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Volumn 113, Issue 52, 2009, Pages 16603-16611

Boxed molecular dynamics: A simple and general technique for accelerating rare event kinetics and mapping free energy in large molecular systems

Author keywords

[No Author keywords available]

Indexed keywords

FREE ENERGY; MOLECULAR DYNAMICS;

EID: 73349135352     PISSN: 15206106     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp9074898     Document Type: Article
Times cited : (73)

References (64)
  • 2
    • 84906402993 scopus 로고    scopus 로고
    • In this paper, we refer to the potential of mean force and reaction coordinate free energy profile interchangeably
    • In this paper, we refer to the potential of mean force and reaction coordinate free energy profile interchangeably.
  • 29
    • 84906374367 scopus 로고    scopus 로고
    • In this article, we will often refer to "phase space" constraints. Strictly speaking, the examples that we provide in this work, deal with geometrical constraints, so that "configuration space" is the more appropriate term. However, both AXD and BXD may be carried out in energy space, which involves both, coordinates and momenta, so that they are generalizable to phase space. To emphasize this generality, we often refer to phase space
    • In this article, we will often refer to "phase space" constraints. Strictly speaking, the examples that we provide in this work, deal with geometrical constraints, so that "configuration space" is the more appropriate term. However, both AXD and BXD may be carried out in energy space, which involves both, coordinates and momenta, so that they are generalizable to phase space. To emphasize this generality, we often refer to phase space.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.