Herbidospora osyris sp. nov., isolated from surfacesterilized tissue of Osyris wightiana Wall. ex Wight

International Journal of Systematic and Evolutionary Microbiology

Volumn 59, Issue 12, 2009, Pages 3123-3127

  Li, Jie ^a,c   Zhao, Guo Zhen ^a,c   Qin, Sheng ^a,c   Zhu, Wen Yong ^a,c   Xu, Li Hua ^a,c   Li, Wen Jun ^a,b,c  

^a BEIJING UNIVERSITY OF POSTS AND TELECOMMUNICATIONS   (China)

^b SOUTH CHINA SEA INSTITUTE OF OCEANOLOGY   (China)

^c YUNNAN UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

ACTINOBACTERIA; ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; CHEMOTAXONOMY; CHINA; DNA DNA HYBRIDIZATION; FATTY ACID ANALYSIS; HERBIDOSPORA OSYRIS; NONHUMAN; NUCLEOTIDE SEQUENCE; OSYRIS WIGHTIANA; PHENOTYPE; PHYLOGENY; PLANT; PRIORITY JOURNAL; RNA SEQUENCE;

ACTINOMYCETALES; CHINA; DNA, BACTERIAL; DNA, RIBOSOMAL; FATTY ACIDS; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SANTALACEAE;

HERBIDOSPORA; HERBIDOSPORA CRETACEA; OSYRIS; OSYRIS WIGHTIANA;

EID: 72149134498     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.010579-0     Document Type: Article

References (26)

1. Collins, M. D. & Jones, D. (1980). Lipids in the classification and identification of coryneform bacteria containing peptidoglycans based on 2,4-diaminobutyric acid. J Appl Bacteriol 48, 459-470.
2. Collins, M. D., Pirouz, T., Goodfellow, M. & Minnikin, D. E. (1977). Distribution of menaquinones in actinomycetes and corynebacteria. J Gen Microbiol 100, 221-230.
3. Dong, X.-Z. & Cai, M.-Y. (editors) (2001). Determination of biochemical properties. In Manual for the Systematic Identification of General Bacteria, pp. 370-398. Beijing: Science Press (in Chinese).
4. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
5. Goodfellow, M. (1971). Numerical taxonomy of some nocardioform bacteria. J Gen Microbiol 69, 33-80.
6. Gordon, R. E., Barnett, D. A., Handerhan, J. E. & Pang, C. H.-N. (1974). Nocardia coeliaca, Nocardia autotrophica, and the nocardin strain. Int J Syst Bacteriol 24, 54-63.
7. He, L., Li, W., Huang, Y., Wang, L. M., Liu, Z. H., Lanoot, B. J., Vancanneyt, M. & Swings, J. (2005). Streptomyces jietaisiensis sp. nov., isolated from soil in northern China. Int J Syst Evol Microbiol 55, 1939-1944.
8. Kelly, K. L. (1964). Inter-Society Color Council - National Bureau of Standards Color-Name Charts Illustrated with Centroid Colors. Washington, DC: US Government Printing Office.
9. Kudo, T., Itoh, T., Miyadoh, S., Shomura, T. & Seino, A. (1993). Herbidospora gen. nov., a new genus of the family Streptosporangiaceae Goodfellow et al. 1990. Int J Syst Bacteriol 43, 319-328.
10. Lechevalier, M. P., De Bièvre, C. & Lechevalier, H. A. (1977). Chemotaxonomy of aerobic actinomycetes: phospholipid composition. Biochem Syst Ecol 5, 249-260.
11. Li, W. J., Xu, P., Schumann, P., Zhang, Y. Q., Pukall, R., Xu, L. H., Stackebrandt, E. & Jiang, C. L. (2007). Georgenia ruanii sp. nov., a novel actinobacterium isolated from forest soil in Yunnan (China) and emended description of the genus Georgenia. Int J Syst Evol Microbiol 57, 1424-1428.
12. Li, J., Zhao, G. Z., Qin, S., Zhu, W. Y., Xu, L. H. & Li, W. J. (2009). Streptomyces sedi sp. nov., isolated from a surface-sterilized tissue of Sedum sp. Int J Syst Evol Microbiol 59, 1492-1496.
13. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
14. Minnikin, D. E., Collins, M. D. & Goodfellow, M. (1979). Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa. J Appl Bacteriol 47, 87-95.
15. Petrolini, B., Quaroni, S., Sardi, P., Saracchi, M. & Andriollo, N. (1992). A sporangiate actinomycete with unusual morphological features: Streptosporangium claviforme sp. nov. Actinomycetes 3, 45-50.
16. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
17. Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids. USFCC Newsl 20, 16.
18. Shirling, E. B. & Gottlieb, D. (1966). Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16, 313-340.
19. Staneck, J. L. & Roberts, G. D. (1974). Simplified approach to identification of aerobic actinomycetes by thin layer chromatography. Appl Microbiol 28, 226-231.
20. Tamaoka, J., Katayama-Fujimura, Y. & Kuraishi, H. (1983). Analysis of bacterial menaquinone mixtures by high performance liquid chromatography. J Appl Bacteriol 54, 31-36.
21. Tamura, T. & Sakane, T. (2004). Planotetraspora silvatica sp. nov. and emended description of the genus Planotetraspora. Int J Syst Evol Microbiol 54, 2053-2056.
22. Tamura, T., Suzuki, S. I. & Hatano, K. (2000). Acrocarpospora gen. nov., a new genus of the order Actinomycetales. Int J Syst Evol Microbiol 50, 1163-1171.
23. Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
24. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
25. Williams, S. T., Goodfellow, M., Alderson, G., Wellington, E. M. H., Sneath, P. H. A. & Sackin, M. J. (1983). Numerical classification of Streptomyces and related genera. J Gen Microbiol 129, 1743-1813.
26. Xu, P., Li, W. J., Tang, S. K., Zhang, Y. Q., Chen, G. Z., Chen, H. H., Xu, L. H. & Jiang, C. L. (2005). Naxibacter alkalitolerans gen. nov., sp. nov., a novel member of the family Oxalobacteraceae isolated from China. Int J Syst Evol Microbiol 55, 1149-1153.