-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0014470664
-
Improved technique for isolation and identification of Sphaerotilus
-
Armbruster, E. H. (1969). Improved technique for isolation and identification of Sphaerotilus. Appl Microbiol 17, 320-321.
-
(1969)
Appl Microbiol
, vol.17
, pp. 320-321
-
-
Armbruster, E.H.1
-
3
-
-
0036022475
-
Characterization of filamentous Eikelboom type 021N bacteria and description of Thiothrix disciformis sp. nov. and Thiothrix flexilis sp. nov
-
Aruga, S., Kamagata, Y., Kohno, T., Hanada, S., Nakamura, K. & Kanagawa, T. (2002). Characterization of filamentous Eikelboom type 021N bacteria and description of Thiothrix disciformis sp. nov. and Thiothrix flexilis sp. nov. Int J Syst Evol Microbiol 52, 1309-1316.
-
(2002)
Int J Syst Evol Microbiol
, vol.52
, pp. 1309-1316
-
-
Aruga, S.1
Kamagata, Y.2
Kohno, T.3
Hanada, S.4
Nakamura, K.5
Kanagawa, T.6
-
4
-
-
0004270170
-
-
Ausubel, F. M, Brent, R, Kingston, R. E, Moore, D. D, Seidman, J. G, Smith, J. A. & Struhl, K, editors, New York: Wiley
-
Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A. & Struhl, K. (editors) (1994). Current Protocols in Molecular Biology. New York: Wiley.
-
(1994)
Current Protocols in Molecular Biology
-
-
-
5
-
-
0025718806
-
Polymerase chain reaction-gene probe detection of microorganisms by using filter-concentrated samples
-
Bej, A. K., Mahbubani, M. H., Dicesare, J. L. & Atlas, R. M. (1991). Polymerase chain reaction-gene probe detection of microorganisms by using filter-concentrated samples. Appl Environ Microbiol 57, 3529-3534.
-
(1991)
Appl Environ Microbiol
, vol.57
, pp. 3529-3534
-
-
Bej, A.K.1
Mahbubani, M.H.2
Dicesare, J.L.3
Atlas, R.M.4
-
6
-
-
0033883789
-
Evaluation of recA sequences for identification of Mycobacterium species
-
Blackwood, K. S., He, C., Gunton, J., Turenne, C. Y., Wolfe, J. & Kabani, A. M. (2000). Evaluation of recA sequences for identification of Mycobacterium species. J Clin Microbiol 38, 2846-2852.
-
(2000)
J Clin Microbiol
, vol.38
, pp. 2846-2852
-
-
Blackwood, K.S.1
He, C.2
Gunton, J.3
Turenne, C.Y.4
Wolfe, J.5
Kabani, A.M.6
-
7
-
-
43049122086
-
Phylogenetic in situ/ex situ analysis of a sulfur mat microbial community from a thermal sulfide spring in the North Caucasus
-
in Russian
-
Chernousova, E. Yu., Akimov, V. N., Gridneva, E. V., Dubinina, G. A. & Grabovich, M. Yu. (2008). Phylogenetic in situ/ex situ analysis of a sulfur mat microbial community from a thermal sulfide spring in the North Caucasus. Mikrobiologiia 77, 255-260 (in Russian).
-
(2008)
Mikrobiologiia
, vol.77
, pp. 255-260
-
-
Chernousova, E.Y.1
Akimov, V.N.2
Gridneva, E.V.3
Dubinina, G.A.4
Grabovich, M.Y.5
-
8
-
-
0026723774
-
Use of repetitive (repetitive extragenic palindromic and enterobacterial repetitive intergenic consensus) sequences and the polymerase chain reaction to fingerprint the genomes of Rhizobium meliloti isolates and other soil bacteria
-
De Bruijn, F. J. (1992). Use of repetitive (repetitive extragenic palindromic and enterobacterial repetitive intergenic consensus) sequences and the polymerase chain reaction to fingerprint the genomes of Rhizobium meliloti isolates and other soil bacteria. Appl Environ Microbiol 58, 2180-2187.
-
(1992)
Appl Environ Microbiol
, vol.58
, pp. 2180-2187
-
-
De Bruijn, F.J.1
-
9
-
-
0014713693
-
The quantitative measurement of DNA hybridization from renaturation rates
-
De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
-
(1970)
Eur J Biochem
, vol.12
, pp. 133-142
-
-
De Ley, J.1
Cattoir, H.2
Reynaerts, A.3
-
10
-
-
47549101031
-
A new system of degenerate-oligonucleotide primers for detection and amplification of nifHD genes
-
in Russian
-
Fedorov, D. N., Ivanova, E. G., Doronina, N. V. & Trotsenko, Yu. A. (2008). A new system of degenerate-oligonucleotide primers for detection and amplification of nifHD genes. Mikrobiologiia 77, 286-288 (in Russian).
-
(2008)
Mikrobiologiia
, vol.77
, pp. 286-288
-
-
Fedorov, D.N.1
Ivanova, E.G.2
Doronina, N.V.3
Trotsenko, Y.A.4
-
11
-
-
0004217184
-
-
Gerhardt, P, Murray, R. G. E, Costilow, R. N, Nester, E. W, Wood, W. A, Krieg, N. R. & Phillips, G. B, editors, Washington, DC: American Society for Microbiology
-
Gerhardt, P., Murray, R. G. E., Costilow, R. N., Nester, E. W., Wood, W. A., Krieg, N. R. & Phillips, G. B. (editors) (1981). Manual of Methods for General Bacteriology. Washington, DC: American Society for Microbiology.
-
(1981)
Manual of Methods for General Bacteriology
-
-
-
12
-
-
0034993313
-
Construction and bootstrap analysis of DNA fingerprinting-based phylogenetic trees with the freeware program FreeTree: Application to trichomonad parasites
-
Hampl, V., Pavli'cek, A. & Flegr, J. (2001). Construction and bootstrap analysis of DNA fingerprinting-based phylogenetic trees with the freeware program FreeTree: application to trichomonad parasites. Int J Syst Evol Microbiol 51, 731-735.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 731-735
-
-
Hampl, V.1
Pavli'cek, A.2
Flegr, J.3
-
13
-
-
72149083256
-
Taxonomic studies on Streptomyces violaceoruber group and related species based on gyrB sequences
-
Hatano, K. & Nishii, T. (1994). Taxonomic studies on Streptomyces violaceoruber group and related species based on gyrB sequences. IFO Res Commun 20, 83-91.
-
(1994)
IFO Res Commun
, vol.20
, pp. 83-91
-
-
Hatano, K.1
Nishii, T.2
-
14
-
-
33644840902
-
Improved template representation in cpn60 PCR product libraries generated from complex templates by application of a specific mixture of PCR primers
-
Hill, J. E., Town, J. R. & Hemmingsen, S. M. (2006). Improved template representation in cpn60 PCR product libraries generated from complex templates by application of a specific mixture of PCR primers. Environ Microbiol 8, 741-746.
-
(2006)
Environ Microbiol
, vol.8
, pp. 741-746
-
-
Hill, J.E.1
Town, J.R.2
Hemmingsen, S.M.3
-
15
-
-
0032748483
-
-
Howarth, R., Unz, R. F., Seviour, E. M., Seviour, R. J., Blackall, L. L., Pickup, R. W., Jones, J. G., Yaguchi, J. & Head, I. M. (1999). Phylogenetic relationships of filamentous sulfur bacteria (Thiothrix spp. and Eikelboom type 021N bacteria) isolated from wastewatertreatment plants and description of Thiothrix eikelboomii sp. nov., Thiothrix unzii sp. nov., Thiothrix fructosivorans sp. nov. and Thiothrix defluvii sp. nov. Int J Syst Bacteriol 49, 1817-1827.
-
Howarth, R., Unz, R. F., Seviour, E. M., Seviour, R. J., Blackall, L. L., Pickup, R. W., Jones, J. G., Yaguchi, J. & Head, I. M. (1999). Phylogenetic relationships of filamentous sulfur bacteria (Thiothrix spp. and Eikelboom type 021N bacteria) isolated from wastewatertreatment plants and description of Thiothrix eikelboomii sp. nov., Thiothrix unzii sp. nov., Thiothrix fructosivorans sp. nov. and Thiothrix defluvii sp. nov. Int J Syst Bacteriol 49, 1817-1827.
-
-
-
-
16
-
-
0034807791
-
New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences
-
Jian, W., Zhu, L. & Dong, X. (2001). New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences. Int J Syst Evol Microbiol 51, 1633-1638.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 1633-1638
-
-
Jian, W.1
Zhu, L.2
Dong, X.3
-
17
-
-
0000732090
-
Evolution of protein molecules
-
Edited by H. N. Munro. New York: Academic Press
-
Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, vol. 3, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
-
(1969)
Mammalian Protein Metabolism
, vol.3
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
18
-
-
0032991292
-
Species identification and phylogenetic relationships based on partial HSP60 gene sequences within the genus Staphylococcus
-
Kwok, A. Y., Su, S. C., Reynolds, R. P., Bay, S. J., Av-Gay, Y., Dovichi, N. J. & Chow, A. W. (1999). Species identification and phylogenetic relationships based on partial HSP60 gene sequences within the genus Staphylococcus. Int J Syst Bacteriol 49, 1181-1192.
-
(1999)
Int J Syst Bacteriol
, vol.49
, pp. 1181-1192
-
-
Kwok, A.Y.1
Su, S.C.2
Reynolds, R.P.3
Bay, S.J.4
Av-Gay, Y.5
Dovichi, N.J.6
Chow, A.W.7
-
19
-
-
0001857117
-
-
Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley
-
Lane, D. G. (1991). In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. Chichester: Wiley.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.G.1
-
21
-
-
0024241467
-
The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions
-
Medlin, L., Elwood, H. J., Stickel, S. & Sogin, M. L. (1988). The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions. Gene 71, 491-499.
-
(1988)
Gene
, vol.71
, pp. 491-499
-
-
Medlin, L.1
Elwood, H.J.2
Stickel, S.3
Sogin, M.L.4
-
22
-
-
0005814023
-
Mathematical model for studying genetic variation in terms of restriction endonucleases
-
Nei, M. & Li, W. H. (1979). Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci U S A 76, 5269-5273.
-
(1979)
Proc Natl Acad Sci U S A
, vol.76
, pp. 5269-5273
-
-
Nei, M.1
Li, W.H.2
-
23
-
-
0017061707
-
The thermal denaturation of partly purified bacterial deoxyribonucleic acid and its taxonomic applications
-
Owen, R. J. & Lapage, S. P. (1976). The thermal denaturation of partly purified bacterial deoxyribonucleic acid and its taxonomic applications. J Appl Bacteriol 41, 335-340.
-
(1976)
J Appl Bacteriol
, vol.41
, pp. 335-340
-
-
Owen, R.J.1
Lapage, S.P.2
-
24
-
-
0141614742
-
Phylogenetic and physiological characterization of a heterotrophic, chemolithoautotrophic Thiothrix strain isolated from activated sludge
-
Rossetti, S., Blackall, L. L., Levantesi, C., Uccelletti, D. & Tandoi, V. (2003). Phylogenetic and physiological characterization of a heterotrophic, chemolithoautotrophic Thiothrix strain isolated from activated sludge. Int J Syst Evol Microbiol 53, 1271-1276.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 1271-1276
-
-
Rossetti, S.1
Blackall, L.L.2
Levantesi, C.3
Uccelletti, D.4
Tandoi, V.5
-
25
-
-
0026615537
-
Evaluation of a commercial microbial identification system based on fatty acid profiles for rapid, accurate identification of plant pathogenic bacteria
-
Stead, D. E., Sellwood, J. E., Wilson, J. & Winey, I. (1992). Evaluation of a commercial microbial identification system based on fatty acid profiles for rapid, accurate identification of plant pathogenic bacteria. J Appl Bacteriol 72, 315-321.
-
(1992)
J Appl Bacteriol
, vol.72
, pp. 315-321
-
-
Stead, D.E.1
Sellwood, J.E.2
Wilson, J.3
Winey, I.4
-
26
-
-
0014374438
-
Acetylene reduction by nitrogen fixing blue-green algae
-
Stewart, W. D. P., Fitzerald, G. P. & Burris, R. H. (1968). Acetylene reduction by nitrogen fixing blue-green algae. Arch Mikrobiol 62, 336-348.
-
(1968)
Arch Mikrobiol
, vol.62
, pp. 336-348
-
-
Stewart, W.D.P.1
Fitzerald, G.P.2
Burris, R.H.3
-
27
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
28
-
-
72149131142
-
-
AL. In Bergey's Manual of Systematic Bacteriology, 2nd edn, 2, part B, pp. 131-142. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
-
AL. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2, part B, pp. 131-142. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
-
-
-
-
29
-
-
0028509254
-
TREECON for Windows: A software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment
-
Van de Peer, Y. & De Wachter, R. (1994). TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput Appl Biosci 10, 569-570.
-
(1994)
Comput Appl Biosci
, vol.10
, pp. 569-570
-
-
Van de Peer, Y.1
De Wachter, R.2
-
30
-
-
0021940466
-
Filamentous sulfur bacteria of activated sludge: Characterization of Thiothrix, Beggiatoa, and Eikelboom type 021N strains
-
Williams, T. M. & Unz, R. F. (1985). Filamentous sulfur bacteria of activated sludge: characterization of Thiothrix, Beggiatoa, and Eikelboom type 021N strains. Appl Environ Microbiol 49, 887-898.
-
(1985)
Appl Environ Microbiol
, vol.49
, pp. 887-898
-
-
Williams, T.M.1
Unz, R.F.2
-
31
-
-
0031827993
-
Phylogenetic relationships of Pseudomonas putida strains deduced from the nucleotide sequences of gyrB, rpoD and 16S rRNA genes
-
Yamamoto, S. & Harayama, S. (1998). Phylogenetic relationships of Pseudomonas putida strains deduced from the nucleotide sequences of gyrB, rpoD and 16S rRNA genes. Int J Syst Bacteriol 48, 813-819.
-
(1998)
Int J Syst Bacteriol
, vol.48
, pp. 813-819
-
-
Yamamoto, S.1
Harayama, S.2
-
32
-
-
0032931780
-
Phylogenetic structure of the genus Acinetobacter based on gyrB sequences: Comparison with the grouping by DNA-DNA hybridization
-
Yamamoto, S., Bouvet, P. J. M. & Harayama, S. (1999). Phylogenetic structure of the genus Acinetobacter based on gyrB sequences: comparison with the grouping by DNA-DNA hybridization. Int J Syst Bacteriol 49, 87-95.
-
(1999)
Int J Syst Bacteriol
, vol.49
, pp. 87-95
-
-
Yamamoto, S.1
Bouvet, P.J.M.2
Harayama, S.3
|