-
1
-
-
0027197725
-
General initiation factors for RNA polymerase II
-
Conaway RC, Conaway JW (1993) General initiation factors for RNA polymerase II. Annu Rev Biochem 62:161-190.
-
(1993)
Annu Rev Biochem
, vol.62
, pp. 161-190
-
-
Conaway, R.C.1
Conaway, J.W.2
-
2
-
-
33644852483
-
Mediator as a general transcription factor
-
Takagi Y, Kornberg RD (2006) Mediator as a general transcription factor. J Biol Chem 281:80-89.
-
(2006)
J Biol Chem
, vol.281
, pp. 80-89
-
-
Takagi, Y.1
Kornberg, R.D.2
-
3
-
-
18844427874
-
The yeast Mediator complex and its regulation
-
Bjö rklund S, Gustafsson CM (2005) The yeast Mediator complex and its regulation. Trends Biochem Sci 30:240-244.
-
(2005)
Trends Biochem Sci
, vol.30
, pp. 240-244
-
-
Bjö rklund, S.1
Gustafsson, C.M.2
-
4
-
-
18844451820
-
Mediator and the mechanism of transcriptional activation
-
Kornberg RD (2005) Mediator and the mechanism of transcriptional activation, Trends Biochem Sci 30:235-239.
-
(2005)
Trends Biochem Sci
, vol.30
, pp. 235-239
-
-
Kornberg, R.D.1
-
5
-
-
18844378166
-
The mammalian Mediator complex and its role in transcriptional regulation
-
ConawayJW
-
Conaway RC, Sato S, Tomomori-Sato C, Yao T, ConawayJW(2005) The mammalian Mediator complex and its role in transcriptional regulation. Trends Biochem Sci 30:250-255.
-
(2005)
Trends Biochem Sci
, vol.30
, pp. 250-255
-
-
Conaway, R.C.1
Sato, S.2
Tomomori-Sato, C.3
Yao, T.4
-
6
-
-
0029758906
-
Ligand induction of a transcriptionally active thyroid hormone receptor coactivator complex
-
Fondell JD, Ge H, Roeder RG (1996) Ligand induction of a transcriptionally active thyroid hormone receptor coactivator complex. Proc Natl Acad Sci USA 93:8329-8333.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 8329-8333
-
-
Fondell, J.D.1
Ge, H.2
Roeder, R.G.3
-
7
-
-
0029867265
-
A mammalian SRB protein associated with an RNA polymerase II holoenzyme
-
Chao DM, et al. (1996) A mammalian SRB protein associated with an RNA polymerase II holoenzyme. Nature 380:82-85.
-
(1996)
Nature
, vol.380
, pp. 82-85
-
-
Chao, D.M.1
-
8
-
-
0037178813
-
Novel Mediator proteins of the small Mediator complex in Drosophila SL2 cells
-
Gu JY, et al. (2002) Novel Mediator proteins of the small Mediator complex in Drosophila SL2 cells. J Biol Chem 277:27154-27161.
-
(2002)
J Biol Chem
, vol.277
, pp. 27154-27161
-
-
Gu, J.Y.1
-
9
-
-
0004788326
-
Mammalian mediator of transcriptional regulation and its possible role as an end-point of signal transduction pathways
-
Jiang YW, et al. (1998) Mammalian mediator of transcriptional regulation and its possible role as an end-point of signal transduction pathways. Proc Natl Acad Sci USA 95:8538-8543.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 8538-8543
-
-
Jiang, Y.W.1
-
10
-
-
0342817958
-
Caenorhabditis elegans mediator complexes are required for developmental-specific transcriptional activation
-
Kwon JY, et al. (1999) Caenorhabditis elegans mediator complexes are required for developmental-specific transcriptional activation. Proc Natl Acad Sci USA 96:14990-14995.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 14990-14995
-
-
Kwon, J.Y.1
-
11
-
-
0343851603
-
Purification and characterization of RNA polymerase II holoenzyme from Schizosaccharomyces pombe
-
Spåhr H, et al. (2000) Purification and characterization of RNA polymerase II holoenzyme from Schizosaccharomyces pombe. J Biol Chem 275:1351-1356.
-
(2000)
J Biol Chem
, vol.275
, pp. 1351-1356
-
-
Spåhr, H.1
-
12
-
-
34249826038
-
Purification of a plant mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit
-
Bä ckström S, Elfving N, Nilsson R, Wingsle G, Bjö rklund S (2007) Purification of a plant mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit. Mol Cell 26:717-729.
-
(2007)
Mol Cell
, vol.26
, pp. 717-729
-
-
Bä ckström, S.1
Elfving, N.2
Nilsson, R.3
Wingsle, G.4
Bjö rklund, S.5
-
13
-
-
0028282551
-
A multiprotein mediator of transcriptional activation and its interaction with the C-terminal repeat domain ofRNA polymerase II
-
Kim YJ, Bjö rklund S, Li Y, Sayre MH, Kornberg RD (1994) A multiprotein mediator of transcriptional activation and its interaction with the C-terminal repeat domain ofRNA polymerase II. Cell 77:599-608.
-
(1994)
Cell
, vol.77
, pp. 599-608
-
-
Kim, Y.J.1
Bjö rklund, S.2
Li, Y.3
Sayre, M.H.4
Kornberg, R.D.5
-
14
-
-
0038832859
-
Conserved structures of mediator and RNA polymerase II holoenzyme
-
Asturias FJ, Jiang YW, Myers LC, Gustafsson CM, Kornberg RD (1999) Conserved structures of mediator and RNA polymerase II holoenzyme. Science 283:985-987.
-
(1999)
Science
, vol.283
, pp. 985-987
-
-
Asturias, F.J.1
Jiang, Y.W.2
Myers, L.C.3
Gustafsson, C.M.4
Kornberg, R.D.5
-
15
-
-
0028826925
-
Yeast global transcriptional regulators Sin4 and Rgr1 are components of mediator complex/RNA polymerase II holoenzyme
-
Li Y, et al. (1995) Yeast global transcriptional regulators Sin4 and Rgr1 are components of mediator complex/RNA polymerase II holoenzyme. Proc Natl Acad Sci USA 92:10864-10868.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 10864-10868
-
-
Li, Y.1
-
16
-
-
14344283020
-
Structural organization of yeast and mammalian mediator complexes
-
Dotson MR, et al. (2000) Structural organization of yeast and mammalian mediator complexes. Proc Natl Acad Sci USA 97:14307-14310.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 14307-14310
-
-
Dotson, M.R.1
-
17
-
-
6044249068
-
A high resolution protein interaction map of the yeast Mediator complex
-
Guglielmi B, et al. (2004) A high resolution protein interaction map of the yeast Mediator complex. Nucleic Acids Res 32:5379-5391.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 5379-5391
-
-
Guglielmi, B.1
-
18
-
-
0000496457
-
Requirement for a functional interaction between mediator components Med6 and Srb4 in RNA polymerase II transcription
-
Lee YC, Kim YJ (1998) Requirement for a functional interaction between mediator components Med6 and Srb4 in RNA polymerase II transcription. Mol Cell Biol 18:5364-5370.
-
(1998)
Mol Cell Biol
, vol.18
, pp. 5364-5370
-
-
Lee, Y.C.1
Kim, Y.J.2
-
19
-
-
0024354605
-
Intragenic and extragenic suppressors of mutations in the heptapeptide repeat domain of Saccharomyces cerevisiae RNA polymerase II
-
Nonet ML, Young RA (1989) Intragenic and extragenic suppressors of mutations in the heptapeptide repeat domain of Saccharomyces cerevisiae RNA polymerase II. Genetics 123:715-724.
-
(1989)
Genetics
, vol.123
, pp. 715-724
-
-
Nonet, M.L.1
Young, R.A.2
-
20
-
-
33746408090
-
Head module control of mediator interactions
-
Takagi Y, et al. (2006) Head module control of mediator interactions. Mol Cell 23:355-364.
-
(2006)
Mol Cell
, vol.23
, pp. 355-364
-
-
Takagi, Y.1
-
21
-
-
21944438071
-
Structure of the mediator subunit cyclin C and its implications for CDK8 function
-
Hoeppner S, Baumli S, Cramer P (2005) Structure of the mediator subunit cyclin C and its implications for CDK8 function. J Mol Biol 350:833-842.
-
(2005)
J Mol Biol
, vol.350
, pp. 833-842
-
-
Hoeppner, S.1
Baumli, S.2
Cramer, P.3
-
22
-
-
58149351376
-
Identification, structure, and functional requirement of the Mediator submodule Med7N/31
-
Koschubs T, et al. (2009) Identification, structure, and functional requirement of the Mediator submodule Med7N/31. EMBO J 28:69-80.
-
(2009)
EMBO J
, vol.28
, pp. 69-80
-
-
Koschubs, T.1
-
23
-
-
41649112169
-
Structure-system correlation identifies a gene regulatory Mediator submodule
-
Lariviè re L, et al. (2008) Structure-system correlation identifies a gene regulatory Mediator submodule. Genes Dev 22:872-877.
-
(2008)
Genes Dev
, vol.22
, pp. 872-877
-
-
Lariviè re, L.1
-
24
-
-
24044470632
-
A conserved mediator hinge revealed in the structure of the MED7.MED21 (Med7.Srb7) heterodimer
-
Baumli S, Hoeppner S, Cramer P (2005) A conserved mediator hinge revealed in the structure of the MED7.MED21 (Med7.Srb7) heterodimer. J Biol Chem 280:18171-18178.
-
(2005)
J Biol Chem
, vol.280
, pp. 18171-18178
-
-
Baumli, S.1
Hoeppner, S.2
Cramer, P.3
-
25
-
-
33749514827
-
Structure and TBP binding of the Mediator head subcomplex Med8-Med18-Med20
-
Larivière L, et al. (2006) Structure and TBP binding of the Mediator head subcomplex Med8-Med18-Med20. Nat Struct Mol Biol 13:895-901.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 895-901
-
-
Larivière, L.1
-
26
-
-
0031815749
-
How do small single-domain proteins fold?
-
Jackson SE (1998) How do small single-domain proteins fold? Fold Des 3:R81-R91.
-
(1998)
Fold Des
, vol.3
-
-
Jackson, S.E.1
-
27
-
-
0000820095
-
Thermodynamics of protein folding
-
Privalov P (1997) Thermodynamics of protein folding. J Chem Thermodyn 29:447-474.
-
(1997)
J Chem Thermodyn
, vol.29
, pp. 447-474
-
-
Privalov, P.1
-
29
-
-
0034581324
-
Folding and association of oligomeric and multimeric proteins
-
Jaenicke R, Lilie H (2000) Folding and association of oligomeric and multimeric proteins. Adv Protein Chem 53:329-401.
-
(2000)
Adv Protein Chem
, vol.53
, pp. 329-401
-
-
Jaenicke, R.1
Lilie, H.2
-
30
-
-
0032906377
-
-
MateuMG,Sanchez Del PinoMM,FershtAR(1999) Mechanism of folding and assembly of a small tetrameric protein domain from tumor suppressor p53. Nat Struct Biol 6:191-198.
-
MateuMG,Sanchez Del PinoMM,FershtAR(1999) Mechanism of folding and assembly of a small tetrameric protein domain from tumor suppressor p53. Nat Struct Biol 6:191-198.
-
-
-
-
31
-
-
0034681907
-
Unfolding and disassembly of the chaperonin GroEL occurs via a tetradecameric intermediate with a folded equatorial domain
-
Chen J, Smith DL (2000) Unfolding and disassembly of the chaperonin GroEL occurs via a tetradecameric intermediate with a folded equatorial domain. Biochemistry 39:4250-4258.
-
(2000)
Biochemistry
, vol.39
, pp. 4250-4258
-
-
Chen, J.1
Smith, D.L.2
-
32
-
-
33749263567
-
Kinetic folding and assembly mechanisms differ for two homologous heptamers
-
Luke K, Perham M, Wittung-Stafshede P (2006) Kinetic folding and assembly mechanisms differ for two homologous heptamers. J Mol Biol 363:729-742.
-
(2006)
J Mol Biol
, vol.363
, pp. 729-742
-
-
Luke, K.1
Perham, M.2
Wittung-Stafshede, P.3
-
33
-
-
58149163281
-
-
Tó th-Petró czy A, et al. (2008) Malleable machines in transcription regulation: The mediator complex. PLoS Comput Biol 4:e1000243.
-
Tó th-Petró czy A, et al. (2008) Malleable machines in transcription regulation: The mediator complex. PLoS Comput Biol 4:e1000243.
-
-
-
-
34
-
-
0025301439
-
Protein secondary structure and circular dichroism: A practical guide
-
Johnson WC, Jr (1990) Protein secondary structure and circular dichroism: A practical guide. Proteins 7:205-214.
-
(1990)
Proteins
, vol.7
, pp. 205-214
-
-
Johnson Jr, W.C.1
-
35
-
-
0037686252
-
The present view of the mechanism of protein folding
-
Daggett V, Fersht A (2003) The present view of the mechanism of protein folding. Nat Rev Mol Cell Biol 4:497-502.
-
(2003)
Nat Rev Mol Cell Biol
, vol.4
, pp. 497-502
-
-
Daggett, V.1
Fersht, A.2
-
36
-
-
0027313673
-
Pathways of protein folding
-
Matthews CR (1993) Pathways of protein folding. Annu Rev Biochem 62:653-683.
-
(1993)
Annu Rev Biochem
, vol.62
, pp. 653-683
-
-
Matthews, C.R.1
-
37
-
-
60749134015
-
Assembly of ribosomes and spliceosomes: Complex ribonucleoprotein machines
-
Staley JP, Woolford JL, Jr (2009) Assembly of ribosomes and spliceosomes: Complex ribonucleoprotein machines. Curr Opin Cell Biol 21:109-118.
-
(2009)
Curr Opin Cell Biol
, vol.21
, pp. 109-118
-
-
Staley, J.P.1
Woolford Jr, J.L.2
-
38
-
-
0037321039
-
After the ribosome structures: How are the subunits assembled?
-
Williamsson JR (2003) After the ribosome structures: How are the subunits assembled? RNA 9:165-167.
-
(2003)
RNA
, vol.9
, pp. 165-167
-
-
Williamsson, J.R.1
-
39
-
-
0016221697
-
Chromatin structure: A repeating unit of histones and DNA
-
Kornberg RD (1974) Chromatin structure: A repeating unit of histones and DNA. Science 184:868-871.
-
(1974)
Science
, vol.184
, pp. 868-871
-
-
Kornberg, R.D.1
-
40
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 A resolution
-
Luger K, Mader AW, Richmond RK, Sargent DF, Richmond TJ (1997) Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature 389:251-260.
-
(1997)
Nature
, vol.389
, pp. 251-260
-
-
Luger, K.1
Mader, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
41
-
-
0022457421
-
Structure of replicating simian virus 40 minichromosomes. The replication fork, core histone segregation and terminal structures
-
Sogo JM, Stahl H, Koller T, Knippers R (1986) Structure of replicating simian virus 40 minichromosomes. The replication fork, core histone segregation and terminal structures. J Mol Biol 189:189-204.
-
(1986)
J Mol Biol
, vol.189
, pp. 189-204
-
-
Sogo, J.M.1
Stahl, H.2
Koller, T.3
Knippers, R.4
-
42
-
-
33750477650
-
Structural basis for the histone chaperone activity of Asf1
-
English CM, Adkins MW, Carson JJ, Churchill ME, Tyler JK (2006) Structural basis for the histone chaperone activity of Asf1. Cell 127:495-508.
-
(2006)
Cell
, vol.127
, pp. 495-508
-
-
English, C.M.1
Adkins, M.W.2
Carson, J.J.3
Churchill, M.E.4
Tyler, J.K.5
-
43
-
-
0025837183
-
The nucleosomal core histone octamer at 3.1 Å resolution: A tripartite protein assembly and a left-handed superhelix
-
Arents G, Burlingame RW, Wang BC, Love WE, Moudrianakis EN (1991) The nucleosomal core histone octamer at 3.1 Å resolution: A tripartite protein assembly and a left-handed superhelix. Proc Natl Acad Sci USA 88:10148-10152.
-
(1991)
Proc Natl Acad Sci USA
, vol.88
, pp. 10148-10152
-
-
Arents, G.1
Burlingame, R.W.2
Wang, B.C.3
Love, W.E.4
Moudrianakis, E.N.5
-
44
-
-
0029869460
-
Structural similarity between TAFs and the heterotetrameric core of the histone octamer
-
Xie X, et al. (1996) Structural similarity between TAFs and the heterotetrameric core of the histone octamer. Nature 380:316-322.
-
(1996)
Nature
, vol.380
, pp. 316-322
-
-
Xie, X.1
-
45
-
-
0032563164
-
Human TAFII28 and TAFII18 interact through a histone fold encoded by atypical evolutionary conserved motifs also found in the SPT3 family
-
Birck C, et al. (1998) Human TAFII28 and TAFII18 interact through a histone fold encoded by atypical evolutionary conserved motifs also found in the SPT3 family. Cell 94:239-249.
-
(1998)
Cell
, vol.94
, pp. 239-249
-
-
Birck, C.1
-
46
-
-
0035135515
-
Histone folds mediate selective heterodimerization of yeast TAFII25 with TFIID components yTAFII47 and yTAFII65 and with SAGA component ySPT7
-
Gangloff Y-G, et al. (2001) Histone folds mediate selective heterodimerization of yeast TAFII25 with TFIID components yTAFII47 and yTAFII65 and with SAGA component ySPT7. Mol Cell Biol 21:1841-1853.
-
(2001)
Mol Cell Biol
, vol.21
, pp. 1841-1853
-
-
Gangloff, Y.-G.1
-
47
-
-
0035895435
-
Dissecting the interaction network of multiprotein complexes by pairwise coexpression of subunits in E. coli
-
Fribourg S, et al. (2001) Dissecting the interaction network of multiprotein complexes by pairwise coexpression of subunits in E. coli. J Mol Biol 306:363-373.
-
(2001)
J Mol Biol
, vol.306
, pp. 363-373
-
-
Fribourg, S.1
-
48
-
-
0034672325
-
Estimation of protein secondary structure from circular dichroism spectra: Comparison of CONTIN, SELCON, and CDSSTR methods with an expanded reference set
-
Sreerama N,WoodyRW(2000) Estimation of protein secondary structure from circular dichroism spectra: Comparison of CONTIN, SELCON, and CDSSTR methods with an expanded reference set. Anal Biochem 287:252-260.
-
(2000)
Anal Biochem
, vol.287
, pp. 252-260
-
-
Sreerama, N.1
Woody, R.W.2
-
49
-
-
45849096536
-
Protein secondary structure analyses from circular dichroism spectroscopy: Methods and reference databases
-
Whitmore L, Wallace BA (2008) Protein secondary structure analyses from circular dichroism spectroscopy: Methods and reference databases. Biopolymers 89:392-400.
-
(2008)
Biopolymers
, vol.89
, pp. 392-400
-
-
Whitmore, L.1
Wallace, B.A.2
|