Degradation of pyrene by an enteric bacterium, Leclercia adecarboxylata PS4040

Biodegradation

Volumn 21, Issue 1, 2010, Pages 59-69

  Sarma, Priyangshu Manab ^a   Duraja, Prem ^b   Deshpande, Shilpanjali ^c   Lal, Banwari ^a  

^a THE ENERGY AND RESOURCES INSTITUTE   (India)

^b INDIAN AGRICULTURAL RESEARCH INSTITUTE   (India)

^c TERI UNIVERSITY   (India)

Author keywords

Enteric bacteria; Leclercia adecarboxylata; Pyrene degradation

Indexed keywords

BACTERIA; BIOMOLECULES; CARBON; GAS CHROMATOGRAPHY; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; METABOLITES; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PYRENE; REACTION INTERMEDIATES; SOIL POLLUTION;

BACTERIAL STRAINS; CONTAMINATED SOILS; ENTERIC BACTERIA; GAS CHROMATOGRAPHY-MASS SPECTROMETRY; INTERMEDIATE PRODUCT; LECLERCIA ADECARBOXYLATA; OXIDATION PRODUCTS; SOLE SOURCE OF CARBON;

BIODEGRADATION;

BACTERIUM; BIOCHEMICAL COMPOSITION; BIOCHEMISTRY; BIODEGRADATION; GAS CHROMATOGRAPHY; MASS SPECTROMETRY; METABOLITE; NUCLEAR MAGNETIC RESONANCE; PAH; PYRENE;

BACTERIA (MICROORGANISMS); ENTEROBACTERIACEAE; LECLERCIA ADECARBOXYLATA;

EID: 73249127781     PISSN: 09239820     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10532-009-9281-z     Document Type: Article

References (33)

1. Anastasi A, Coppola T, Prigione V, Varese GC (2008) Pyrene degradation and detoxification in soil by a consortium of basidiomycetes isolated from compost: role of laccases and peroxidases. J Hazard Mater 165: 1229-1233.
2. Baek KH, Yoon BD, Cho DH, Kim BH, Oh HM, Kim HS (2009) Monitoring bacterial population dynamics using real-time PCR during the bioremediation of crude-oil-contaminated soil. J Microbiol Biotechnol 19: 339-345.
3. Bezalel L, Hadar Y, Fu PP, Freeman JP, Cerniglia CE (1996) Initial oxidation products in the metabolism of pyrene anthracene, fluorene, and dibenzothiophene by white rot fungus Pleurotus ostreatus. Appl Environ Microbiol 62: 2554-2559.
4. Bhattacharya D, Sarma PM, Krishnan S, Mishra S, Lal B (2003) Evaluation of the genetic diversity among some strains of Pseudomonas citronellolis isolated from oily sludge contaminated sites. Appl Environ Microbiol 69: 1435-1441.
5. Brezna B, Kweon O, Stingley RL, Freeman JP, Khan AA, Polek B, Jones RC, Cerniglia CE (2006) Molecular characterization of cytochrome P450 genes in the polycyclic aromatic hydrocarbon degrading Mycobacterium vanbaalenii PYR-1. Appl Microbiol Biotechnol 71: 522-532.
6. Buratti M, Pellegrino O, Brambilla G, Colombi A (2000) Urinary excretion of 1-hydroxypyrene as a biomarker of exposure to polycyclic aromatic hydrocarbons from different sources. Biomarkers 5: 368-372.
7. Capotorti G, Digianvincenzo P, Cesti P, Bernardi A, Guglielmetti G (2004) Pyrene and benzo(a)pyrene metabolism by an Aspergillus terreus strain isolated from a polycyclic aromatic hydrocarbons polluted soil. Biodegradation 15: 79-85.
8. Costera A, Feidt C, Dziurla MA, Monteau F, Bizec BL, Rychen G (2009) Bioavailability of polycyclic aromatic hydrocarbons (PAHs) from coil and hay matrices in lactating goats. J Agric Food Chem 57: 5352-5357.
9. Demaneche S, Meyer S, Micoud J, Louwagie M, Willison JC, Jouanneau Y (2004) Identification and functional analysis of two ring hydroxylating dioxygenases from a Sphingomonas strain that degrades various polycyclic aromatic hydrocarbons. Appl Environ Microbiol 70: 6714-6725.
10. Diaz E, Ferrandez A, Prieto MA, Garcia JL (2001) Bioremediation of aromatic compounds by Escherichia coli. Microbiol Mol Biol Rev 65: 523-569.
11. Heitkamp MA, Freeman JP, Miller DW, Cerniglia CE (1998) Pyrene degradation by a Mycobacterium sp.: identification of ring oxidation and ring fission products. Appl Environ Microbiol 64: 2556-2565.
12. Kanaly RA, Harayama S (2000) Biodegradation of high molecular weight polycyclic aromatic hydrocarbons by bacteria. J Bacteriol 182: 2059-2067.
13. Kasuga K, Habe H, Chung JS, Kato H, Yoshida T, Nojiri H, Yamane H, Omari T (2001) Isolation and characterization of genes encoding a novel oxygenase component of angular dioxygenase from gram positive dibenzofuran-degrader Terrabacter sp. strain DBF63. Biochem Biophys Res Commun 238: 195-204.
14. Kazunga C, Aitken MD (2000) Products from the incomplete metabolism of pyrene by polycyclic aromatic hydrocarbon degrading bacteria. Appl Environ Microbiol 66: 1917-1922.
15. Kim YH, Freeman JP, Moody JD, Engesser KH, Cerniglia CE (2005) Effects of pH on the degradation of phenanthrene and pyrene by Mycobacterium vanbaalenii PYR-1. Appl Microbiol Biotechnol 67: 275-285.
16. Kim SJ, Kweon O, Jones RC, Edmondson RD, Cerniglia CE (2007) Complete and integrated pyrene degradation pathway in Mycobacterium vanbaalenii PYR-1 based on system biology. J Bacteriol 189: 464-472.
17. Kim SJ, Kweon O, Jones RC, Edmondson RD, Cerniglia CE (2008) Genomic analysis of polycyclic aromatic hydrocarbon degradation in Mycobacterium vanbaalenii PYR-1. Biodegradation 19: 259-881.
18. Lafortune I, Juteau P, Déziel E, Lépine F, Beaudet R, Villemur R (2009) Bacterial diversity of a consortium degrading high-molecular-weight polycyclic aromatic hydrocarbons in a two-liquid phase biosystem. Microb Ecol 57: 455-468.
19. Lal B, Khanna S (1996) Degradation of crude oil by Acinetobacter calcoaceticus and Alcaligenes odorans. J Appl Bacteriol 81: 355-362.
20. Liang Y, Gardner DR, Miller CD, Chen D, Anderson AJ, Weimer BC, Sims R (2006) Study of biochemical pathways and enzyme in pyrene degradation by Mycobacterium sp. strain KMS. Appl Environ Microbiol 72: 7821-7828.
21. Mishra S, Sarma PM, Lal B (2004) Crude oil degradation efficiency recombinant lux tagged Acinetobacter baumannii strain and its survival in crude oil contaminated soil microcosm. FEMS Microbiol Lett 235: 323-331.
22. Rehmann K, Noll HP, Steinberg CEW, Kettrup AA (1998) Pyrene degradation by Mycobacterium sp. strain. KR2. Chemosphere 36: 2977-2992.
23. Sarma PM, Bhattacharya D, Krishnan S, Lal B (2004a) Degradation of polycyclic aromatic hydrocarbons by a novel enteric bacterium, Leclercia adecarboxylata. Appl Environ Microbiol 70: 3163-3166.
24. Sarma PM, Bhattacharya D, Krishnan S, Lal B (2004b) Assessment of intra species diversity among the strains of Acinetobacter baumannii isolated from sites contaminated with petroleum hydrocarbons. Can J Microbiol 50: 405-414.
25. Seo JS, Keum YS, Hu Y, Lee SE, Li QX (2007) Degradation of phenanthrene by Burkholderia sp. C3: initial 1, 2- and 3, 4-dioxygenation and meta- and ortho-cleavage of naphthalene-1, 2-diol. Biodegradation 18: 123-131.
26. Seo JS, Keum YS, Li QX (2009) Bacterial degradation of aromatic compounds. Int J Environ Res Public Health 2009(6): 278-309.
27. Sheng XF, He LY, Zhou L, Shen YY (2009) Characterization of Microbacterium sp. F10a and its role in polycyclic aromatic hydrocarbon removal in low-temperature soil. Can J Microbiol 55: 529-535.
28. Silva IS, Santos ED, Menezes CR, Faria AF, Franciscon E, Grossman M, Durrant LR (2009) Bioremediation of a polyaromatic hydrocarbon contaminated soil by native soil microbiota and bioaugmentation with isolated microbial consortia. Bioresour Technol 100(20): 4669-4675.
29. Tam NF, Wong YS (2008) Effectiveness of bacterial inoculum and mangrove plants on remediation of contaminated with polycyclic aromatic hydrocarbons. Mar Pollut Bull 57: 716-726.
30. Vila J, Lopez Z, Sabate J, Minguillon C, Solanas AM, Grifoll M (2001) Identification of a novel metabolite in the degradation of pyrene by Mycobacterium sp. strain AP1: actions of the isolate on two and three ring PAH. Appl Environ Microbiol 67: 5497-5505.
31. Watanabe K (2001) Microorganisms relevant to bioremediation. Curr Opin Biotechnol 12: 237-241.
32. Wiele T, Vanhaecke VL, Boeckaert C, Peru K, Headley J, Verstraete W, Siciliano S (2005) Human colon microbiota transform polycyclic aromatic hydrocarbons to estrogenic metabolites. Environ Health Perspect 113: 6-10.
33. Yutse L, Corbella ME, Turiegano MJ, Karlson U, Puyet A, Rojo F (2000) Characterization of bacterial strains able to grow on high molecular mass residues from crude oil processing. FEMS Microbiol Ecol 32: 69-75.