Physiol 134: 625-639.
55. Pedrazzini E, Villa A, Borgese N. 1996. A mutant cytochrome b5 with a lengthened membrane anchor escapes from the endoplasmic reticulum and reaches the plasma membrane. Proc Natl Acad Sci USA 93: 4207-4212.
56. Pedrazzini E, Villa A, Longhi R, Bulbarelli A, Borgese N. 2000. Mechanism of residence of cytochrome b(5), a tailanchored protein, in the endoplasmic reticulum. J Cell Biol 148: 899-914.
57. Pratelli R, Sutter JU, Blatt MR. 2004. A new catch in the SNARE. Trends Plant Sci 9: 187-195.
58. Rehman RU, Stigliano E, Lycett GW, Sticher L, Sbano F, Faraco M, et al. 2008. Tomato Rab11a characterization evidenced a difference between SYP121-dependent and SYP122-dependent exocytosis. Plant Cell Physiol 49: 751-766.
59. Robinson DG, Jiang L, Schumacher K. 2008. The endosomal system of plants: Charting new and familiar territories. Plant Physiol 147: 1482-1492.
60. Roger AJ. 1999. Reconstructing early events in eukaryotic evolution. Am Nat 154: 146-163.
61. Rojo E, Gillmor CS, Kovaleva V, Somerville CR, Raikhel NV. 2001. VACUOLELESS1 is an essential gene required for vacuole formation and morphogenesis in Arabidopsis. Dev Cell 1: 303-310.
62. Rutherford S, Moore I. 2002. The Arabidopsis Rab GTPase family: Another enigma variation. Curr Opin Plant Biol 5: 518-528.
63. Sanderfoot A. 2007. Increases in the number of SNARE genes parallels the rise of multicellularity among the green plants. Plant Physiol 144: 6-17.
64. Sanderfoot AA, Assaad FF, Raikhel NV. 2000. The Arabidopsis genome: An abundance of soluble N-ethylmaleimidesensitive factor adaptor protein receptors. Plant Physiol 124: 1558-1569.
65. Sanderfoot AA, Pilgrim M, Adam L, Raikhel NV. 2001. Disruption of individual members of Arabidopsis syntaxin gene families indicates each has essential functions. Plant Cell 13: 659-666.
66. Sanmartín M, Ordóñez A, Sohn EJ, Robert S, Sánchez-Serrano JJ, Surpin MA, et al. 2007. Divergent functions of VTI12 and VTI11 in trafficking to storage and lytic vacuoles in Arabidopsis. Proc Natl Acad Sci USA 104: 3645-3650.
67. Sato MH, Nakamura N, Ohsumi Y, Kouchi H, Kondo M, Hara-Nishimura I, et al. 1997. The AtVAM3 encodes a syntaxin- related molecule implicated in the vacuolar assembly in Arabidopsis thaliana. J Biol Chem 272: 24530-24535.
68. Schaub JR, Lu X, Doneske B, Shin YK, Mcnew JA. 2006. Hemifusion arrest by complexin is relieved by Ca2+-synap- totagmin I. Nat Struct Mol Biol 13: 748-750.
69. Short B, Haas A, Barr FA. 2005. Golgins and GTPases, giving identity and structure to the Golgi apparatus. Biochim Biophys Acta 744: 383-395.
70. 2+ release and ion channel control by nitric oxide and abscisic acid in guard cells. Plant J 43: 520-529.
71. Surpin M, Zheng H, Morita MT, Saito C, Avila E, Blakeslee JJ, et al. 2003. The VTI family of SNARE proteins is necessary for plant viability and mediates different protein transport pathways. Plant Cell 15: 2885-2899.
72. Tokumaru H, Umayahara K, Pellegrini LL, Ishizuka T, Saisu H, Betz H, et al. 2001. SNARE complex oligomerization by synaphin/complexin is essential for synaptic vesicle exocytosis. Cell 104: 421-432.
73. Tse YC, Mo BX, Hillmer S, Zhao M, Lo SW, Robinson DG, et al. 2004. Identification of multivesicular bodies as prevacu- olar compartments in Nicotiana tabacum BY-2 cells. Plant Cell 16: 672-693.
74. Tyrrell M, Campanoni P, Sutter JU, Pratelli R, Paneque M, Sokolovski S, et al. 2007. Selective targeting of plasma membrane and tonoplast traffic by inhibitory (dominant-negative) SNARE fragments. Plant J 51: 1099-1115.
75. Uemura T, Ueda T, Ohniwa RL, Nakano A, Takeyasu K, Sato MH. 2004. Systematic analysis of SNARE molecules in Arabidopsis: Dissection of the post-Golgi network in plant cells. Cell Struct Funct 29: 49-65.
76. Varlamov O, Volchuk A, Rahimian V, Doege CA, Paumet F, Eng WS, et al. 2004. i-SNAREs: Inhibitory SNAREs that fine-tune the specificity of membrane fusion. J Cell Biol 164: 79-88.
77. Weber T, Zemelman BV, Mcnew JA, Westermann B, Gmachl M, Parlati F, et al. 1998. SNAREpins: Minimal machinery for membrane fusion. Cell 92: 759-772.
78. Wee EG, Sherrier DJ, Prime TA, Dupree P. 1998. Targeting of active sialyltransferase to the plant Golgi apparatus. Plant Cell 10: 1759-1768.
79. Yano D, Sato M, Saito C, Sato MH, Morita MT, Tasaka M. 2003. A SNARE complex containing SGR3/AtVAM3 and ZIG/VTI11 in gravity-sensing cells is important for Arabidopsis shoot gravitropism. Proc Natl Acad Sci USA 100: 8589-8594.
80. Zhang Z, Feechan A, Pedersen C, Newman MA, Qiu JL, Olesen KL, et al. 2007. A SNARE-protein has opposing functions in penetration resistance and defence signalling pathways. Plant J 49: 302-312.
81. Zheng H, Bednarek SY, Sanderfoot AA, Alonso J, Ecker JR, Raikhel NV. 2002. NPSN11 is a cell plate-associated SNARE protein that interacts with the syntaxin KNOLLE. Plant Physiol 129: 530-539.
82. Zheng H, Von Mollard GF, Kovaleva V, Stevens TH, Raikhel NV. 1999. The plant vesicle-associated SNARE AtVTI1a likely mediates vesicle transport from the trans-Golgi network to the prevacuolar compartment. Mol Biol Cell 10: 2251-2264.
83. Zhu J, Gong Z, Zhang C, Song CP, Damsz B, Inan G, et al. 2002. OSM1/SYP61: A syntaxin protein in Arabidopsis controls abscisic acid-mediated and nonabscisic acid-mediated responses to abiotic stress. Plant Cell 14: 3009-3028.