-
1
-
-
0035942271
-
Significance analysis of microarrays applied to transcriptional responses to ionizing radiation
-
Tusher VG, Tibshirani R, Chu G. Significance analysis of microarrays applied to transcriptional responses to ionizing radiation. Proceedings of the National Academy of Sciences 2001, 98:5116-5121.
-
(2001)
Proceedings of the National Academy of Sciences
, vol.98
, pp. 5116-5121
-
-
Tusher, V.G.1
Tibshirani, R.2
Chu, G.3
-
2
-
-
0142179210
-
Local-pooled-error test for identifying differentially expressed genes with a small number of replicated microarrays
-
10.1093/bioinformatics/btg264, 14555628
-
Jain N, Thatte J, Braciale T, Ley K, O'Connell M, Lee JK. Local-pooled-error test for identifying differentially expressed genes with a small number of replicated microarrays. Bioinformatics 2003, 19(15):1945-1951. 10.1093/bioinformatics/btg264, 14555628.
-
(2003)
Bioinformatics
, vol.19
, Issue.15
, pp. 1945-1951
-
-
Jain, N.1
Thatte, J.2
Braciale, T.3
Ley, K.4
O'Connell, M.5
Lee, J.K.6
-
3
-
-
0034948896
-
A Bayesian framework for the analysis of microarray expression data: regularized t-test and statistical inference of gene changes
-
10.1093/bioinformatics/17.6.509, 11395427
-
Baldi P, Long AD. A Bayesian framework for the analysis of microarray expression data: regularized t-test and statistical inference of gene changes. Bioinformatics 2001, 17:509-519. 10.1093/bioinformatics/17.6.509, 11395427.
-
(2001)
Bioinformatics
, vol.17
, pp. 509-519
-
-
Baldi, P.1
Long, A.D.2
-
5
-
-
33947304753
-
Microarray analysis distinguishes differential gene expression patterns from large and small colony Thymidine kinase mutants of L5178Y mouse lymphoma cells
-
10.1186/1471-2105-7-S2-S9, 1683564, 17118152
-
Han T, Wang J, Tong W, Moore MM, Fuscoe JC, Chen T. Microarray analysis distinguishes differential gene expression patterns from large and small colony Thymidine kinase mutants of L5178Y mouse lymphoma cells. BMC Bioinformatics 2006, 7(Suppl 2):S9. 10.1186/1471-2105-7-S2-S9, 1683564, 17118152.
-
(2006)
BMC Bioinformatics
, vol.7
, Issue.SUPPL. 2
-
-
Han, T.1
Wang, J.2
Tong, W.3
Moore, M.M.4
Fuscoe, J.C.5
Chen, T.6
-
6
-
-
20744435933
-
Gene expression in giant cell myocarditis: Altered expression of immune response genes
-
10.1016/j.ijcard.2005.03.075, 15982506
-
Kittleson MM, Minhas KM, Irizarry RA, Ye SQ, Edness G, Breton E, Conte JV, Tomaselli G, Garcia JGN, Hare JM. Gene expression in giant cell myocarditis: Altered expression of immune response genes. International Journal of Cardiology 2005, 102(2):333-340. 10.1016/j.ijcard.2005.03.075, 15982506.
-
(2005)
International Journal of Cardiology
, vol.102
, Issue.2
, pp. 333-340
-
-
Kittleson, M.M.1
Minhas, K.M.2
Irizarry, R.A.3
Ye, S.Q.4
Edness, G.5
Breton, E.6
Conte, J.V.7
Tomaselli, G.8
Garcia, J.G.N.9
Hare, J.M.10
-
7
-
-
33645818727
-
Serum circulating human mRNA profiling and its utility for oral cancer detection
-
10.1200/JCO.2005.03.7598, 16505414
-
Li Y, Elashoff D, Oh M, Sinha U, St John MAR, Zhou X, Abemayor E, Wong DT. Serum circulating human mRNA profiling and its utility for oral cancer detection. Journal of Clinical Oncology 2006, 24(11):1754-1760. 10.1200/JCO.2005.03.7598, 16505414.
-
(2006)
Journal of Clinical Oncology
, vol.24
, Issue.11
, pp. 1754-1760
-
-
Li, Y.1
Elashoff, D.2
Oh, M.3
Sinha, U.4
St John, M.A.R.5
Zhou, X.6
Abemayor, E.7
Wong, D.T.8
-
8
-
-
33746411329
-
CDNA microarrays as a tool for identification of biomineralization proteins in the coccolithophorid Emiliania hux-leyi (Haptophyta)
-
10.1128/AEM.00343-06, 1538752, 16885305
-
Quinn P, Bowers RM, Zhang X, Wahlund TM, Fanelli MA, Olszova D, Read BA. cDNA microarrays as a tool for identification of biomineralization proteins in the coccolithophorid Emiliania hux-leyi (Haptophyta). Applied and Environmental Microbiology 2006, 72(8):5512-5526. 10.1128/AEM.00343-06, 1538752, 16885305.
-
(2006)
Applied and Environmental Microbiology
, vol.72
, Issue.8
, pp. 5512-5526
-
-
Quinn, P.1
Bowers, R.M.2
Zhang, X.3
Wahlund, T.M.4
Fanelli, M.A.5
Olszova, D.6
Read, B.A.7
-
9
-
-
33646235623
-
Proteomic analysis of shoot-borne root initiation in maize (Zea mays L.)
-
10.1002/pmic.200500564, 16521151
-
Sauer M, Jakob A, Nordheim A, Hochholdinger F. Proteomic analysis of shoot-borne root initiation in maize (Zea mays L.). Proteomics 2006, 6(8):2530-2541. 10.1002/pmic.200500564, 16521151.
-
(2006)
Proteomics
, vol.6
, Issue.8
, pp. 2530-2541
-
-
Sauer, M.1
Jakob, A.2
Nordheim, A.3
Hochholdinger, F.4
-
10
-
-
60849125094
-
Bayesian optimal discovery procedure for simultaneous significance testing
-
10.1186/1471-2105-10-5, 2628883, 19126217
-
Cao J, Xie X, Zhang S, Whitehurst A, White M. Bayesian optimal discovery procedure for simultaneous significance testing. BMC Bioinformatics 2009, 10:5. 10.1186/1471-2105-10-5, 2628883, 19126217.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 5
-
-
Cao, J.1
Xie, X.2
Zhang, S.3
Whitehurst, A.4
White, M.5
-
11
-
-
24144445705
-
Improved statistical tests for differential gene expression by shrinking variance components estimates
-
10.1093/biostatistics/kxh018, 15618528
-
Cui X, Hwang JTG, Qiu J, Blades NJ, Churchill GA. Improved statistical tests for differential gene expression by shrinking variance components estimates. Biostatistics 2005, 6:59-75. 10.1093/biostatistics/kxh018, 15618528.
-
(2005)
Biostatistics
, vol.6
, pp. 59-75
-
-
Cui, X.1
Hwang, J.T.G.2
Qiu, J.3
Blades, N.J.4
Churchill, G.A.5
-
14
-
-
0035931947
-
Gene-expression profiles in hereditary breast cancer
-
Hedenfalk I, Duggan D, Chen Y, Radmacher M, Bittner M, Simon R, Meltzer P, Gusterson B, Esteller M, Kallioniemi O, Wilfond B, Borg A, Trent J. Gene-expression profiles in hereditary breast cancer. New England Journal of Medicine 2002, 344(8):539-548.
-
(2002)
New England Journal of Medicine
, vol.344
, Issue.8
, pp. 539-548
-
-
Hedenfalk, I.1
Duggan, D.2
Chen, Y.3
Radmacher, M.4
Bittner, M.5
Simon, R.6
Meltzer, P.7
Gusterson, B.8
Esteller, M.9
Kallioniemi, O.10
Wilfond, B.11
Borg, A.12
Trent, J.13
-
16
-
-
22144461265
-
Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset
-
10.1186/gb-2005-6-2-r16, 551536, 15693945
-
Choe SE, Boutros M, Michelson AM, Church GM, Halfon MS. Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset. Genome Biology 2005, 6(2):R16. 10.1186/gb-2005-6-2-r16, 551536, 15693945.
-
(2005)
Genome Biology
, vol.6
, Issue.2
-
-
Choe, S.E.1
Boutros, M.2
Michelson, A.M.3
Church, G.M.4
Halfon, M.S.5
-
17
-
-
33845562634
-
Feature-level exploration of a published Affymetrix GeneChip control dataset
-
10.1186/gb-2006-7-8-404, 1779590, 16953902
-
Irizarry RA, Cope LM, Wu Z. Feature-level exploration of a published Affymetrix GeneChip control dataset. Genome Biology 2006, 7(8):404. 10.1186/gb-2006-7-8-404, 1779590, 16953902.
-
(2006)
Genome Biology
, vol.7
, Issue.8
, pp. 404
-
-
Irizarry, R.A.1
Cope, L.M.2
Wu, Z.3
-
19
-
-
4444235995
-
Detecting differential gene expression with a semiparametric hierarchical mixture method
-
Newton MA, Noueiry A, Sarkar D, Ahlquist P. Detecting differential gene expression with a semiparametric hierarchical mixture method. Biostatistics 2004, 4:155-176.
-
(2004)
Biostatistics
, vol.4
, pp. 155-176
-
-
Newton, M.A.1
Noueiry, A.2
Sarkar, D.3
Ahlquist, P.4
-
20
-
-
34147123145
-
The optimal discovery procedure for large-scale significance testing, with applications to comparative microarray experiments
-
10.1093/biostatistics/kxl019, 16928955
-
Storey JD, Dai JY, Leek JT. The optimal discovery procedure for large-scale significance testing, with applications to comparative microarray experiments. Biostatistics 2007, 8:414-432. 10.1093/biostatistics/kxl019, 16928955.
-
(2007)
Biostatistics
, vol.8
, pp. 414-432
-
-
Storey, J.D.1
Dai, J.Y.2
Leek, J.T.3
-
21
-
-
84888282432
-
Measuring statistical significance for full Bayesian methods in microarray analysis
-
Cao J, Zhang S. Measuring statistical significance for full Bayesian methods in microarray analysis. Technical report , http://smu.edu/statistics/TechReports/tech-rpts.asp
-
Technical report
-
-
Cao, J.1
Zhang, S.2
|