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Volumn 75, Issue 24, 2009, Pages 7797-7806

Influence of species specificity and other factors on bacteria associated with the Coral Stylophora pistillata in Taiwan

Author keywords

[No Author keywords available]

Indexed keywords

16S RRNA GENE; BACTERIAL COMMUNITY; CARIBBEAN SEA; CLUSTERING ANALYSIS; COMPARATIVE ANALYSIS; CORAL COLONIES; DATA SETS; KENTING; NON-PARAMETRIC; PISTILLATA; POPULATION STRUCTURES; RIBOSOMAL GENES; SCALING ANALYSIS;

EID: 73249122125     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.01418-09     Document Type: Article
Times cited : (65)

References (33)
  • 1
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann, R. I., W. Ludwig, and K. H. Schleifer. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:143-169.
    • (1995) Microbiol. Rev , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.H.3
  • 2
    • 42049108402 scopus 로고    scopus 로고
    • Bourne, D., Y. Iida, S. Uthicke, and C. Smith-Keune. 2008. Changes in coral-associated microbial communities during a bleaching event. Isme J. 2:350-363.
    • Bourne, D., Y. Iida, S. Uthicke, and C. Smith-Keune. 2008. Changes in coral-associated microbial communities during a bleaching event. Isme J. 2:350-363.
  • 3
    • 22744438425 scopus 로고    scopus 로고
    • Diversity of bacteria associated with the coral Pocillopora damicornis from the Great Barrier Reef
    • Bourne, D. G., and C. B. Munn. 2005. Diversity of bacteria associated with the coral Pocillopora damicornis from the Great Barrier Reef. Environ. Microbiol. 7:1162-1174.
    • (2005) Environ. Microbiol , vol.7 , pp. 1162-1174
    • Bourne, D.G.1    Munn, C.B.2
  • 4
    • 35349031195 scopus 로고    scopus 로고
    • Diversity of the bacterial communities associated with the azooxanthellate deep water octocorals Leptogorgia minimata, Iciligorgia schrammi, and Swiftia exertia
    • Bruck, T. B., W. M. Bruck, L. Z. Santiago-Vazquez, P. J. McCarthy, and R. G. Kerr. 2007. Diversity of the bacterial communities associated with the azooxanthellate deep water octocorals Leptogorgia minimata, Iciligorgia schrammi, and Swiftia exertia. Mar. Biotechnol. (NY) 9:561-576.
    • (2007) Mar. Biotechnol , vol.9 , Issue.NY , pp. 561-576
    • Bruck, T.B.1    Bruck, W.M.2    Santiago-Vazquez, L.Z.3    McCarthy, P.J.4    Kerr, R.G.5
  • 5
    • 0042780886 scopus 로고    scopus 로고
    • Bunkley-Williams, L., J. Morelock, and E. H. Williams, Jr. 1991. Lingering effects of the 1987 mass bleaching of Puerto Rican coral reefs in mid to late 1988. J. Aquat. Anim. Health 3:242-247.
    • Bunkley-Williams, L., J. Morelock, and E. H. Williams, Jr. 1991. Lingering effects of the 1987 mass bleaching of Puerto Rican coral reefs in mid to late 1988. J. Aquat. Anim. Health 3:242-247.
  • 6
    • 0035983607 scopus 로고    scopus 로고
    • Characterization of the bacterial consortium associated with black band disease in coral using molecular microbiological techniques
    • Cooney, R. P., O. Pantos, M. D. Le Tissier, M. R. Barer, A. G. O'Donnell, and J. C. Bythell. 2002. Characterization of the bacterial consortium associated with black band disease in coral using molecular microbiological techniques. Environ. Microbiol. 4:401-413.
    • (2002) Environ. Microbiol , vol.4 , pp. 401-413
    • Cooney, R.P.1    Pantos, O.2    Le Tissier, M.D.3    Barer, M.R.4    O'Donnell, A.G.5    Bythell, J.C.6
  • 8
    • 84986773541 scopus 로고
    • Composition of mucus released by coral reef coelenterates
    • Ducklow, H. W., and R. Mitchell. 1979. Composition of mucus released by coral reef coelenterates. Limnol. Oceanog. 24:706-714.
    • (1979) Limnol. Oceanog , vol.24 , pp. 706-714
    • Ducklow, H.W.1    Mitchell, R.2
  • 9
    • 0036253488 scopus 로고    scopus 로고
    • Partitioning of bacterial communities between seawater and healthy, black band diseased, and dead coral surfaces
    • Frias-Lopez, J., A. L. Zerkle, G. T. Bonheyo, and B. W. Fouke. 2002. Partitioning of bacterial communities between seawater and healthy, black band diseased, and dead coral surfaces. Appl. Environ. Microbiol. 68:2214-2228.
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 2214-2228
    • Frias-Lopez, J.1    Zerkle, A.L.2    Bonheyo, G.T.3    Fouke, B.W.4
  • 10
    • 31444441790 scopus 로고    scopus 로고
    • Genomics: Discovery in the dirt
    • Gewin, V. 2006. Genomics: discovery in the dirt. Nature 439:384-386.
    • (2006) Nature , vol.439 , pp. 384-386
    • Gewin, V.1
  • 11
    • 3042810205 scopus 로고    scopus 로고
    • Tropical Archaea: Diversity associated with the surface microlayer of corals
    • Kellogg, C. A. 2004. Tropical Archaea: diversity associated with the surface microlayer of corals. Mar. Ecol. Prog. Ser. 273:81-88.
    • (2004) Mar. Ecol. Prog. Ser , vol.273 , pp. 81-88
    • Kellogg, C.A.1
  • 12
    • 0022847664 scopus 로고
    • Applying metric and nonmetric multi-dimensional scaling to ecological studies: Some new results
    • Kenkel, N. C., and L. Orlóci. 1986. Applying metric and nonmetric multi-dimensional scaling to ecological studies: some new results. Ecology 67:919-928.
    • (1986) Ecology , vol.67 , pp. 919-928
    • Kenkel, N.C.1    Orlóci, L.2
  • 13
    • 34247846283 scopus 로고    scopus 로고
    • Coral microbial communities, zooxanthellae and mucus along gradients of seawater depth and coastal pollution
    • Klaus, J. S., I. Janse, J. M. Heikoop, R. A. Sanford, and B. W. Fouke. 2007. Coral microbial communities, zooxanthellae and mucus along gradients of seawater depth and coastal pollution. Environ. Microbiol. 9:1291-1305.
    • (2007) Environ. Microbiol , vol.9 , pp. 1291-1305
    • Klaus, J.S.1    Janse, I.2    Heikoop, J.M.3    Sanford, R.A.4    Fouke, B.W.5
  • 14
    • 0242709343 scopus 로고    scopus 로고
    • Multispecies microbial mutualisms on coral reefs: The host as a habitat
    • Knowlton, N., and F. Rohwer. 2003. Multispecies microbial mutualisms on coral reefs: the host as a habitat. Am. Nat. 162:S51-62.
    • (2003) Am. Nat , vol.162
    • Knowlton, N.1    Rohwer, F.2
  • 16
    • 33747354385 scopus 로고    scopus 로고
    • Bacteria associated with mucus and tissues of the coral Oculina patagonica in summer and winter
    • Koren, O., and E. Rosenberg. 2006. Bacteria associated with mucus and tissues of the coral Oculina patagonica in summer and winter. Appl. Environ. Microbiol. 72:5254-5259.
    • (2006) Appl. Environ. Microbiol , vol.72 , pp. 5254-5259
    • Koren, O.1    Rosenberg, E.2
  • 17
    • 64149087454 scopus 로고    scopus 로고
    • Diversities of coral-associated bacteria differ with location, but not species, for three acroporid corals on the Great Barrier Reef
    • Littman, R. A., B. L. Willis, C. Pfeffer, and D. G. Bourne. 2009. Diversities of coral-associated bacteria differ with location, but not species, for three acroporid corals on the Great Barrier Reef. FEMS Microbiol. Ecol. 68:152-163.
    • (2009) FEMS Microbiol. Ecol , vol.68 , pp. 152-163
    • Littman, R.A.1    Willis, B.L.2    Pfeffer, C.3    Bourne, D.G.4
  • 18
    • 22744437753 scopus 로고    scopus 로고
    • Microbial communities of coral surface mucopolysaccharide layers
    • E. Rosenberg and Y. Loya ed, Springer-Verlag, Berlin, Germany
    • Ritchie, K. B., and G. W. Smith. 2004. Microbial communities of coral surface mucopolysaccharide layers, p. 259-263. In E. Rosenberg and Y. Loya (ed.), Coral health and disease. Springer-Verlag, Berlin, Germany.
    • (2004) Coral health and disease , pp. 259-263
    • Ritchie, K.B.1    Smith, G.W.2
  • 19
    • 33750201132 scopus 로고    scopus 로고
    • Regulation of microbial populations by coral surface mucus and mucus-associated bacteria
    • Ritchie, K. B. 2006. Regulation of microbial populations by coral surface mucus and mucus-associated bacteria. Mar. Ecol. Prog. Ser. 322:1-14.
    • (2006) Mar. Ecol. Prog. Ser , vol.322 , pp. 1-14
    • Ritchie, K.B.1
  • 20
    • 0034890481 scopus 로고    scopus 로고
    • Diversity of bacteria associated with the Caribbean coral Montastraea franksi
    • Rohwer, F., M. Breitbart, J. Jara, F. Azam, and N. Knowlton. 2001. Diversity of bacteria associated with the Caribbean coral Montastraea franksi. Coral Reefs 20:7.
    • (2001) Coral Reefs , vol.20 , pp. 7
    • Rohwer, F.1    Breitbart, M.2    Jara, J.3    Azam, F.4    Knowlton, N.5
  • 22
    • 15444362001 scopus 로고    scopus 로고
    • Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
    • Schloss, P. D., and J. Handelsman. 2005. Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl. Environ. Microbiol. 71:1501-1506.
    • (2005) Appl. Environ. Microbiol , vol.71 , pp. 1501-1506
    • Schloss, P.D.1    Handelsman, J.2
  • 23
    • 33748785148 scopus 로고    scopus 로고
    • Microbial communities in the surface mucopolysaccharide layer and the black band microbial mat of black band-diseased Siderastrea siderea
    • Sekar, R., D. K. Mills, E. R. Remily, J. D. Voss, and L. L. Richardson. 2006. Microbial communities in the surface mucopolysaccharide layer and the black band microbial mat of black band-diseased Siderastrea siderea. Appl. Environ. Microbiol. 72:5963-5973.
    • (2006) Appl. Environ. Microbiol , vol.72 , pp. 5963-5973
    • Sekar, R.1    Mills, D.K.2    Remily, E.R.3    Voss, J.D.4    Richardson, L.L.5
  • 24
    • 0035463837 scopus 로고    scopus 로고
    • Quantitative comparisons of 16S rRNA gene sequence libraries from environmental samples
    • Singleton, D. R., M. A. Furlong, S. L. Rathbun, and W. B. Whitman. 2001. Quantitative comparisons of 16S rRNA gene sequence libraries from environmental samples. Appl. Environ. Microbiol. 67:4374-4376.
    • (2001) Appl. Environ. Microbiol , vol.67 , pp. 4374-4376
    • Singleton, D.R.1    Furlong, M.A.2    Rathbun, S.L.3    Whitman, W.B.4
  • 25
    • 0000595591 scopus 로고
    • Trophical role of bacteria in the ecosystem of the coral reef
    • Sorokin, Y. I. 1973. Trophical role of bacteria in the ecosystem of the coral reef. Nature 242:415-417.
    • (1973) Nature , vol.242 , pp. 415-417
    • Sorokin, Y.I.1
  • 26
    • 0038002843 scopus 로고    scopus 로고
    • Genetic variation of the scleractinian coral Stylophora pistillata, from western Pacific reefs
    • Takabayashi, M., D. A. Carter, J. V. Lopez, and O. Hoegh-Guldberg. 2003. Genetic variation of the scleractinian coral Stylophora pistillata, from western Pacific reefs. Coral Reefs 22:6.
    • (2003) Coral Reefs , vol.22 , pp. 6
    • Takabayashi, M.1    Carter, D.A.2    Lopez, J.V.3    Hoegh-Guldberg, O.4
  • 27
    • 34547781750 scopus 로고    scopus 로고
    • Tamura, K, J. Dudley, M. Nei, and S. Kumar. 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599
    • Tamura, K., J. Dudley, M. Nei, and S. Kumar. 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599.
  • 28
    • 0027299353 scopus 로고
    • Probing activated sludge with oligonucleotides specific for proteobacteria: Inadequacy of culture-dependent methods for describing microbial community structure
    • Wagner, M., R. Amann, H. Lemmer, and K. H. Schleifer. 1993. Probing activated sludge with oligonucleotides specific for proteobacteria: inadequacy of culture-dependent methods for describing microbial community structure. Appl. Environ. Microbiol. 59:1520-1525.
    • (1993) Appl. Environ. Microbiol , vol.59 , pp. 1520-1525
    • Wagner, M.1    Amann, R.2    Lemmer, H.3    Schleifer, K.H.4
  • 29
    • 33845641342 scopus 로고    scopus 로고
    • Bacterial community structure associated with the Antarctic soft coral, Alcyonium antarcticum
    • Webster, N. S., and D. Bourne. 2007. Bacterial community structure associated with the Antarctic soft coral, Alcyonium antarcticum. FEMS Microbiol. Ecol. 59:81-94.
    • (2007) FEMS Microbiol. Ecol , vol.59 , pp. 81-94
    • Webster, N.S.1    Bourne, D.2
  • 30
    • 35148876440 scopus 로고    scopus 로고
    • Metagenomic analysis of the microbial community associated with the coral Porites astreoides
    • Wegley, L., R. Edwards, B. Rodriguez-Brito, H. Liu, and F. Rohwer. 2007. Metagenomic analysis of the microbial community associated with the coral Porites astreoides. Environ. Microbiol. 9:2707-2719.
    • (2007) Environ. Microbiol , vol.9 , pp. 2707-2719
    • Wegley, L.1    Edwards, R.2    Rodriguez-Brito, B.3    Liu, H.4    Rohwer, F.5
  • 32
    • 0003634219 scopus 로고    scopus 로고
    • Chapter 2, Unit 2-4. Curr. Protocols Mol. Biol, John Wiley and Sons, New York, NY
    • Wilson, K. 2001. Preparation of genomic DNA from bacteria, Chapter 2, Unit 2-4. Curr. Protocols Mol. Biol., John Wiley and Sons, New York, NY.
    • (2001) Preparation of genomic DNA from bacteria
    • Wilson, K.1
  • 33
    • 33745118646 scopus 로고    scopus 로고
    • Whole-metagenome amplification of a microbial community associated with scleractinian coral by multiple displacement amplification using phi29 polymerase
    • Yokouchi, H., Y. Fukuoka, D. Mukoyama, R. Calugay, H. Takeyama, and T. Matsunaga. 2006. Whole-metagenome amplification of a microbial community associated with scleractinian coral by multiple displacement amplification using phi29 polymerase. Environ. Microbiol. 8:1155-1163.
    • (2006) Environ. Microbiol , vol.8 , pp. 1155-1163
    • Yokouchi, H.1    Fukuoka, Y.2    Mukoyama, D.3    Calugay, R.4    Takeyama, H.5    Matsunaga, T.6


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