메뉴 건너뛰기




Volumn 10, Issue 1, 2010, Pages 77-83

Sequence analysis and PCR-RFLP profiling of the hsp70 gene as a valuable tool for identifying Leishmania species associated with human leishmaniasis in Brazil

Author keywords

Genotyping; hsp70; Leishmania; MLEE; Molecular typing; PCR RFLP

Indexed keywords

HEAT SHOCK PROTEIN 70; RESTRICTION ENDONUCLEASE;

EID: 72149116705     PISSN: 15671348     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.meegid.2009.11.001     Document Type: Article
Times cited : (68)

References (40)
  • 3
    • 4243678908 scopus 로고    scopus 로고
    • Molecular epidemiology and evolutionary genetics of Leishmania parasites
    • Banuls A.L., Hide M., and Tibayrenc M. Molecular epidemiology and evolutionary genetics of Leishmania parasites. Int. J. Parasitol. 29 (1999) 1137-1147
    • (1999) Int. J. Parasitol. , vol.29 , pp. 1137-1147
    • Banuls, A.L.1    Hide, M.2    Tibayrenc, M.3
  • 5
    • 0242271971 scopus 로고    scopus 로고
    • Leishmania (Viannia) utingensis n.sp., a parasite from the sandfly Lutzomyia (Viannamyia) tuberculata in Amazonian Brazil
    • Braga R.R., Lainson R., Ishikawa E.A.Y., and Shaw J.J. Leishmania (Viannia) utingensis n.sp., a parasite from the sandfly Lutzomyia (Viannamyia) tuberculata in Amazonian Brazil. Parasite 10 (2003) 111-118
    • (2003) Parasite , vol.10 , pp. 111-118
    • Braga, R.R.1    Lainson, R.2    Ishikawa, E.A.Y.3    Shaw, J.J.4
  • 6
    • 0028203331 scopus 로고
    • A general classification of New-World Leishmania using numerical zymotaxonomy
    • Cupolillo E., Grimaldi G., and Momen H. A general classification of New-World Leishmania using numerical zymotaxonomy. Am. J. Trop. Med. Hyg. 50 (1994) 296-311
    • (1994) Am. J. Trop. Med. Hyg. , vol.50 , pp. 296-311
    • Cupolillo, E.1    Grimaldi, G.2    Momen, H.3
  • 7
    • 0028784625 scopus 로고
    • Intergenic Region Typing (Irt)-a rapid molecular approach to the characterization and evolution of Leishmania
    • Cupolillo E., Grimaldi G., Momen H., and Beverley S.M. Intergenic Region Typing (Irt)-a rapid molecular approach to the characterization and evolution of Leishmania. Mol. Biochem. Parasitol. 73 (1995) 145-155
    • (1995) Mol. Biochem. Parasitol. , vol.73 , pp. 145-155
    • Cupolillo, E.1    Grimaldi, G.2    Momen, H.3    Beverley, S.M.4
  • 8
    • 0032151449 scopus 로고    scopus 로고
    • Genetic diversity in natural populations of New World Leishmania
    • Cupolillo E., Momen H., and Grimaldi G. Genetic diversity in natural populations of New World Leishmania. Mem. Inst. Oswaldo Cruz 93 (1998) 663-668
    • (1998) Mem. Inst. Oswaldo Cruz , vol.93 , pp. 663-668
    • Cupolillo, E.1    Momen, H.2    Grimaldi, G.3
  • 10
    • 0031978181 scopus 로고    scopus 로고
    • Automated sequencer traces using Phred. II. Error probabilities
    • Ewing B., and Green P. Automated sequencer traces using Phred. II. Error probabilities. Genome Res. 8 (1998) 186-194
    • (1998) Genome Res. , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 12
    • 34250351297 scopus 로고    scopus 로고
    • A postgenomic view of the heat shock proteins in kinetoplastids
    • Folgueira C., and Requena J.M. A postgenomic view of the heat shock proteins in kinetoplastids. FEMS Microbiol. Rev. 31 (2007) 359-377
    • (2007) FEMS Microbiol. Rev. , vol.31 , pp. 359-377
    • Folgueira, C.1    Requena, J.M.2
  • 13
    • 2442551896 scopus 로고    scopus 로고
    • Culture-independent species typing of neotropical Leishmania for clinical validation of a PCR-based assay targeting heat shock protein 70 genes
    • Garcia L., Kindt A., Bermudez H., Llanos-Cuentas A., De Doncker S., Arevalo J., Tintaya K.W.Q., and Dujardin J.C. Culture-independent species typing of neotropical Leishmania for clinical validation of a PCR-based assay targeting heat shock protein 70 genes. J. Clin. Microbiol. 42 (2004) 2294-2297
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 2294-2297
    • Garcia, L.1    Kindt, A.2    Bermudez, H.3    Llanos-Cuentas, A.4    De Doncker, S.5    Arevalo, J.6    Tintaya, K.W.Q.7    Dujardin, J.C.8
  • 15
    • 35648997850 scopus 로고    scopus 로고
    • Epidemiological monitoring of American tegumentary leishmaniasis: molecular characterization of a peridomestic transmission cycle in the Amazonian lowlands of Bolivia
    • Garcia A.L., Tellez T., Parrado R., Rojas E., Bermudez H., and Dujardin J.C. Epidemiological monitoring of American tegumentary leishmaniasis: molecular characterization of a peridomestic transmission cycle in the Amazonian lowlands of Bolivia. Trans. R. Soc. Trop. Med. Hyg. 101 (2007) 1208-1213
    • (2007) Trans. R. Soc. Trop. Med. Hyg. , vol.101 , pp. 1208-1213
    • Garcia, A.L.1    Tellez, T.2    Parrado, R.3    Rojas, E.4    Bermudez, H.5    Dujardin, J.C.6
  • 16
    • 0031955116 scopus 로고    scopus 로고
    • Consed: a graphical tool for sequence finishing
    • Gordon D., Abajian C., and Green P. Consed: a graphical tool for sequence finishing. Genome Res. 8 (1998) 195-202
    • (1998) Genome Res. , vol.8 , pp. 195-202
    • Gordon, D.1    Abajian, C.2    Green, P.3
  • 17
    • 0035054380 scopus 로고    scopus 로고
    • Automated finishing with autofinish
    • Gordon D., Desmarais C., and Green P. Automated finishing with autofinish. Genome Res. 11 (2001) 614-625
    • (2001) Genome Res. , vol.11 , pp. 614-625
    • Gordon, D.1    Desmarais, C.2    Green, P.3
  • 18
    • 0026349744 scopus 로고
    • Characterization and classification of leishmanial parasites from humans, wild mammals, and sand flies in the Amazon region of Brazil
    • Grimaldi G., Momen H., Naiff R.D., Mcmahonpratt D., and Barrett T.V. Characterization and classification of leishmanial parasites from humans, wild mammals, and sand flies in the Amazon region of Brazil. Am. J. Trop. Med. Hyg. 44 (1991) 645-661
    • (1991) Am. J. Trop. Med. Hyg. , vol.44 , pp. 645-661
    • Grimaldi, G.1    Momen, H.2    Naiff, R.D.3    Mcmahonpratt, D.4    Barrett, T.V.5
  • 19
    • 0033517487 scopus 로고    scopus 로고
    • Leishmaniasis
    • Herwaldt B.L. Leishmaniasis. Lancet 354 (1999) 1191-1199
    • (1999) Lancet , vol.354 , pp. 1191-1199
    • Herwaldt, B.L.1
  • 22
    • 0002536191 scopus 로고
    • Evolution, classification and geographical distribution
    • Peters W., and Kendrick K. (Eds), London Academic Press, London, UK
    • Lainson R., and Shaw J.J. Evolution, classification and geographical distribution. In: Peters W., and Kendrick K. (Eds). The Leishmaniases in Biology and Medicine. 2nd ed. (1987), London Academic Press, London, UK 1-128
    • (1987) The Leishmaniases in Biology and Medicine. 2nd ed. , pp. 1-128
    • Lainson, R.1    Shaw, J.J.2
  • 23
    • 0037492951 scopus 로고    scopus 로고
    • Identification and differentiation of Leishmania species in clinical samples by PCR amplification of the miniexon sequence and subsequent restriction fragment length polymorphism analysis
    • Marfurt J., Nasereddin A., Niederwieser I., Jaffe C.L., Beck H.P., and Felger I. Identification and differentiation of Leishmania species in clinical samples by PCR amplification of the miniexon sequence and subsequent restriction fragment length polymorphism analysis. J. Clin. Microbiol. 41 (2003) 3147-3153
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 3147-3153
    • Marfurt, J.1    Nasereddin, A.2    Niederwieser, I.3    Jaffe, C.L.4    Beck, H.P.5    Felger, I.6
  • 24
    • 33744967724 scopus 로고    scopus 로고
    • Towards multilocus sequence typing of the Leishmania donovani complex: resolving genotypes and haplotypes for five polymorphic metabolic enzymes (ASAT, GPI, NH1, NH2, PGD)
    • Mauricio I.L., Yeo M., Baghaei M., Doto D., Pratlong F., Zemanova E., Dedet J.P., Lukes J., and Miles M.A. Towards multilocus sequence typing of the Leishmania donovani complex: resolving genotypes and haplotypes for five polymorphic metabolic enzymes (ASAT, GPI, NH1, NH2, PGD). Int. J. Parasitol. 36 (2006) 757-769
    • (2006) Int. J. Parasitol. , vol.36 , pp. 757-769
    • Mauricio, I.L.1    Yeo, M.2    Baghaei, M.3    Doto, D.4    Pratlong, F.5    Zemanova, E.6    Dedet, J.P.7    Lukes, J.8    Miles, M.A.9
  • 26
    • 34548439941 scopus 로고    scopus 로고
    • Isolation and molecular identification of Leishmania (Viannia) peruviana from naturally infected Lutzomyia peruensis (Diptera: Psychodidae) in the Peruvian Andes
    • Perez J.E., Veland N., Espinosa D., Torres K., Ogusuku E., Llanos-Cuentas A., Gamboa D., and Arevalo J. Isolation and molecular identification of Leishmania (Viannia) peruviana from naturally infected Lutzomyia peruensis (Diptera: Psychodidae) in the Peruvian Andes. Mem. Inst. Oswaldo Cruz 102 (2007) 655-658
    • (2007) Mem. Inst. Oswaldo Cruz , vol.102 , pp. 655-658
    • Perez, J.E.1    Veland, N.2    Espinosa, D.3    Torres, K.4    Ogusuku, E.5    Llanos-Cuentas, A.6    Gamboa, D.7    Arevalo, J.8
  • 28
    • 0025169406 scopus 로고
    • Amplification of kinetoplast DNA as a tool in the detection and diagnosis of Leishmania
    • Rodgers M.R., Popper S.J., and Wirth D.F. Amplification of kinetoplast DNA as a tool in the detection and diagnosis of Leishmania. Exp. Parasitol. 71 (1990) 267-275
    • (1990) Exp. Parasitol. , vol.71 , pp. 267-275
    • Rodgers, M.R.1    Popper, S.J.2    Wirth, D.F.3
  • 29
    • 32344432401 scopus 로고    scopus 로고
    • Use of PCR-restriction fragment length polymorphism analysis to identify the main new world Leishmania species and analyze their taxonomic properties and polymorphism by application of the assay to clinical samples
    • Rotureau B., Ravel C., Couppie P., Pratlong F., Nacher M., Dedet J.P., and Carme B. Use of PCR-restriction fragment length polymorphism analysis to identify the main new world Leishmania species and analyze their taxonomic properties and polymorphism by application of the assay to clinical samples. J. Clin. Microbiol. 44 (2006) 459-467
    • (2006) J. Clin. Microbiol. , vol.44 , pp. 459-467
    • Rotureau, B.1    Ravel, C.2    Couppie, P.3    Pratlong, F.4    Nacher, M.5    Dedet, J.P.6    Carme, B.7
  • 32
    • 0036519172 scopus 로고    scopus 로고
    • An outbreak of cutaneous leishmaniasis among soldiers in Belem, Para State, Brazil, caused by Leishmania (Viannia) lindenbergi n. sp.-a new leishmanial parasite of man in the Amazon region
    • Silveira F.T., Ishikawa E.A.Y., De Souza A.A.A., and Lainson R. An outbreak of cutaneous leishmaniasis among soldiers in Belem, Para State, Brazil, caused by Leishmania (Viannia) lindenbergi n. sp.-a new leishmanial parasite of man in the Amazon region. Parasite 9 (2002) 43-50
    • (2002) Parasite , vol.9 , pp. 43-50
    • Silveira, F.T.1    Ishikawa, E.A.Y.2    De Souza, A.A.A.3    Lainson, R.4
  • 33
    • 72149103303 scopus 로고    scopus 로고
    • Leishmania spp. identification by polymerase chain reaction-restriction fragment length polymorphism analysis and its applications in French Guiana
    • (Epub ahead of print)
    • Simon S., Veron V., and Carme B. Leishmania spp. identification by polymerase chain reaction-restriction fragment length polymorphism analysis and its applications in French Guiana. Diagn. Microbiol. Infect. Dis. (2009) (Epub ahead of print)
    • (2009) Diagn. Microbiol. Infect. Dis.
    • Simon, S.1    Veron, V.2    Carme, B.3
  • 34
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M., and Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24 (2007) 1596-1599
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 36
    • 1642263324 scopus 로고    scopus 로고
    • Antigen genes for molecular epidemiology of leishmaniasis: polymorphism of cysteine proteinase B and surface metalloprotease glycoprotein 63 in the Leishmania donovani complex
    • Tintaya K.W.Q., Ying X., Dedet J.P., Rijal S., De Bolle X., and Dujardin J.C. Antigen genes for molecular epidemiology of leishmaniasis: polymorphism of cysteine proteinase B and surface metalloprotease glycoprotein 63 in the Leishmania donovani complex. J. Infect. Dis. 189 (2004) 1035-1043
    • (2004) J. Infect. Dis. , vol.189 , pp. 1035-1043
    • Tintaya, K.W.Q.1    Ying, X.2    Dedet, J.P.3    Rijal, S.4    De Bolle, X.5    Dujardin, J.C.6
  • 38
    • 58549085751 scopus 로고    scopus 로고
    • Typing of four genetic loci discriminates among closely related species of New World Leishmania
    • Tsukayama P., Lucas C., and Bacon D.J. Typing of four genetic loci discriminates among closely related species of New World Leishmania. Int. J. Parasitol. 39 (2009) 355-362
    • (2009) Int. J. Parasitol. , vol.39 , pp. 355-362
    • Tsukayama, P.1    Lucas, C.2    Bacon, D.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.