메뉴 건너뛰기




Volumn 132, Issue 6, 2009, Pages 866-870

Differentiation of Fusarium from Aspergillus species by colorimetric in situ hybridization in formalin-fixed, paraffin-embedded tissue sections using dual fluorogenic-labeled LNA probes

Author keywords

Aspergillus; Fusarium; In situ hybridization; Ribosomal RNA; rRNA

Indexed keywords

DNA; FORMALDEHYDE; LOCKED NUCLEIC ACID; PARAFFIN; RIBOSOME RNA;

EID: 72949093139     PISSN: 00029173     EISSN: None     Source Type: Journal    
DOI: 10.1309/AJCPUBQ1QFRRX7MY     Document Type: Article
Times cited : (34)

References (32)
  • 1
    • 0027505613 scopus 로고    scopus 로고
    • Olsen GJ, Woese CR. Ribosomal RNA: a key to phylogeny. FASEB J. 1993;7:113-123.
    • Olsen GJ, Woese CR. Ribosomal RNA: a key to phylogeny. FASEB J. 1993;7:113-123.
  • 2
    • 0028055018 scopus 로고
    • The winds of (evolutionary) change: Breathing new life into microbiology
    • Olsen GJ, Woese CR, Overbeek R. The winds of (evolutionary) change: breathing new life into microbiology. J Bacteriol. 1994;176:1-6.
    • (1994) J Bacteriol , vol.176 , pp. 1-6
    • Olsen, G.J.1    Woese, C.R.2    Overbeek, R.3
  • 3
    • 0034911331 scopus 로고    scopus 로고
    • Applications of rRNA targeted oligonucleotide probes in biotechnology
    • Lipski A, Friedrich U, Altendorf K. Applications of rRNA targeted oligonucleotide probes in biotechnology. Appl Microbiol Biotechnol. 2001;56:40-57.
    • (2001) Appl Microbiol Biotechnol , vol.56 , pp. 40-57
    • Lipski, A.1    Friedrich, U.2    Altendorf, K.3
  • 4
    • 38549149739 scopus 로고    scopus 로고
    • Thermodynamics of DNA-RNA heteroduplex formation: Effects of locked nucleic acid nucleotides incorporated into the DNA strand
    • Kaur H, Wengel J, Maiti S. Thermodynamics of DNA-RNA heteroduplex formation: effects of locked nucleic acid nucleotides incorporated into the DNA strand. Biochemistry. 2008;47:1218-1227.
    • (2008) Biochemistry , vol.47 , pp. 1218-1227
    • Kaur, H.1    Wengel, J.2    Maiti, S.3
  • 5
    • 0036567147 scopus 로고    scopus 로고
    • Design of antisense oligonucleotides stabilized by locked nucleic acids
    • Kurreck J, Wyszko E, Gillen C, et al. Design of antisense oligonucleotides stabilized by locked nucleic acids. Nucleic Acids Res. 2002;30:1911-1918.
    • (2002) Nucleic Acids Res , vol.30 , pp. 1911-1918
    • Kurreck, J.1    Wyszko, E.2    Gillen, C.3
  • 6
    • 0032561794 scopus 로고    scopus 로고
    • LNA (locked nucleic acid): An RNA mimic forming exceedingly stable LNA:LNA duplexes
    • Koshkin AA, Nielsen P, Meldgaard M, et al. LNA (locked nucleic acid): an RNA mimic forming exceedingly stable LNA:LNA duplexes. J Am Chem Soc. 1998;120:13252-13253.
    • (1998) J Am Chem Soc , vol.120 , pp. 13252-13253
    • Koshkin, A.A.1    Nielsen, P.2    Meldgaard, M.3
  • 7
    • 42349093774 scopus 로고    scopus 로고
    • Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques
    • Amann R, Fuchs BM. Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques. Nat Rev Microbiol. 2008;6:339-348.
    • (2008) Nat Rev Microbiol , vol.6 , pp. 339-348
    • Amann, R.1    Fuchs, B.M.2
  • 8
    • 33747376356 scopus 로고    scopus 로고
    • Improved in situ hybridization efficiency with locked-nucleic-acid-incorporated DNA probes
    • Kubota K, Ohashi A, Imachi H, et al. Improved in situ hybridization efficiency with locked-nucleic-acid-incorporated DNA probes. Appl Environ Microbiol. 2006;72:5311-5317.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 5311-5317
    • Kubota, K.1    Ohashi, A.2    Imachi, H.3
  • 9
    • 74549138553 scopus 로고    scopus 로고
    • In situ detection of Aspergillus 18S ribosomal RNA sequences using a terminally biotinylated locked nucleic acid (LNA) probe
    • In press
    • Montone KT, Feldman MD. In situ detection of Aspergillus 18S ribosomal RNA sequences using a terminally biotinylated locked nucleic acid (LNA) probe. Diagn Mol Pathol. In press.
    • Diagn Mol Pathol
    • Montone, K.T.1    Feldman, M.D.2
  • 10
    • 0031962926 scopus 로고    scopus 로고
    • Morphologic criteria for the preliminary identification of Fusarium, Paecilomyces, and Acremonium species by histopathology
    • Liu K, Howell D, Perfect J, et al. Morphologic criteria for the preliminary identification of Fusarium, Paecilomyces, and Acremonium species by histopathology. Am J Clin Pathol. 1998;109:45-54.
    • (1998) Am J Clin Pathol , vol.109 , pp. 45-54
    • Liu, K.1    Howell, D.2    Perfect, J.3
  • 11
    • 72949115320 scopus 로고    scopus 로고
    • Chandler FW, Watts JC. Fusariosis. In: Pathologic Diagnosis of Fungal Infections. Chicago, IL: ASCP Press; 1987:81-84.
    • Chandler FW, Watts JC. Fusariosis. In: Pathologic Diagnosis of Fungal Infections. Chicago, IL: ASCP Press; 1987:81-84.
  • 12
    • 54049102484 scopus 로고    scopus 로고
    • Activities of antifungal agents against yeasts and filamentous fungi: Assessment according to the methodology of the European Committee on Antimicrobial Susceptibility Testing
    • Lass-Flörl C, Mayr A, Perkhofer S, et al. Activities of antifungal agents against yeasts and filamentous fungi: assessment according to the methodology of the European Committee on Antimicrobial Susceptibility Testing. Antimicrob Agents Chemother. 2008;52:3637-3641.
    • (2008) Antimicrob Agents Chemother , vol.52 , pp. 3637-3641
    • Lass-Flörl, C.1    Mayr, A.2    Perkhofer, S.3
  • 13
    • 0037287131 scopus 로고    scopus 로고
    • In situ hybridization for the differentiation of Aspergillus, Fusarium, and Pseudallescheria species in tissue section
    • Hayden RT, Isotalo PA, Parrett T, et al. In situ hybridization for the differentiation of Aspergillus, Fusarium, and Pseudallescheria species in tissue section. Diagn Mol Pathol. 2003;12:21-26.
    • (2003) Diagn Mol Pathol , vol.12 , pp. 21-26
    • Hayden, R.T.1    Isotalo, P.A.2    Parrett, T.3
  • 14
    • 0031471974 scopus 로고    scopus 로고
    • Detection of Aspergillus ribosomal RNA using biotinylated oligonucleotide probes
    • Park CS, Kim J, Montone KT. Detection of Aspergillus ribosomal RNA using biotinylated oligonucleotide probes. Diagn Mol Pathol. 1997;6:255-260.
    • (1997) Diagn Mol Pathol , vol.6 , pp. 255-260
    • Park, C.S.1    Kim, J.2    Montone, K.T.3
  • 15
    • 0026521590 scopus 로고
    • Colorimetric detection of herpes simplex virus by DNA in situ sandwich hybridization: A rapid, formamide-free, random oligomer-enhanced method
    • Iezzoni JC, Kang JH, Montone KT, et al. Colorimetric detection of herpes simplex virus by DNA in situ sandwich hybridization: a rapid, formamide-free, random oligomer-enhanced method. Nucleic Acids Res. 1992;20:1149-1150.
    • (1992) Nucleic Acids Res , vol.20 , pp. 1149-1150
    • Iezzoni, J.C.1    Kang, J.H.2    Montone, K.T.3
  • 16
    • 85008523748 scopus 로고
    • In situ hybridization for ribosomal RNA sequences: A rapid sensitive method for diagnosis of infectious pathogens in anatomic pathology substrates
    • Montone KT. In situ hybridization for ribosomal RNA sequences: a rapid sensitive method for diagnosis of infectious pathogens in anatomic pathology substrates. Acta Histochem Cytochem. 1994;27:601-606.
    • (1994) Acta Histochem Cytochem , vol.27 , pp. 601-606
    • Montone, K.T.1
  • 17
    • 0026321330 scopus 로고
    • Automated molecular pathology: One hour in situ DNA hybridization
    • Park CS, Manahan LJ, Brigati DJ. Automated molecular pathology: one hour in situ DNA hybridization. J Histotechnol. 1991;14:219-229.
    • (1991) J Histotechnol , vol.14 , pp. 219-229
    • Park, C.S.1    Manahan, L.J.2    Brigati, D.J.3
  • 18
    • 35448960891 scopus 로고    scopus 로고
    • Fusarium infections in immunocompromised patients
    • Nucci M, Anaissie E. Fusarium infections in immunocompromised patients. Clin Microbiol Rev. 2007;20:695-704.
    • (2007) Clin Microbiol Rev , vol.20 , pp. 695-704
    • Nucci, M.1    Anaissie, E.2
  • 19
    • 62449329439 scopus 로고    scopus 로고
    • Challenges and pitfalls of morphologic identification of fungal infections in histologic and cytologic specimens
    • Sangoi AR, Rogers WM, Longacre TA, et al. Challenges and pitfalls of morphologic identification of fungal infections in histologic and cytologic specimens. Am J Clin Pathol. 2009;131:364-375.
    • (2009) Am J Clin Pathol , vol.131 , pp. 364-375
    • Sangoi, A.R.1    Rogers, W.M.2    Longacre, T.A.3
  • 20
    • 0025165458 scopus 로고
    • A novel diagnostic method of Pneumocystis carinii: In situ hybridization of ribosomal ribonucleic acid with biotinylated oligonucleotide probes
    • Hayashi Y, Watanabe J, Nakata K, et al. A novel diagnostic method of Pneumocystis carinii: in situ hybridization of ribosomal ribonucleic acid with biotinylated oligonucleotide probes. Lab Invest. 1990;63:576-580.
    • (1990) Lab Invest , vol.63 , pp. 576-580
    • Hayashi, Y.1    Watanabe, J.2    Nakata, K.3
  • 21
    • 0028796309 scopus 로고
    • Rapid method for detection of Aspergillus 5S ribosomal RNA using a genus-specific oligonucleotide probe
    • Montone KT, Litzky LA. Rapid method for detection of Aspergillus 5S ribosomal RNA using a genus-specific oligonucleotide probe. Am J Clin Pathol. 1995;103:48-51.
    • (1995) Am J Clin Pathol , vol.103 , pp. 48-51
    • Montone, K.T.1    Litzky, L.A.2
  • 22
    • 9544235286 scopus 로고    scopus 로고
    • Simple detection of the 5S ribosomal RNA of Pneumocystis carinii using in situ hybridization
    • Kobayashi M, Urata T, Ikezoe T, et al. Simple detection of the 5S ribosomal RNA of Pneumocystis carinii using in situ hybridization. J Clin Pathol. 1996;49:712-716.
    • (1996) J Clin Pathol , vol.49 , pp. 712-716
    • Kobayashi, M.1    Urata, T.2    Ikezoe, T.3
  • 23
    • 0036114345 scopus 로고    scopus 로고
    • In situ hybridization for the identification of filamentous fungi in tissue section
    • Hayden RT, Qian X, Procop GW, et al. In situ hybridization for the identification of filamentous fungi in tissue section. Diagn Mol Pathol. 2002;11:119-126.
    • (2002) Diagn Mol Pathol , vol.11 , pp. 119-126
    • Hayden, R.T.1    Qian, X.2    Procop, G.W.3
  • 24
    • 0035119841 scopus 로고    scopus 로고
    • In situ hybridization for the identification of yeastlike organisms in tissue section
    • Hayden RT, Qian X, Roberts GD, et al. In situ hybridization for the identification of yeastlike organisms in tissue section. Diagn Mol Pathol. 2001;10:15-23.
    • (2001) Diagn Mol Pathol , vol.10 , pp. 15-23
    • Hayden, R.T.1    Qian, X.2    Roberts, G.D.3
  • 25
    • 31344454565 scopus 로고    scopus 로고
    • In situ detection of miRNAs in animal embryos using LNA-modified oligonucleotide probes
    • Kloosterman WP, Wienholds E, de Bruijn E, et al. In situ detection of miRNAs in animal embryos using LNA-modified oligonucleotide probes. Nat Methods. 2006;3:27-29.
    • (2006) Nat Methods , vol.3 , pp. 27-29
    • Kloosterman, W.P.1    Wienholds, E.2    de Bruijn, E.3
  • 26
    • 27144525471 scopus 로고    scopus 로고
    • Dramatically improved RNA in situ hybridization signals using LNA-modified probes
    • Thomsen R, Nielsen PS, Jensen TH. Dramatically improved RNA in situ hybridization signals using LNA-modified probes. RNA. 2005;11:1745-1748.
    • (2005) RNA , vol.11 , pp. 1745-1748
    • Thomsen, R.1    Nielsen, P.S.2    Jensen, T.H.3
  • 27
    • 0031038674 scopus 로고    scopus 로고
    • The use of immunohistochemistry to improve sensitivity and specificity in the diagnosis of systemic mycosis in patients with haematological malignancies
    • Jensen HE, Salonen J, Ekfors TO. The use of immunohistochemistry to improve sensitivity and specificity in the diagnosis of systemic mycosis in patients with haematological malignancies. J Pathol. 1997;181:100-105.
    • (1997) J Pathol , vol.181 , pp. 100-105
    • Jensen, H.E.1    Salonen, J.2    Ekfors, T.O.3
  • 28
    • 0027214071 scopus 로고
    • Immunomycology: Rapid and specific immunocytochemical identification of fungi in formalin-fixed, paraffin-embedded material
    • Reed JA, Hemann BA, Alexander JL, et al. Immunomycology: rapid and specific immunocytochemical identification of fungi in formalin-fixed, paraffin-embedded material. J Histochem Cytochem. 1993;41:1217-1221.
    • (1993) J Histochem Cytochem , vol.41 , pp. 1217-1221
    • Reed, J.A.1    Hemann, B.A.2    Alexander, J.L.3
  • 29
    • 0029797064 scopus 로고    scopus 로고
    • Immunoperoxidase staining for identification of Aspergillus species in routinely processed tissue sections
    • Verweij PE, Smedts F, Poot T, et al. Immunoperoxidase staining for identification of Aspergillus species in routinely processed tissue sections. J Clin Pathol. 2001;49:798-801.
    • (2001) J Clin Pathol , vol.49 , pp. 798-801
    • Verweij, P.E.1    Smedts, F.2    Poot, T.3
  • 30
    • 0347761226 scopus 로고    scopus 로고
    • Immunohistochemical detection of Aspergillus species in pediatric tissue samples
    • Choi JK, Mauger J, McGowan K. Immunohistochemical detection of Aspergillus species in pediatric tissue samples. Am J Clin Pathol. 2004;121:18-25.
    • (2004) Am J Clin Pathol , vol.121 , pp. 18-25
    • Choi, J.K.1    Mauger, J.2    McGowan, K.3
  • 31
    • 0035662849 scopus 로고    scopus 로고
    • An immunohistochemical method that differentiates Cryptococcus neoformans varieties and serotypes in formalin-fixed paraffin-embedded tissues
    • Krockenberger MB, Canfield PJ, Kozel TR, et al. An immunohistochemical method that differentiates Cryptococcus neoformans varieties and serotypes in formalin-fixed paraffin-embedded tissues. Med Mycol. 2001;39:523-533.
    • (2001) Med Mycol , vol.39 , pp. 523-533
    • Krockenberger, M.B.1    Canfield, P.J.2    Kozel, T.R.3
  • 32
    • 0032617045 scopus 로고    scopus 로고
    • Disseminated Fusarium infection identified by the immunohistochemical staining in a patient with a refractory leukemia
    • Saito T, Imaizumi M, Kudo K, et al. Disseminated Fusarium infection identified by the immunohistochemical staining in a patient with a refractory leukemia. Tohoku J Exp Med. 1999;187:71-77.
    • (1999) Tohoku J Exp Med , vol.187 , pp. 71-77
    • Saito, T.1    Imaizumi, M.2    Kudo, K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.