Multiple antimicrobial resistance of gram-negative bacteria from natural oligotrophic lakes under distinct anthropogenic influence in a tropical region

Microbial Ecology

Volumn 58, Issue 4, 2009, Pages 762-772

  Pontes, D S ^a   Pinheiro, F A ^a   Lima Bittencourt, C I ^a   Guedes, R L M ^a   Cursino, L ^b   Barbosa, F ^a   Santos, F R ^a   Chartone Souza, E ^a   Nascimento, A M A ^a  

^a FEDERAL UNIVERSITY OF MINAS GERAIS   (Brazil)

^b New York State Agricultural Experiment Station   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACINETOBACTER; BACTERIA (MICROORGANISMS); ENTEROBACTER; NEGIBACTERIA; PSEUDOMONAS;

ANTIINFECTIVE AGENT; BACTERIAL DNA; BETA LACTAMASE; FRESH WATER; RNA 16S;

ARTICLE; BACTERIAL GENE; DRUG EFFECT; GENETICS; GRAM NEGATIVE BACTERIUM; ISOLATION AND PURIFICATION; MICROBIOLOGICAL EXAMINATION; MICROBIOLOGY; MULTIDRUG RESISTANCE; PHYLOGENY;

ANTI-BACTERIAL AGENTS; BETA-LACTAMASES; DNA, BACTERIAL; DRUG RESISTANCE, MULTIPLE, BACTERIAL; FRESH WATER; GENES, BACTERIAL; GRAM-NEGATIVE BACTERIA; MICROBIAL SENSITIVITY TESTS; PHYLOGENY; RNA, RIBOSOMAL, 16S; WATER MICROBIOLOGY;

EID: 73349112284     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-009-9539-3     Document Type: Article

References (65)

1. Agerso Y, Sandvang D (2005) Class 1 integrons and tetracycline resistance genes in alcaligenes, Arthrobacter, and Pseudomonas spp. isolated from pigsties and manured soil. Appl Environ Microbiol 71: 7941-7947.
2. Alonso A, Sanchez P, Martinez JL (2001) Environmental selection of antibiotic resistance genes. Environ Microbiol 3: 1-9.
3. Andrews JM (2001) BSAC standardized disc susceptibility testing method. J Antimicrob Chemother 48: 43-57.
4. Ash RJ, Mauck B, Morgan M (2002) Antibiotic resistance of Gram-negative bacteria in rivers, United States. Emerg Infect Dis 8: 713-716.
5. Baquero F, Martínez JL, Cantón R (2008) Antibiotics and antibiotic resistance in water environments. Curr Opin Biotechnol 19: 260-265.
6. Barbosa FAR, Ppadisãk J (2002) The forgotten lake stratification pattern: atelomixis, and its ecological importance. Verh Int Verein Limnol 28: 1385-1395.
7. Brizas L, Zarazaga M, Saenz Y, Ruiz-Larrea F, Torres C (2002) Beta-lactamases in ampicillin-resistant Escherichia coli isolates from foods, humans, and healthy animals. Antimicrob Agents Chemother 46: 3156-3163.
8. Castro-Escarpulli G, Figueras MJ, Aguilera-Arreola G, Soler L, Fernandez-Rendon E, Aparicio GO, Guarro J, Chacon MR (2003) Characterisation of Aeromonas spp. isolated from frozen fish intended for human consumption in Mexico. Int J Food Microbiol 84: 41-49.
9. Díaz-Cruz MS, Alda MJL, Barceló D (2003) Environmental behavior and analysis of veterinary and human drugs in soils, sediments and sludge. Trends Anal Chem 22: 340-351.
10. Dolzani L, Tonin E, Lagatolla C, Monti-Bragadin C (1994) Typing of Staphylococcus aureus by amplification of the 16S-23S intergenic spacer sequences. FEMS Microbiol Lett 119: 167-174.
11. Drancourt M, Bollet C, Carlioz A, Martelin R, Gayral JP, Raoult D (2000) 16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates. J Clin Microbiol 38: 3623-3630.
12. Drucker VV, Panasyuk EY (2006) Potentially pathogenic bacteria in a microbial community of Lake Baikal. Hydrobiologia 568: 267-271.
13. Ewing B, Green P (1998) Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 8: 186-194.
14. Fluit AC, Visser MR, Schmitz FJ (2001) Molecular detection of antimicrobial resistance. Clin Microbiol Rev 14: 836-871.
15. George AM (1996) Multidrug resistance in enteric and other gram-negative bacteria. FEMS Microbiol Lett 139: 1-10.
16. Gilliver MA, Bennett M, Begon M, Hazel SM, Hart CA (1999) Antibiotic resistance found in wild rodents. Nature 401: 233-234.
17. Goñi-Urriza M, Capdepuy M, Arpin C, Raymond N, Caumette P, Quentin C (2000) Impact of an urban effluent on antibiotic resistance of riverine Enterobacteriaceae and Aeromonas spp. Appl Environ Microbiol 66: 125-132.
18. Golterman HL, Clymo RS, Ohnstad MAM (1978) Methods for chemical analysis of fresh waters. Blackwell Scientific, Oxford.
19. Gordon D, Abajian C, Green P (1998) Consed: a graphical tool for sequence finishing. Genome Res 8: 195-202.
20. Green P. (1994) PHRAP documentation. http://www. phrap. org.
21. Guardabassi L, Dalsgaard A, Olsen JE (1999) Phenotypic characterization and antibiotic resistance of Acinetobacter spp. isolated from aquatic sources. J Appl Microbiol 87: 659-667.
22. Hall BG, Barlow M (2004) Evolution of the serine β-lactamases: past, present and future. Drug Resist Updat 7: 111-123.
23. Hazen TC (1988) Fecal coliforms as indicators in tropical waters: a review. Int J Toxic Assess 3: 461-47.
24. Henriques I, Moura A, Alves A, Saavedra MJ, Correia A (2006) Analysing diversity among beta-lactamase encoding genes in aquatic environments. FEMS Microbiol Ecol 56: 418-429.
25. Hujer KM, Hujer AM, Hulten EA, Bajaksouzian S, Adams JM, Donskey CJ, Ecker DJ, Massire C, Eshoo MW, Sampath R, Thomson JM, Rather PN, Craft DW, Fishbain JT, Ewell AJ, Jacobs MR, Paterson DL, Bonomo RA (2006) Analysis of antibiotic resistance genes in multidrug-resistant Acinetobacter sp. isolates from military and civilian patients treated at the Walter Reed Army Medical Center. Antimicrob Agents Chemother 50: 4114-4123.
26. Kirby JT, Sader HS, Walsh TR, Jones RN (2004) Antimicrobial susceptibility and epidemiology of a worldwide collection of Chryseobacterium spp.: report from the SENTRY Antimicrobial Surveillance Program (1997-2001). J Clin Microbiol 42: 445-448.
27. Krumperman PH (1983) Multiple antibiotic resistance indexing Escherichia coli to identify risk sources of faecal contamination of foods. Appl Environ Microbiol 46: 165-170.
28. Krumperman PH (1985) Multiple antibiotic resistance indexing of Escherichia coli to identify high-risk sources of fecal contamination of foods. Appl Environ Microbiol 46: 165-170.
29. Kummerer K (2004) Resistance in the environment. J Antimicrob Chemother 54: 311-320.
30. Kuske CR, Barns SM, Busch JD (1997) Diverse uncultivated bacterial groups from soils of the arid southwestern United States that are present in many geographic regions. Appl Environ Microbiol 63: 3614-3621.
31. Laitinen S, Nevalainen A, Kotimaa M, Liesivuori J, Martikainen P (1992) Relationship between bacterial counts and endotoxin concentrations in the air of wastewater treatment plants. Appl Environ Microbiol 58: 3774-3776.
32. Latini AO, JrM P (2004) Reduction of a native fish fauna by alien species: an example from Brazilian freshwater tropical lakes. Fish Manag Ecol 11: 71-79.
33. Levy S (1997) Antibiotic resistance: an ecological imbalance. In Antibiotic resistance: origins, evolution, selection and spread. In Ciba Foundation Symposium 207.
34. Levy SB (2001) Antibiotic resistance: consequences of inaction. Clin Infect Dis 33: 124-129.
35. Levy SB (2005) Antibiotic resistance-the problem intensifies. Adv Drug Deliv Rev 57: 1446-1450.
36. Lima-Bittencourt CI, Cursino L, Gonçalves-Dornelas H, Pontes DS, Nardi RMD, Callisto M, Chartone-Souza E, Nascimento AMA (2007) Multiple antimicrobial resistance in Enterobacteriaceae isolates from pristine freshwater. Gen Mol Res 6: 510-521.
37. Livermore DM (1995) Beta-lactamases in laboratory and clinical resistance. Clin Microbiol Rev 8: 557-584.
38. Lobova TI, Maksimova EY, Popova LY, Pechurkin NS (2002) Geographical and seasonal distribution of multiple antibiotic resistance of heterotrophic bacteria of Lake Shira. Aquat Ecol 36: 299-307.
39. Lodise TP Jr, Lomaestro B, Drusano GL (2007) Piperacillin-tazobactam for Pseudomonas aeruginosa infection: clinical implications of an extended-infusion dosing strategy. Clin Infect Dis 44: 357-363.
40. Lozupone C, Knight R (2005) UniFrac: a new phylogenetic method for comparing microbial communities. Appl Environ Microbiol 71: 8228-8235.
41. Lozupone C, Hamady M, Knight R (2006) UniFrac-an online tool for comparing microbial community diversity in a phylogenetic context. BMC Bioinformatics 7: 371.
42. Lu JJ, Perng CL, Lee SY, Wan CC (2000) Use of PCR with universal primers and restriction endonuclease digestions for detection and identification of common bacterial pathogens in cerebrospinal fluid. J Clin Microbiol 38: 2076-2080.
43. Mabilat C, Courvalin P (1990) Development of "olygotyping" for characterization and molecular epidemiology of TEM-lactamase in members of the family Enterobacteriaceae. Antimicrob Agents Chemother 34: 2210-2216.
44. MacGowana AP, Wise R (2001) Establishing MIC breakpoints and the interpretation of in vitro susceptibility tests. J Antimicrob Chemother 1: 17-28.
45. Mackereth FJH, Heron J, Talling JF (1978) Water analysis: some revised methods for limnologists. Freshwater Biological Association Scientific Publication, 36, Titus Wilson & Sons Ltd, Kendal, p 117p.
46. Nascimento AMA, Chartone-Souza E (1999) Re-evaluation of antibiotic and mercury resistance in Escherichia coli populations isolated in 1978 from Amazonian rubber tree tappers and Indians. Res Microbiol 150: 407-411.
47. Nascimento AMA, Cursino L, Gonçalves-Dornelas H, Reis A, Chartone-Souza E, Marini MA (2003) Antibiotic-resistant Gram-negative bacteria in birds from the Brazilian Atlantic forest. Condor 105: 358-361.
48. National Committee for Clinical Laboratory Standards (NCCLS) (2001) Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically. ASM, Washington.
49. Ndip RN, Dilonga HM, Ndip LM, Akoachere JF, Nkuo Akenji T (2005) Pseudomonas aeruginosa isolates recovered from clinical and environmental samples in Buea, Cameroon: current status on biotyping and antibiogram. Trop Med Int Health 10: 74-81.
50. O'Brien TF (2002) Emergence, spread, and environmental effect of antimicrobial resistance: how use of an antimicrobial anywhere can increase resistance to any antimicrobial anywhere else. Clin Infect Dis 34: 78-84.
51. Pagioro TA, Velho LFM, Lansac-Tôha FA, Pereira DG, Nakamura AKS, Perenha MCZ, Santos VD (2003). Influência do grau de trofia sobre os padrões de abundância de bactérias e protozoários planctônicos em reservatórios do Estado do Paraná. In: Rodrigues, L.; Agostinho, A. A.; Gomes, L. C. & Thomaz, S. M. (eds). Anais do Workshop Produtividade em Reservatórios e Bioindicadores. Nupélia. Maringá. 281p.
52. Petrucio MM, Barbosa FAR, Furtado ALS (2006) Bacterioplankton and phytoplankton production in seven lakes in the middle Rio Doce basin, south-east Brazil. Limnologica 36: 192-203.
53. Pontes DS, Lima-Bittencourt CI, Azevedo MSP, Chartone-Souza E, Nascimento AMA (2007) Phenotypic and genetic analysis of Enterobacter spp. from a Brazilian oligotrophic freshwater lake. Can J Microbiol 53: 983-991.
54. Institute SAS (1987) SAS/STAT guide for personal computers, version 6. SAS Institute, Cary, NC.
55. Salas HJ, Martino P (1991) A simplified phosphorus trophic state model for warm-water tropical lakes. Water Res 25: 341-350.
56. Singer RS, Ward MP, Maldonado G (2006) Can landscape ecology untangle the complexity of antibiotic resistance? Nat Rev Microbiol 4: 943-952.
57. Speldooren V, Heym B, Labia R, Nicolas-Chanoine MH (1998) Discriminatory detection of inhibitor-resistant beta-lactamases in Escherichia coli by single-strand conformation polymorphism-PCR. Antimicrob Agents Chemother 42: 879-884.
58. Stabili L, Cavallo RA (2004) Biodiversity of culturable heterotrophic bacteria in the southern Adriatic Sea Italian coastal waters. Sci Mar 68: 31-41.
59. Steel RGD, Torrie JH (1980) Principles and procedures of statistics: a biometrical approach. McGraw-Hill, Toronto, Ontario, Canada.
60. Summers AO (2002) Generally overlooked fundamentals of bacterial genetics and ecology. Clin Infect Dis 34: 85-92.
61. Teuber M (2001) Veterinary use and antibiotic resistance. Curr Opin Microbiol 4: 493-499.
62. Valdezate S, Vindel A, Loza E, Baquero F, Cantón R (2001) Antimicrobial susceptibilities of unique Stenotrophomonas maltophilia clinical strains. Antimicrob Agents Chemother 45: 1581-1584.
63. Watanable K, Kodama Y, Harayama S (2001) Design and evaluation of PCR primers to amplify 16S ribosomal DNA fragments used for community fingerprinting. J Microbiol Methods 44: 253-262.
64. Weldhagen GF (2004) Integrons and beta-lactamases-a novel perspective on resistance. Int J Antimicrob Agents 23: 556-562.
65. White DG, Mcdermott PF (2001) Emergence and transfer of antibacterial resistance. J Dairy Sci 84: 151-155.