Bacteria associated with mucus and tissues of the coral Oculina patagonica in summer and winter

Applied and Environmental Microbiology

Volumn 72, Issue 8, 2006, Pages 5254-5259

  Koren, Omry ^a   Rosenberg, Eugene ^a  

^a TEL AVIV UNIVERSITY   (Israel)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; CLONING; DNA; FUNGI; GENES; MICROBIOLOGY; RNA; TISSUE;

BACTERIA CULTURE; MARINE AGAR; MUCUS; SYBR GOLD STAINING;

WATER BACTERIOLOGY;

DNA; RNA 16S;

BACTERIUM; CORAL; GENETIC ANALYSIS; MUCUS; RELATIVE ABUNDANCE; SUMMER; WINTER;

ALPHAPROTEOBACTERIA; ARTICLE; BACTERIAL FLORA; BACTERIUM COLONY; BIODIVERSITY; BLEACHING; CENTRIFUGATION; CLONE; CONTROLLED STUDY; CORAL; DNA DETERMINATION; DNA LIBRARY; GENBANK; GENE SEQUENCE; MUCUS; NONHUMAN; NUCLEOTIDE SEQUENCE; OCULINA PATAGONICA; PSEUDOMONAS; SEASONAL VARIATION; SUMMER; TAXONOMIC IDENTIFICATION; VIBRIO; VIBRIO SPLENDIDUS; WINTER;

ANIMALS; ANTHOZOA; BACTERIA; CLONING, MOLECULAR; COLONY COUNT, MICROBIAL; DNA, BACTERIAL; GENE LIBRARY; MEDITERRANEAN SEA; MOLECULAR SEQUENCE DATA; MUCUS; PROTEOBACTERIA; RNA, RIBOSOMAL, 16S; SEASONS; SEQUENCE ANALYSIS, DNA;

ALPHAPROTEOBACTERIA; ANTHOZOA; BACTERIA (MICROORGANISMS); OCULINA PATAGONICA; PSEUDOMONAS SP.; VIBRIO; VIBRIO SPLENDIDUS;

EID: 33747354385     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.00554-06     Document Type: Article

References (28)

1. Acinas, S. G., L. Marcelino, V. Klepac-Ceraj, and M. F. Polz. 2004. Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons. J. Bacteriol. 186:2629-2635.
2. Altschul, S. F., W. Gish, W. Miller, E. W. Meyers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
3. Baker, A. 2004. Symbiont diversity on coral reefs and its relationship to bleaching resistance and resilience, p. 177-194. In E. Rosenherg and Y. Loya (ed.), Coral health and disease. Springer-Verlag, Berlin, Germany.
4. Banin, E., T. Israely, M. Fine, Y. Loya, and E. Rosenberg. 2001. Role of endosymbiotic zooxanthellae and coral mucus in the adhesion of the coral-bleaching pathogen Vibrio shiloi to its host. FEMS Microbiol. Lett. 199:33-37.
5. Banin, E., T. Israely, A. Kushmaro, Y. Loya, E. Orr, and E. Rosenberg. 2000. Penetration of the coral-bleaching bacterium Vibrio shiloi into Oculina patagonica. Appl. Environ. Microbiol. 66:3031-3036.
6. Banin, E., K. H. Sanjay, F. Naider, and E. Rosenberg. 2001. A proline-rich peptide from the coral pathogen Vibrio shiloi that inhibits photosynthesis of zooxanthellae. Appl. Environ. Microbiol. 67:1536-1541.
7. Bourne, D. G., and C. B. Munn. 2005. Diversity of bacteria associated with the coral Pocillopora damicornis from the Great Barrier Reef. Environ. Microbiol. 7:1162-1174.
8. Ducklow, H. W., and R. Mitchell. 1979. Bacterial populations and adaptations in the mucus layers of living corals. Limnol. Oceanogr. 24:715-725.
9. Fine, M., and Y. Loya. 2002. Endolithic algae: an alternative source of photoassimilates during coral bleaching. Proc. Biol. Sci. R. Soc. 269:1205-1210.
10. Fine, M., and Y. Loya. 2004. Coral bleaching in a temperate sea: from colony physiology to population ecology, p. 143-156. In E. Rosenberg and Y. Loya (ed.), Coral health and disease. Springer-Verlag, Berlin, Germany.
11. Israely, T., E. Banin, and E. Rosenberg. 2001. Growth, differentiation and death of Vibrio shiloi in coral tissue as a function of seawater temperature. Aquat. Microb. Ecol. 24:1-8.
12. 2, pH and light. Mar. Ecol. Prog. Ser. 117:159-172.
13. Kushmaro, A., Y. Loya, M. Fine, and E. Rosenberg. 1996. Bacterial infection and coral bleaching. Nature 380:396.
14. Kushmaro, A., E. Rosenberg, M. Fine, and Y. Loya. 1997. Bleaching of the coral Oculina patagonica by Vibrio AK-1. Mar. Ecol. Prog. Ser. 147:159-165.
15. Lane, D. J. 1991. 16S/23S rRNA sequencing. John Wiley & Sons, Chichester, United Kingdom.
16. Noble, R. T., and J. A. Fuhrman. 1998. Use of SYBR Green 1 for rapid epifluorescence counts of marine viruses and bacteria. Aquat. Microb. Ecol. 14:113-118.
17. Ritchie, K. B., and G. W. Smith. 1995. Preferential carbon utilization by surface bacterial communities from water mass, normal and white-band diseased Acropora cervicornis. Mol. Mar. Biol. Biotechnol. 4:345-352.
18. Ritchie, K. B., and G. W. Smith. 2004. Microbial communities of coral surface mucopolysaccharide layers, p. 259-264. In E. Rosenberg and Y. Loya (ed.). Coral health and disease. Springer-Verlag, Berlin, Germany.
19. Ritchie, K. B., J. H. Dennis, T. McGrath, and G. W. Smith. 1994. Bacteria associated with bleached and nonbleached areas of Monastrea annularis. Proc. Symp. Nat. Hist. Bahamas 5:75-80.
20. Rohwer, F., M. Breitbart, J. Jara, F. Azam, and K. Knowlton. 2001. Diversity of bacteria associated with the Caribbean coral Monastrea franksi. Coral Reefs 20:85-91.
21. Rohwer, F., V. Seguritan, F. Azam, and K. Knowlton. 2002. Diversity and distribution of coral-associated bacteria. Mar. Ecol. Prog. Ser. 243:1-10.
22. Rosenberg, E., and L. Falkowitz. 2004. The Vibrio shiloi/Oculina patagonica model system of coral bleaching. Annu. Rev. Microbiol. 8:143-159.
23. Schloss, P. D., and J. Handelsman. 2005. Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl. Environ. Microhiol. 71:1501-1506.
24. Sorokin, Y. I. 1973. Trophical role of bacteria in the ecosystem of the coral reef. Nature 242:415-417.
25. Thompson, J. R., S. Pacocha, C. Pharino, V. Klepac-Ceraj, D. E. Hunt, J. Benoit, R. Sarma-Rupavtarm, D. L. Distel, and M. F. Polz. 2005. Genotypic diversity within a natural coastal bacterioplankton population. Science 307: 1311-1313.
26. Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougín, und D. G. Higgins. 1997. The ClustalX Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24:4876-4882.
27. Toren, A., L. Landau, A. Kushmaro, Y. Loya, and E. Rosenherg. 1998. Effect of temperature on adhesion of Vibrio strain AK-1 to Oculina patagonica and on coral bleaching. Appl. Environ. Microbiol. 54:1379-1384.
28. Wegley, L., Y. Yu, M. Breitbart, V. Casas, D. I. Kline, and F. Rohwer. 2004. Coral-associated Archaea. Mar. Ecol. Prog. Ser. 273:89-96.