Application of PCR-based serogrouping of selected Salmonella serotypes in Malaysia

Journal of Infection in Developing Countries

Volumn 3, Issue 6, 2009, Pages 420-428

  Bee, Kim Lim ^a   Kwai, Lin Thong ^a  

^a UNIVERSITY OF MALAYA   (Malaysia)

Author keywords

Multiplex PCR; Salmonella; Serogroup; Serotype

Indexed keywords

BACTERIAL ANTIGEN; GENE PRODUCT; H ANTIGEN; O ANTIGEN; UNCLASSIFIED DRUG; VI ANTIGEN;

ACCURACY; ANTIGEN EXPRESSION; ARTICLE; BACTERIAL STRAIN; GENE CLUSTER; GENE TARGETING; MALAYSIA; MULTIPLEX POLYMERASE CHAIN REACTION; NONHUMAN; SALMONELLA ENTERICA; SENSITIVITY AND SPECIFICITY; SEROTYPE;

SALMONELLA; SALMONELLA ENTERICA; SALMONELLA PARATYPHI; SALMONELLA TYPHI;

EID: 73249124754     PISSN: 20366590     EISSN: 19722680     Source Type: Journal    
DOI: 10.3855/jidc.412     Document Type: Article

References (33)

1. Kim S, Frye JG, Hu J, Fedorka-Cray PJ, Gautom R, Boyle DS (2006) Multiplex PCR-based method for identification of common clinical serotypes of Salmonella enterica subsp. Enterica. J Clin Microbiol 44: 3608-3615.
2. Yan SS, Pendrak ML, Abela-Ridder B, Punderson JW, Fedorko DP, Foley SL (2003) An overview of Salmonella typing public health perspectives. Clin Applied Immunol Rev 4: 189-204.
3. th revision, WHO Collaborating Centre for Reference Research on Salmonella, Institut Pasteur, Paris.
4. Fitzgerald C, Sherwood R, Gheesling LG, Brenner FW, Fields PI (2003) Molecular analysis of the rfb O antigen gene cluster of Salmonella enterica serogroup O:6,14 and development of a serogroup-specific PCR assay. Appl Environ Microbiol 69: 6099-6105.
5. WYK P, Reeves P (1989) Identification and sequence of the gene for abequose synthase, which confers antigenic specificity on group B Salmonellae: Homology with galactose epimerase. J Bacteriol 171: 5687-5693.
6. Luk JMC, Kongmuang U, Reeves PR, Lindberg AA (1993) Selective amplification of abequose and paratose synthase genes (rfb) by polymerase chain reaction for identification of Salmonella major serogroups (A, B, C2 and D). J Clin Microbiol 31: 2118-2123.
7. Herrera-Leon S, Ramiro R, Arroyo M, Diez R, Usera MA, Echeita MA (2007) Blind comparison of traditional serotyping with three multiplex PCRs for the identification of Salmonella serotypes. Res Microbiol 158: 122-127.
8. th ed., vol. 1. ASM Press, Washington, D.C. 654-671.
9. Lindberg AA, Le Minor L (1984) Serology of Salmonella. Methods Microbiol 15: 1-141.
10. Luk JMC, Lindberg AA (1991) Anti-Salmonella lipopolysaccharide monoclonal antibodies: Characterization of Salmonella BO-, CO-, DO-, and EO-specific clones and their diagnostic usefulness. J Clin Microbiol 29: 2424-2433.
11. Liu D, Verma NK, Romana LK, Reeves PR (1991) Relationships among the rfb Regions of Salmonella Serovars A, B, and D. J Bacteriol 173: 4814-4819.
12. Xiang SH, Haase AM, Reeves PR (1993) Variation of the rfb gene clusters in Salmonella enterica. J Bacteriol 175:4877-4884.
13. Curd H, Liu D, Reeves PR (1998) Relationships among the O-antigen gene clusters of Salmonella enterica groups B, D1, D2, and D3. J Bacteriol 180: 1002-1007.
14. Fitzgerald C, Gheesling L, Collins M, Fields PI (2006) Sequence analysis of the rfb loci, encoding proteins involved in the biosynthesis of the Salmonella enterica O17 and O18 antigens: Serogroup-specific identification by PCR. Appl Environ Microbiol 72: 7949-7953.
15. Verma N, Reeves P (1989) Identification and sequence of rfbS and rfbE, which determine antigenic specificity of group A and group D Salmonellae. J Bacteriol 171: 5694-5701.
16. Lee SJ, Romana LK, Reeves PR (1992) Sequences and structural analysis of the rfb (O antigen) gene cluster from a serogroup C1 Salmonella enterica strain. J Gen Microbiol 138: 1843-1855.
17. Liu D, Cole RA, Reeves PR (1996) An O-antigen processing function for Wzx (RfbX): a promising candidate for O-unit flippase. J Bacteriol 178: 2102-2107.
18. Marolda CL, Vicarioli J, Valvano MA (2004) Wzx proteins involved in biosynthesis of O antigen function in association with the first sugar of the O-specific lipopolysaccharide subunit. Microbiol 150: 4095-4105.
19. Mortimer CKB, Peters TM, Gharbia SE, Logan JMJ, Arnold C (2004) Towards the development of a DNA-sequence based approach to serotyping of Salmonella enterica BMC Microbiol 4: 31.
20. Selander RK, Smith NH, Li J, Beltran P, Ferris KE, Kopecko DJ, Rubin FA (1992) Molecular evolutionary genetics of the cattle-adapted serovar Salmonella Dublin. J Bacteriol 174: 3587-3592.
21. Hashimoto Y, Li N, Yokoyama H, Ezaki T (1993) Complete nucleotide sequence and molecular characterization of ViaB region encoding Vi antigen in Salmonella typhi. J Bacteriol 175: 4456-4465.
22. Levy H, Diallo S, Tennant SM, Livio S, Sow SO, Tapia M, Fields PI, Mikoleit M, Tamboura B, Kotloff KL, Lagos R, Nataro JP, Galen JE, Levine MM (2008) PCR method to identify Salmonella enterica serovars Typhi, Paratyphi A, and Paratyphi B among Salmonella isolates from the blood of patients with clinical enteric fever. J Clin Microbiol 46: 1861-1866.
23. Lüderitz O, Staub AM, Westphal O (1966) Immunochemistry of O and R antigens of Salmonella and related Enterobacteriaceae Bacteriol Rev 30: 192-255.
24. Way JS, Josephson KL, Pillai SD, Abbaszadegan M, Gerba CP, Pepper IL (1993) Specific detection of Salmonella spp. by multiplex polymerase chain reaction. Appl Environ Microbiol 59: 1473-1479.
25. Hirose K, Itoh K, Nakajima H, Kurazono T, Yamaguchi M, Moriya K, Ezaki T, Kawamura Y, Tamura K, Watanabe H (2002) Selective amplification of tyv (rfbE), prt (rfbS), viaB, and fliC genes by multiplex PCR for identification of Salmonella enterica serovars Typhi and Paratyphi A. J Clin Microbiol 40: 633-636.
26. Lim YH, Hirose K, Izumiya H, Arakawa E, Takahashi H, Terajima J, Itoh K, Tamura K, Kim SI, Watanabe H (2003) Multiplex polymerase chain reaction assay for selective detection of Salmonella enterica serovar Typhimurium. Jpn J Infect Dis 56: 151-155.
27. Alvarez J, Sota M, Vivanco AB, Perales I, Cisterna R, Rementeria A, Garaizar J (2004) Development of a multiplex PCR technique for detection and epidemiological typing of Salmonella in human clinical samples. J Clin Microbiol 42: 1734-1738.
28. Henegariu O, Heerema NA, Dlouhy SR, Vance GH, Vogt PH (1997) Multiplex PCR: Critical parameters and step-by-step protocol. BioTechniques 23: 504-511.
29. Moganedi KLM, Goyvaerts EMA, Venter SN, Sibara MM (2007) Optimisation of the PCR-invA primers for the detection of Salmonella in drinking and surface waters following a pre-cultivation step. Water SA 33: 195-202.
30. Hoorfar J, Cook N, Malorny B, Wagner M, De Medici D, Abdulmawjood A, Fach P (2003) Making internal amplification control mandatory for diagnostic PCR. J Clin Microbiol 41: 5835.
31. Malorny B, Hoorfar J, Hugas M, Heuvelink A, Fach P, Ellerbroek L, Bunge C, Dorn C, Helmuth R (2003) Interlaboratory diagnostic accuracy of a Salmonella specific PCR-based method. Int J Food Microbiol 89: 241- 249.
32. Elnifro EM, Ashshi AM, Cooper RJ, Klapper PE (2000) Multiplex PCR: optimization and application in diagnostic virology. Clin Microbiol Rev 13: 559-570.
33. Widjojoatmodjo MN, Fluit AC, Torensma R, Keller BH, Verhoef J (1991) Evaluation of the magnetic immuno PCR assay for rapid detection of Salmonella. Eur J Clin Microbiol Infect Dis 10: 935-938.