Evolution of mouse T-box genes by tandem duplication and cluster dispersion

Genetics

Volumn 144, Issue 1, 1996, Pages 249-254

  Agulnik, Sergei I ^a   Garvey, Nancy ^a   Hancock, Sarah ^a   Ruvinsky, Ilya ^a   Chapman, Deborah L ^b   Agulnik, Irina ^a   Bollag, Roni ^a,c   Papaioannou, Virginia ^b   Silver, Lee M ^a  

^a PRINCETON UNIVERSITY   (United States)

^b Surgeons of Columbia University ^*  (United States)

^c MEDICAL COLLEGE OF GEORGIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENE PRODUCT; TRANSCRIPTION FACTOR;

ANIMAL CELL; ARTICLE; CHROMOSOMAL LOCALIZATION; DNA BINDING; EMBRYO; EMBRYO DEVELOPMENT; EVOLUTION; GENE CLUSTER; GENE MAPPING; GENETIC ANALYSIS; GENETIC LINKAGE; MOUSE; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; TANDEM REPEAT;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CONSERVED SEQUENCE; DNA, COMPLEMENTARY; DNA-BINDING PROTEINS; EVOLUTION, MOLECULAR; MICE; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; PHYLOGENY; REPETITIVE SEQUENCES, NUCLEIC ACID; SEQUENCE HOMOLOGY, AMINO ACID; T-BOX DOMAIN PROTEINS; TRANSCRIPTION FACTORS;

ANIMALIA; CAENORHABDITIS ELEGANS; DROSOPHILA MELANOGASTER; MELANOGASTER; MUS MUSCULUS; MUSCULUS; VERTEBRATA;

EID: 0029743355     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (33)

1. AGULNIK, S. I., R. J. BOLLAG and L. M. SILVER, 1995 Conservation of the T-box gene family from M. musculus to C. elegans. Genomics 25: 214-219.
2. BARLOW, D. P., and H. LEHRACH, 1987 Genetics by gel electrophoresis: the impact of pulsed field gel electrophoresis on mammalian genetics. Trend. Genet. 3: 167-171.
3. BOLLAG, R. J., Z. SIEGFRIED, J. CEBRA-THOMAS, N. GARVEY, E. M. DAVISON et al., 1994 An ancient family of embryonically expressed mouse genes sharing a conserved protein motif with the T-locus. Nature Genet. 7: 383-389.
4. BULFONE, A., S. M. SIMGA, K. SHIMAMURA, A. PETERSON, L. PUELLES et al., 1995 T-brain-1: a homolog of Brachyury whose expression defines molecularly distinct domains within the cerebral cortex. Neuron 15: 63-78.
5. BURKE, D. T., J. M. ROSSI, D. S. KOOS and S. M. TILGHMAN, 1991 A mouse genomic library of yeast artificial chromosome clones. Mammal. Genome 1: 65.
6. CABOT, E. L., and A. T. BECKENBACH, 1989 Simultaneous editing of multiple nucleic acid and protein sequences with ESEE. Comput. Appl. Biosci 5: 233-234.
7. CHAPMAN, D. L., N. GARVEY, S. HANCOCK, M. ALEXIOU, S. AGULNIK et al., 1996 Expression of the T-box family genes, Tbx1-Tbx5, during early mouse development. Dev. Dynamics (in press).
8. CHURCH, G. M., and W. GILBERT, 1984 Genomic sequencing. Proc. Natl. Acad. Sci. USA 81: 1991-1995.
9. FELSENSTEIN, J., 1985 Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
10. GENETICS COMPUTER GROUP, 1989 The Wisconsin GCG Package. Maryland Biotechnology Institute, Madison, WI.
11. GIBSON-BROWN, J. J. G., S. AGULNIK, D. L. CHAPMAN, M. ALEXIOU, N. GARVEY et al., 1996 Evidence of a role for T-box genes in the evolution of limb morphogenesis and the specification of forelimb/hindlimb identity. Mech. Dev. (in press).
12. GREEN, E. D., and M. V. OLSON, 1990 Systematic screening of yeast artificial-chromosome libraries by use of the polymerase chain reaction. Proc. Nad. Acad. Sci. USA 87: 1213-1217.
13. GRUSS, P., and C. WALTHER, 1992 Pax in development. Cell 69: 719-722.
14. HERRMANN, B. G., and A. KISPERT, 1994 The T genes in embryogenesis. Trends Genet. 10: 280-286.
15. HERRMANN, B. G., S. LABEIT, A. POUSTKA, T. KING and H. LEHRACH, 1990 Cloning of the T gene required in mesoderm formation in the mouse. Nature 343: 617-622.
16. JACKSON LABORATORY, 1995 MGD: The Mouse Genome Database (http://www.informatics.jax.org/mgd.html).
17. KISPERT, A., and B. G. HERRMANN, 1993 The Brachyury gene encodes a novel DNA binding protein. EMBO J. 12: 3211-3220.
18. KISPERT, A., B. G. HERRMANN, M. LEPTIN and R. REUTER, 1994 Homologs of the mouse Brachyury gene are involved in the specification of posterior terminal structures in Drosophila, Tribolium, and Locusta. Genes Dev. 8: 2137-2150.
19. KISPERT, A., B. KOSCHORZ and B. HERRMANN, 1995 The T protein encoded by Brachyury is a tissue-specific transcription factor. EMBOJ. 14:4763-4772.
20. KRUMLAUF, R., 1994 Hox genes in vertebrate development. Cell 78: 191-201.
21. KUMAR, S., K. TAMURA and M. NEI, 1993 MEGA: Molecular Evolutionary Genetics Analysis. The Pennsylvania State University, University Park, PA.
22. KUSUMI, K.J. S. SMITH, J. A. SEGRE, D. S. KOOS and E. S. LANDER, 1993 Construction of a large-insert yeast artificial chromosome library of the mouse genome. Mammal. Genome 4: 391-392.
23. NEI, M., and T. GOJOBORI, 1986 Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 3: 418-426.
24. PENDLETON, J. W., B. K. NAGAI, M. T. MURTHA and F. H. RUDDLE, 1993 Expansion of the Hox gene family and the evolution of chordates. Proc. Natl. Acad. Sci. USA 90: 6300-6304.
25. PFLUGFELDER, G. O., H. ROTH and B. POECK, 1992 A homology domain shared between Drosophila optomotor-blind and mouse Brachyury is involved in DNA binding. Biochem. Biophys. Res. Commun. 186: 918-925.
26. ROWE, L. B., J. H. NADEAU, R. TURNER, W. N. FRANKEL, V. A. LETTS et al., 1994 Maps from two interspecific backcross panels available as a community genetic mapping resource. Mammal. Genome 5: 253-274.
27. RZHETSKY, A., and M. NEI, 1992 A simple method for estimating and testing minimum-evolution trees. Mol. Biol. Evol. 9: 945-967.
28. RZHETSKY, A., and M. NEI, 1994 METREE: a program package for inferring and testing minimum-evolution trees. Comput. Appl. Biosci. 10: 409-412.
29. SAITOU, N., and M. NEI, 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
30. SCHUBERT, F. R., K. NIESELT-STRUWE and P. GRUSS, 1993 The antennapedia-type homeobox genes have evolved from three precursors separated early in metazoan evolution. Proc. Natl. Acad. Sci. USA 90: 143-147.
31. SILVER, L. M., 1995 Mouse Genetics: Concepts and Application. Oxford University Press, New York.
32. WALLIN, J., Y. MITZUTANI, K. IMAI, N. MIYASHITA, K. MORIWAKI et al., 1993 A new Pax gene, Pax-9, maps to mouse chromosome 12. Mammal. Genome 4: 354-358.
33. ZHANG, J., and M. NEI, 1996 Evolution of Antennapedia-class homeobox genes. Genetics 142: 295-303.