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Volumn 43, Issue 43, 2004, Pages 13621-13627

Effects of the C4′-oxidized abasic site on replication in Escherichia coli. An unusually large deletion is induced by a small lesion

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTICS; BIOCHEMISTRY; DNA; OXIDATION; STRESS ANALYSIS; TUMORS;

EID: 7244236323     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi048337r     Document Type: Article
Times cited : (27)

References (35)
  • 1
    • 0348140585 scopus 로고    scopus 로고
    • Abasic Sites in DNA: Repair and Biological Consequences in Saccharomyces cerevisiae
    • Boiteux, S., and Guillet, M. (2004) Abasic Sites in DNA: Repair and Biological Consequences in Saccharomyces cerevisiae, DNA Repair 3, 1-12.
    • (2004) DNA Repair , vol.3 , pp. 1-12
    • Boiteux, S.1    Guillet, M.2
  • 2
    • 0035837587 scopus 로고    scopus 로고
    • The Major Human Abasic Endonuclease: Formation, Consequences and Repair of Abasic Lesions in DNA
    • Wilson, D. M. I., and Barsky, D. (2001) The Major Human Abasic Endonuclease: Formation, Consequences and Repair of Abasic Lesions in DNA, Mutat. Res. 485, 283-307.
    • (2001) Mutat. Res. , vol.485 , pp. 283-307
    • Wilson, D.M.I.1    Barsky, D.2
  • 3
    • 0023015325 scopus 로고
    • Mutagenesis by Apurinic/Apyrimidinic Sites
    • Loeb, L. A., and Preston, B. D. (1986) Mutagenesis by Apurinic/Apyrimidinic Sites, Annu. Rev. Genet. 20, 201-230.
    • (1986) Annu. Rev. Genet. , vol.20 , pp. 201-230
    • Loeb, L.A.1    Preston, B.D.2
  • 4
    • 2542545190 scopus 로고    scopus 로고
    • Mutagenic Effects of 2-Deoxyribonolactone in Escherichia coli. An Abasic Lesion That Disobeys the A-Rule
    • Kroeger, K. M., Jiang, Y. L., Kow, Y. W., Goodman, M. F., and Greenberg, M. M. (2004) Mutagenic Effects of 2-Deoxyribonolactone in Escherichia coli. An Abasic Lesion That Disobeys the A-Rule, Biochemistry 43, 6723-6733.
    • (2004) Biochemistry , vol.43 , pp. 6723-6733
    • Kroeger, K.M.1    Jiang, Y.L.2    Kow, Y.W.3    Goodman, M.F.4    Greenberg, M.M.5
  • 5
    • 0034830066 scopus 로고    scopus 로고
    • The 2-Deoxyribonolactone Lesion Produced in DNA by Neocarzinostatin and Other DNA Damaging Agents Forms Cross-links with the Base-Excision Repair Enzyme Endonuclease III
    • Hashimoto, M., Greenberg, M. M., Kow, Y. W., Hwang, J.-T., and Cunningham, R. P. (2001) The 2-Deoxyribonolactone Lesion Produced in DNA by Neocarzinostatin and Other DNA Damaging Agents Forms Cross-links with the Base-Excision Repair Enzyme Endonuclease III, J. Am. Chem. Soc. 123, 3161-3162.
    • (2001) J. Am. Chem. Soc. , vol.123 , pp. 3161-3162
    • Hashimoto, M.1    Greenberg, M.M.2    Kow, Y.W.3    Hwang, J.-T.4    Cunningham, R.P.5
  • 6
    • 0035393753 scopus 로고    scopus 로고
    • Translesional Synthesis on DNA Templates Containing the 2′-Deoxyribonolactone Lesion
    • Berthet, N., Roupioz, Y., Constant, J. F., Kotera, M., and Lhomme, J. (2001) Translesional Synthesis on DNA Templates Containing the 2′-Deoxyribonolactone Lesion, Nucleic Acids Res. 29, 2725-2732.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 2725-2732
    • Berthet, N.1    Roupioz, Y.2    Constant, J.F.3    Kotera, M.4    Lhomme, J.5
  • 7
    • 33748719327 scopus 로고
    • Mechanisms of Bleomycin-Induced DNA Degradation
    • Stubbe, J., and Kozarich, J. W. (1987) Mechanisms of Bleomycin-Induced DNA Degradation, Chem. Rev. 87, 1107-1136.
    • (1987) Chem. Rev. , vol.87 , pp. 1107-1136
    • Stubbe, J.1    Kozarich, J.W.2
  • 10
    • 0028274695 scopus 로고
    • Theoretical Study on the Deoxyribose Radicals Formed by Hydrogen Abstraction
    • Miaskiewicz, K., and Osman, R. (1994) Theoretical Study on the Deoxyribose Radicals Formed by Hydrogen Abstraction, J. Am. Chem. Soc. 116, 232-238.
    • (1994) J. Am. Chem. Soc. , vol.116 , pp. 232-238
    • Miaskiewicz, K.1    Osman, R.2
  • 11
    • 0029140468 scopus 로고
    • 5 System Results from a Cytochrome P-450-Type Hydroxylation Reaction
    • 5 System Results from a Cytochrome P-450-Type Hydroxylation Reaction, J. Am. Chem. Soc. 117, 2935-2936.
    • (1995) J. Am. Chem. Soc. , vol.117 , pp. 2935-2936
    • Pitié, M.1    Bernadou, J.2    Meunier, B.3
  • 12
    • 0025035579 scopus 로고
    • Identification of the Source of Oxygen in the Alkaline-Labile Product Accompanying Cytosine Release during Bleomycin-Mediated Oxidative Degradation of d(CGCGCG)
    • Rabow, L. E., McGall, G. H., Stubbe, J., and Kozarich, J. W. (1990) Identification of the Source of Oxygen in the Alkaline-Labile Product Accompanying Cytosine Release During Bleomycin-Mediated Oxidative Degradation of d(CGCGCG), J. Am. Chem. Soc. 112, 3203-3208.
    • (1990) J. Am. Chem. Soc. , vol.112 , pp. 3203-3208
    • Rabow, L.E.1    McGall, G.H.2    Stubbe, J.3    Kozarich, J.W.4
  • 13
    • 0023583665 scopus 로고
    • A Role for Oxidative DNA Sugar Damage in Mutagenesis by Neocarzinostatin and Bleomycin
    • Povirk, L. F., and Goldberg, I. H. (1987) A Role for Oxidative DNA Sugar Damage in Mutagenesis by Neocarzinostatin and Bleomycin, Biochimie 69, 815-823.
    • (1987) Biochimie , vol.69 , pp. 815-823
    • Povirk, L.F.1    Goldberg, I.H.2
  • 14
    • 0000820621 scopus 로고
    • Spontaneous and Mutagen-Induced Deletions: Mechanistic Studies in Salmonella Tester Strain TA102
    • Levin, D. E., Marnett, L. J., and Ames, B. N. (1984) Spontaneous and Mutagen-Induced Deletions: Mechanistic Studies in Salmonella Tester Strain TA102, Proc. Natl. Acad. Sci. U.S.A. 81, 4457-4461.
    • (1984) Proc. Natl. Acad. Sci. U.S.A. , vol.81 , pp. 4457-4461
    • Levin, D.E.1    Marnett, L.J.2    Ames, B.N.3
  • 15
    • 0033214484 scopus 로고    scopus 로고
    • Context-dependent Mutagenesis by DNA Lesions
    • Delaney, J. C., and Essigmann, J. M. (1999) Context-dependent Mutagenesis by DNA Lesions, Chem. Biol. 6, 743-753.
    • (1999) Chem. Biol. , vol.6 , pp. 743-753
    • Delaney, J.C.1    Essigmann, J.M.2
  • 16
    • 0037440169 scopus 로고    scopus 로고
    • Mutagenic Potentials of Damaged Nucleic Acids Produced by Reactive Oxygen/Nitrogen Species: Approaches Using Synthetic Oligonucleotides and Nucleotides
    • Kamiya, H. (2003) Mutagenic Potentials of Damaged Nucleic Acids Produced by Reactive Oxygen/Nitrogen Species: Approaches Using Synthetic Oligonucleotides and Nucleotides, Nucleic Acids Res. 31, 517-531.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 517-531
    • Kamiya, H.1
  • 17
    • 0026111317 scopus 로고
    • The "A Rule" of Mutagen Specificity: A Consequence of DNA Polymerase Bypass of Non-Instructional Lesions?
    • Strauss, B. S. (1991) The "A Rule" of Mutagen Specificity: A Consequence of DNA Polymerase Bypass of Non-Instructional Lesions? BioEssays 13, 79-84.
    • (1991) BioEssays , vol.13 , pp. 79-84
    • Strauss, B.S.1
  • 18
    • 1542297706 scopus 로고    scopus 로고
    • In Vitro Effects of a C4′-Oxidized Abasic Site on DNA Polymerases
    • Greenberg, M. M., Weledji, Y. N., Kroeger, K. M., Kim, J., and Goodman, M. F. (2004) In Vitro Effects of a C4′-Oxidized Abasic Site on DNA Polymerases, Biochemistry 43, 2656-2663.
    • (2004) Biochemistry , vol.43 , pp. 2656-2663
    • Greenberg, M.M.1    Weledji, Y.N.2    Kroeger, K.M.3    Kim, J.4    Goodman, M.F.5
  • 19
    • 0348050485 scopus 로고    scopus 로고
    • Synthesis and Characterization of Oligonucleotides Containing the C4′-Oxidized Abasic Site Produced by Bleomycin and Other DNA Damaging Agents
    • Kim, J., Gil, J. M., and Greenberg, M. M. (2003) Synthesis and Characterization of Oligonucleotides Containing the C4′-Oxidized Abasic Site Produced by Bleomycin and Other DNA Damaging Agents, Angew. Chem., Int. Ed. 42, 5882-5885.
    • (2003) Angew. Chem., Int. Ed. , vol.42 , pp. 5882-5885
    • Kim, J.1    Gil, J.M.2    Greenberg, M.M.3
  • 20
    • 0033805312 scopus 로고    scopus 로고
    • A New Method for the Postsynthetic Generation of Abasic Sites in Oligomeric DNA
    • Shishkina, I. G., and Johnson, F. (2000) A New Method for the Postsynthetic Generation of Abasic Sites in Oligomeric DNA, Chem. Res. Toxicol. 13, 907-912.
    • (2000) Chem. Res. Toxicol. , vol.13 , pp. 907-912
    • Shishkina, I.G.1    Johnson, F.2
  • 21
    • 0032546530 scopus 로고    scopus 로고
    • Thermodynamic Consequences of an Abasic Lesion in Duplex DNA are Strongly Dependent on Base Sequence
    • Gelfand, C. A., Plum, G. E., Grollman, A. P., Johnson, F., and Breslauer, K. J. (1998) Thermodynamic Consequences of an Abasic Lesion in Duplex DNA are Strongly Dependent on Base Sequence, Biochemistry 37, 7321-7327.
    • (1998) Biochemistry , vol.37 , pp. 7321-7327
    • Gelfand, C.A.1    Plum, G.E.2    Grollman, A.P.3    Johnson, F.4    Breslauer, K.J.5
  • 22
    • 0034669125 scopus 로고    scopus 로고
    • All Three SOS-inducible DNA Polymerases (Pol II, Pol IV and Pol V) Are Involved in Induced Mutagenesis
    • Napolitano, R., Janel-Bintz, R., Wagner, J., and Fuchs, R. P. P. (2000) All Three SOS-inducible DNA Polymerases (Pol II, Pol IV and Pol V) Are Involved in Induced Mutagenesis. EMBO J. 19, 6259-6265.
    • (2000) EMBO J. , vol.19 , pp. 6259-6265
    • Napolitano, R.1    Janel-Bintz, R.2    Wagner, J.3    Fuchs, R.P.P.4
  • 23
    • 0034720286 scopus 로고    scopus 로고
    • Roles of E. coli DNA Polymerases IV and V in Lesion-Targeted and Untargeted SOS Mutagenesis
    • Tang, M., Pham, P., Shen, X., Taylor, J. S., O'Donnell, M., Woodgate, R., and Goodman, M. F. (2000) Roles of E. coli DNA Polymerases IV and V in Lesion-Targeted and Untargeted SOS Mutagenesis, Nature 404, 1014-1018.
    • (2000) Nature , vol.404 , pp. 1014-1018
    • Tang, M.1    Pham, P.2    Shen, X.3    Taylor, J.S.4    O'Donnell, M.5    Woodgate, R.6    Goodman, M.F.7
  • 24
    • 0025375829 scopus 로고
    • Mutation Frequency and Spectrum Resulting from a Single Abasic Site in a Single Stranded Vector
    • Lawrence, C. W., Borden, A., Banerjee, S. K., and LeClerc, J. E. (1990) Mutation Frequency and Spectrum Resulting From a Single Abasic Site in a Single Stranded Vector, Nucleic Acids Res. 18, 2153-2157.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 2153-2157
    • Lawrence, C.W.1    Borden, A.2    Banerjee, S.K.3    LeClerc, J.E.4
  • 25
    • 0035997351 scopus 로고    scopus 로고
    • Active Site Tightness and Substrate Fit in DNA Replication
    • Kool, E. T. (2002) Active Site Tightness and Substrate Fit in DNA Replication, Annu. Rev. Biochem. 71, 191-219.
    • (2002) Annu. Rev. Biochem. , vol.71 , pp. 191-219
    • Kool, E.T.1
  • 27
    • 0035902560 scopus 로고    scopus 로고
    • Roles of DNA Polymerases V and II in SOS-Induced Error-prone and Error-free Repair in Escherichia coli
    • Pham, P., Rangarajan, S., Woodgate, R., and Goodman, M. F. (2001) Roles of DNA Polymerases V and II in SOS-Induced Error-prone and Error-free Repair in Escherichia coli, Proc. Natl. Acad. Sci. U.S.A. 98, 8350-8354.
    • (2001) Proc. Natl. Acad. Sci. U.S.A. , vol.98 , pp. 8350-8354
    • Pham, P.1    Rangarajan, S.2    Woodgate, R.3    Goodman, M.F.4
  • 28
    • 0242362731 scopus 로고    scopus 로고
    • Analysis of Translesion Replication Across an Abasic Site by DNA Polymerase IV of Escherichia coli
    • Maor-Shoshani, A., Hayashi, K., Ohmori, H., and Livneh, Z. (2003) Analysis of Translesion Replication Across an Abasic Site by DNA Polymerase IV of Escherichia coli, DNA Repair 2, 1227-1238.
    • (2003) DNA Repair , vol.2 , pp. 1227-1238
    • Maor-Shoshani, A.1    Hayashi, K.2    Ohmori, H.3    Livneh, Z.4
  • 29
    • 0030971099 scopus 로고    scopus 로고
    • Translesional Synthesis on DNA Templates Containing a Single Abasic Site
    • Shibutani, S., Takeshita, M., and Grollman, A. P. (1997) Translesional Synthesis on DNA Templates Containing a Single Abasic Site, J. Biol. Chem. 272, 13916-13922.
    • (1997) J. Biol. Chem. , vol.272 , pp. 13916-13922
    • Shibutani, S.1    Takeshita, M.2    Grollman, A.P.3
  • 30
    • 0030818757 scopus 로고    scopus 로고
    • Replication of Template-Primers Containing Propanodeoxyguanosine by DNA Polymerase β. Induction of Base Pair Substitution and Frameshift Mutations by Template Slippage and Deoxynucleoside Triphosphate Stabilization
    • Hashim, M. F., Schnetz-Boutaud, N., and Marnett, L. J. (1997) Replication of Template-Primers Containing Propanodeoxyguanosine by DNA Polymerase β. Induction of Base Pair Substitution and Frameshift Mutations by Template Slippage and Deoxynucleoside Triphosphate Stabilization, J. Biol. Chem. 272, 20205-20212.
    • (1997) J. Biol. Chem. , vol.272 , pp. 20205-20212
    • Hashim, M.F.1    Schnetz-Boutaud, N.2    Marnett, L.J.3
  • 31
    • 0035902484 scopus 로고    scopus 로고
    • Mechanism of DNA Polymerase II-Mediated Frameshift Mutagenesis
    • Becherel, O. J., and Fuchs, R. P. P. (2001) Mechanism of DNA Polymerase II-Mediated Frameshift Mutagenesis, Proc. Natl. Acad. Sci. U.S.A. 98, 8566-8571.
    • (2001) Proc. Natl. Acad. Sci. U.S.A. , vol.98 , pp. 8566-8571
    • Becherel, O.J.1    Fuchs, R.P.P.2
  • 32
    • 0031038053 scopus 로고    scopus 로고
    • Abasic Translesion Synthesis by DNA Polymerase β Violates the "A-rule"
    • Efrati, E., Tocco, G., Eritja, R., Wilson, S. H., and Goodman, M. F. (1997) Abasic Translesion Synthesis by DNA Polymerase β Violates the "A-rule", J. Biol. Chem. 272, 2559-2569.
    • (1997) J. Biol. Chem. , vol.272 , pp. 2559-2569
    • Efrati, E.1    Tocco, G.2    Eritja, R.3    Wilson, S.H.4    Goodman, M.F.5
  • 33
    • 1642382214 scopus 로고    scopus 로고
    • Snapshots of Replication Through an Abasic Lesion: Structural Basis for Base Substitutions and Frameshifts
    • Ling, H., Boudsocq, F., Woodgate, R., and Yang, W. (2004) Snapshots of Replication Through an Abasic Lesion: Structural Basis for Base Substitutions and Frameshifts, Mol. Cell 13, 751-762.
    • (2004) Mol. Cell , vol.13 , pp. 751-762
    • Ling, H.1    Boudsocq, F.2    Woodgate, R.3    Yang, W.4
  • 34
    • 0037119490 scopus 로고    scopus 로고
    • A Novel Single Amino Acid Deletion Caspase-8 Mutant in Cancer Cells that Lost Proapoptotic Activity
    • Liu, B., Peng, D., Lu, Y., Jin, W., and Fan, Z. (2002) A Novel Single Amino Acid Deletion Caspase-8 Mutant in Cancer Cells that Lost Proapoptotic Activity, J. Biol. Chem. 277, 30159-30164.
    • (2002) J. Biol. Chem. , vol.277 , pp. 30159-30164
    • Liu, B.1    Peng, D.2    Lu, Y.3    Jin, W.4    Fan, Z.5
  • 35
    • 0034964727 scopus 로고    scopus 로고
    • Single-Amino-Acid Deletion in the RYR1 Gene, Associated with Malignant Hyperthermia Susceptibility and Unusual Contraction Phenotype
    • Sambuughin, N., McWilliams, S., De Bantel, A., Sivakumar, K., and Nelson, T. E. (2001) Single-Amino-Acid Deletion in the RYR1 Gene, Associated With Malignant Hyperthermia Susceptibility and Unusual Contraction Phenotype, Am. J. Hum. Genet. 69, 204-208.
    • (2001) Am. J. Hum. Genet. , vol.69 , pp. 204-208
    • Sambuughin, N.1    McWilliams, S.2    De Bantel, A.3    Sivakumar, K.4    Nelson, T.E.5


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