Identification and characterisation of the developmental expression pattern of tbx5b, a novel tbx5 gene in zebrafish

Gene Expression Patterns

Volumn 10, Issue 1, 2010, Pages 24-30

  Albalat, Ricard ^b   Baquero, Mireia ^a   Minguillón, Carolina ^a  

^a INSTITUT DE BIOLOGIA MOLECULAR DE BARCELONA   (Spain)

^b UNIVERSITY OF BARCELONA   (Spain)

Author keywords

Eye development; Gene duplication; Heart development; Pectoral fin development; T box; tbx5; Teleost; Zebrafish

Indexed keywords

TRANSCRIPTION FACTOR TBX5; TRANSCRIPTION FACTOR TBX5B; UNCLASSIFIED DRUG;

ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; DEVELOPMENTAL STAGE; EMBRYO; EMBRYO DEVELOPMENT; EYE DEVELOPMENT; GENE DUPLICATION; GENE EXPRESSION PROFILING; GENOMICS; HEART DEVELOPMENT; LIMB DEVELOPMENT; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; TISSUE DIFFERENTIATION; TISSUE DISTRIBUTION; ZEBRA FISH;

ANIMALS; COMPUTATIONAL BIOLOGY; EVOLUTION, MOLECULAR; EYE; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENES, DUPLICATE; IN SITU HYBRIDIZATION; LIKELIHOOD FUNCTIONS; MODELS, GENETIC; MYOCARDIUM; PHYLOGENY; SYNTENY; T-BOX DOMAIN PROTEINS; ZEBRAFISH;

DANIO RERIO; TELEOSTEI; TETRAPODA; VERTEBRATA;

EID: 73749088451     PISSN: 1567133X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gep.2009.11.003     Document Type: Article

References (21)

1. Agarwal P., Wylie J.N., Galceran J., Arkhitko O., Li C., Deng C., Grosschedl R., and Bruneau B.G. Tbx5 is essential for forelimb bud initiation following patterning of the limb field in the mouse embryo. Development 130 (2003) 623-633
2. Agulnik S.I., Garvey N., Hancock S., Ruvinsky I., Chapman D.L., Agulnik I., Bollag R., Papaioannou V., and Silver L.M. Evolution of mouse T-box genes by tandem duplication and cluster dispersion. Genetics 144 (1996) 249-254
3. Ahn D.G., Kourakis M.J., Rohde L.A., Silver L.M., and Ho R.K. T-box gene tbx5 is essential for formation of the pectoral limb bud. Nature 417 (2002) 754-758
4. Amores A., Force A., Yan Y.L., Joly L., Amemiya C., Fritz A., Ho R.K., Langeland J., Prince V., Wang Y.L., Westerfield M., Ekker M., and Postlethwait J.H. Zebrafish hox clusters and vertebrate genome evolution. Science 282 (1998) 1711-1714
5. Begemann G., and Ingham P.W. Developmental regulation of Tbx5 in zebrafish embryogenesis. Mech. Dev. 90 (2000) 299-304
6. Cañestro C., Catchen J.M., Rodriguez-Mari A., Yokoi H., and Postlethwait J.H. Consequences of lineage-specific gene loss on functional evolution of surviving paralogs: ALDH1A and retinoic acid signaling in vertebrate genomes. PLoS Genet. 5 (2009) e1000496
7. Catchen J.M., Conery J.S., and Postlethwait J.H. Automated identification of conserved synteny after whole-genome duplication. Genome Res. 19 (2009) 1497-1505
8. Fares M.A., Byrne K.P., and Wolfe K.H. Rate asymmetry after genome duplication causes substantial long-branch attraction artifacts in the phylogeny of Saccharomyces species. Mol. Biol. Evol. 23 (2006) 245-253
9. Garrity D.M., Childs S., and Fishman M.C. The heartstrings mutation in zebrafish causes heart/fin Tbx5 deficiency syndrome. Development 129 (2002) 4635-4645
10. Hahn M.W. Bias in phylogenetic tree reconciliation methods: implications for vertebrate genome evolution. Genome Biol. 8 (2007) R141
11. Horton A.C., Mahadevan N.R., Minguillon C., Osoegawa K., Rokhsar D.S., Ruvinsky I., de Jong P.J., Logan M.P., and Gibson-Brown J.J. Conservation of linkage and evolution of developmental function within the Tbx2/3/4/5 subfamily of T-box genes: implications for the origin of vertebrate limbs. Dev. Genes. Evol. 218 (2008) 613-628
12. Kimmel C.B., Ballard W.W., Kimmel S.R., Ullmann B., and Schilling T.F. Stages of embryonic development of the zebrafish. Dev. Dyn. 203 (1995) 253-310
13. Kishimoto Y., Lee K.H., Zon L., Hammerschmidt M., and Schulte-Merker S. The molecular nature of zebrafish swirl: BMP2 function is essential during early dorsoventral patterning. Development 124 (1997) 4457-4466
14. Logan M. Finger or toe: the molecular basis of limb identity. Development 130 (2003) 6401-6410
15. Meyer A., and Schartl M. Gene and genome duplications in vertebrates: the one-to-four (-to-eight in fish) rule and the evolution of novel gene functions. Curr. Opin. Cell Biol. 11 (1999) 699-704
16. Minguillon C., Del Buono J., and Logan M.P. Tbx5 and Tbx4 are not sufficient to determine limb-specific morphologies but have common roles in initiating limb outgrowth. Dev. Cell. 8 (2005) 75-84
17. Naiche L.A., and Papaioannou V.E. Loss of Tbx4 blocks hindlimb development and affects vascularization and fusion of the allantois. Development 130 (2003) 2681-2693
18. Rallis C., Bruneau B.G., Del Buono J., Seidman C.E., Seidman J.G., Nissim S., Tabin C.J., and Logan M.P. Tbx5 is required for forelimb bud formation and continued outgrowth. Development 130 (2003) 2741-2751
19. Ruvinsky I., Oates A.C., Silver L.M., and Ho R.K. The evolution of paired appendages in vertebrates: T-box genes in the zebrafish. Dev. Genes Evol. 210 (2000) 82-91
20. Tamura K., Yonei-Tamura S., and Izpisúa Belmonte J.C. Differential expression of Tbx4 and Tbx5 in Zebrafish fin buds. Mech. Dev. 87 (1999) 181-184
21. Westerfield M. A Guide for the Laboratory Use of Zebrafish (Danio rerio) (2000), University of Oregon Press, Eugene