Glycoprofiling bifidobacterial consumption of galacto-oligosaccharides by mass spectrometry reveals strain-specific, preferential consumption of glycans

Applied and Environmental Microbiology

Volumn 75, Issue 23, 2009, Pages 7319-7325

  Barboza, Mariana ^a   Sela, David A ^a   Pirim, Claire ^a   LoCascio, Riccardo G ^a   Freeman, Samara L ^a,c   German, J Bruce ^a   Mills, David A ^a   Lebrilla, Carlito B ^a,b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY COLLEGE DUBLIN   (Ireland)

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTICAL METHOD; BACTERIAL FERMENTATIONS; BIFIDOBACTERIA; FERMENTATION MEDIA; FOOD INGREDIENTS; FOURIER TRANSFORM ION CYCLOTRON RESONANCE; GALACTO-OLIGOSACCHARIDES; GLYCANS; GROWTH CURVES; MATRIX-ASSISTED LASER DESORPTION IONIZATION; PREBIOTICS;

DESORPTION; FERMENTATION; GLUCOSE; MASS SPECTROMETERS; MASS SPECTROMETRY;

OLIGOSACCHARIDES;

GALACTOSE OLIGOSACCHARIDE;

ANALYTICAL METHOD; BACTERIUM; BIOTECHNOLOGY; CARBOHYDRATE; FERMENTATION; GROWTH CURVE; MASS SPECTROMETRY; MICROBIAL ACTIVITY; MICROBIAL COMMUNITY;

ARTICLE; BACTERIAL GROWTH; BACTERIAL METABOLISM; BACTERIAL STRAIN; BIFIDOBACTERIUM; BIFIDOBACTERIUM ADOLESCENTIS; BIFIDOBACTERIUM BREVE; BIFIDOBACTERIUM LONGUM INFANTIS; CARBOHYDRATE ANALYSIS; CARBOHYDRATE METABOLISM; CARBOHYDRATE SYNTHESIS; CHEMICAL COMPOSITION; CONTROLLED STUDY; FERMENTATION MEDIUM; GROWTH CURVE; ION CYCLOTRON RESONANCE MASS SPECTROMETRY; MATRIX ASSISTED LASER DESORPTION IONIZATION FOURIER TRANSFORM ION CYCLOTRON RESONANCE MASS SPECTROMETRY; NONHUMAN; SPECIES DIFFERENCE; STRAIN DIFFERENCE; SYRUP;

BIFIDOBACTERIUM; CULTURE MEDIA; FERMENTATION; OLIGOSACCHARIDES; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

BACTERIA (MICROORGANISMS);

EID: 72949102869     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00842-09     Document Type: Article

References (23)

1. Angus, F., S. Smart, and C. Shortt. 2005. Prebiotic ingredients with emphasis on galacto-oligosaccharides and fructooligosaccharides, p. 120-138. In A. Tamine (ed.), Probiotic dairy products. Blackwell Publishing Ltd., Oxford, United Kingdom.
2. Bruckner, R., and F. Titgemeyer. 2002. Carbon catabolite repression in bacteria: choice of the carbon source and autoregulatory limitation of sugar utilization. FEMS Microbiol. Lett. 209:141-148.
3. Casci, T., R. A. Rastal, and G. R. Gibson. 2007. Human gut microflora in health and disease: focus on probiotics, p. 402-434. In K. Shetty, G. Paliyath, A. L. Pometto, and R. E. Levin (ed.), Functional food and biotechnology. CRC Press, Taylor & Francis Group, Boca Raton, FL.
4. Dionex Corporation. 2003. Determination of trans-galactooligosaccharides in food by AOAC method 2001.02. Application note 155. Dionex Corporation, Sunnyvale, CA. www.dionex.com.
5. Dumortier, V., J. Montreuil, and S. Bouquelet. 1990. Primary structure of ten galactosides formed by transglycosylation during lactose hydrolysis by Bifidobacterium bifidum. Carbohydr Res. 201:115-123.
6. Hopkins, M. J., and G. T. Macfarlane. 2003. Nondigestible oligosaccharides enhance bacterial colonization resistance against Clostridium difficile in vitro. Appl. Environ. Microbiol. 69:1920-1927.
7. Kimura, K., K. Matsumoto, C. Ishihara, K. Harada, and A. Miyagi. 1995. Structure determination of galacto-oligosaccharides by pyridylamination and NMR spectroscopy. Carbohydr. Res. 270:33-42.
8. Lee, H. Y., M. J. Kimb, J. S. Baek, H. S. Lee, H. J. Cha, S. B. Lee, T. W. Moon, E. S. Seo, D. Kim, C. S. Park, and K. H. Park. 2003. Preparation and characterization of maltosyl-sucrose isomers produced by transglycosylation of maltogenic amylase from Bacillus stearothermophilus. J. Mol. Catal. B 26:293-305.
9. LoCascio, R. G., M. R. Ninonuevo, S. L. Freeman, D. A. Sela, R. Grimm, C. B. Lebrilla, D. A. Mills, and J. B. German. 2007. Glycoprofiling of bifidobacterial consumption of human milk oligosaccharides demonstrates strain specific, preferential consumption of small chain glycans secreted in early human lactation. J. Agric. Food Chem. 55:8914-8919.
10. LoCascio, R. G., M. R. Ninonuevo, S. R. Kronewitter, S. L. Freeman, J. B. German, C. B. Lebrilla, and D. A. Mills. 5 December 2008. A versatile and scalable strategy for glycoprofiling bifidobacterial consumption of human milk oligosaccharides. Microb. Biotechnol. doi:10.111/j.1751-7915.2008.000072.x.
11. Macfarlane, G. T., H. Steed, and S. Macfarlane. 2008. Bacterial metabolism and health-related effects of galactooligosaccharides and other prebiotics. J. Appl. Microbiol. 104:305-344.
12. Markowitz, V. M., and N. C. Kyrpides. 2007. Comparative genome analysis in the integrated microbial genomes (IMG) system. Methods Mol. Biol. 395:35-36.
13. Markowitz, V. M., E. Szeto, K. Palaniappan, Y. Grechkin, K. Chu, I. M. Chen, I. Dubchak, I. Anderson, A. Lykidis, K. Mavromatis, N. N. Ivanova, and N. C. Kyrpides. 2008. The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions. Nucleic Acids Res. 36: D528-D533.
14. Ninonuevo, M. R., R. E. Ward, R. G. LoCascio, J. B. German, S. L. Freeman, M. Barboza, D. A. Mills, and C. B. Lebrilla. 2007. Methods for the quantitation of human milk oligosaccharides in bacterial fermentation by mass spectrometry. Anal. Biochem. 361:15-23.
15. Rada, V., J. Nevoral, I. Trojanova, E. Tomankova, M. Smehilova, and J. Killer. 2008. Growth of infant faecal bifidobacteria and clostridia on prebiotic oligosaccharides in in vitro conditions. Anaerobe 14:205-208.
16. Sako, T., K. Matsumoto, and R. Tanaka. 1999. Recent progress on research and applications of non-digestable galactooligosaccharides. Int. Dairy J. 9:69-80.
17. Seipert, R. R., M. Barboza, M. R. Ninonuevo, R. G. LoCascio, D. A. Mills, S. L. Freeman, J. B. German, and C. B. Lebrilla. 2008. Analysis and quantitation of fructo-oligosaccharides using matrix-assisted laser desorption/ionization Fourier transform ion cyclotron resonance mass spectrometry. Anal. Chem. 80:159-165.
18. Sela, D. A., J. Chapman, A. Adeuya, J. H. Kim, F. Chen, T. R. Whitehead, A. Lapidus, D. S. Rokhsar, C. B. Lebrilla, J. B. German, N. P. Price, P. M. Richardson, and D. A. Mills. 2008. The complete genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome. Proc. Natl. Acad. Sci. USA 105:18964-18969.
19. Shoaf, K., G. L. Mulvey, G. D. Armstrong, and R. W. Hutkins. 2006. Prebiotic galactooligosaccharides reduce adherence of enteropathogenic Escherichia coli to tissue culture cells. Infect. Immun. 74:6920-6928.
20. Van Laere, K. M., T. Abee, H. A. Schols, G. Beldman, and A. G. Voragen. 2000. Characterization of a novel beta-galactosidase from Bifidobacterium adolescentis DSM 20083 active towards transgalactooligosaccharides. Appl. Environ. Microbiol. 66:1379-1384.
21. Watanuki, M., Y. Wada, and K. Matsumoto. 1996. Digestibility and physiological heat of combustion of β-1-6 galactooligosaccharides in vitro. Annu. Rep. Yakult Central Inst. Microbiol. Res. 16:1-12.
22. Xie, Y., and C. B. Lebrilla. 2003. Infrared multiphoton dissociation of alkali metal-coordinated oligosaccharides. Anal. Chem. 75:1590-1598.
23. Yanahira, S., T. Kobayashi, T. Suguri, M. Nakakoshi, S. Miura, H. Ishikawa, and I. Nakajima. 1995. Formation of oligosaccharides from lactose by Bacillus circulans beta-galactosidase. Biosci. Biotechnol. Biochem. 59:1021-1026.