-
2
-
-
0034721164
-
Error and attack tolerance of complex networks
-
Albert R., Jeong H., and Barabási A.-L. Error and attack tolerance of complex networks. Nature 406 (2000) 378-382
-
(2000)
Nature
, vol.406
, pp. 378-382
-
-
Albert, R.1
Jeong, H.2
Barabási, A.-L.3
-
3
-
-
2942606066
-
Structure and evolution of transcriptional regulatory networks
-
Babu M.M., Luscombe N.M., Aravind L., Gerstein M., and Teichmann S.A. Structure and evolution of transcriptional regulatory networks. Current Opinion in Structural Biology 14 (2004) 283-292
-
(2004)
Current Opinion in Structural Biology
, vol.14
, pp. 283-292
-
-
Babu, M.M.1
Luscombe, N.M.2
Aravind, L.3
Gerstein, M.4
Teichmann, S.A.5
-
4
-
-
23144460685
-
Artificial regulatory networks and genetic programming
-
Riolo R., and Worzel B. (Eds), Kluwer Publishers, Boston, MA, USA (Chapter 4)
-
Banzhaf W. Artificial regulatory networks and genetic programming. In: Riolo R., and Worzel B. (Eds). Genetic Programming Theory and Practice (2003), Kluwer Publishers, Boston, MA, USA 43-62 (Chapter 4)
-
(2003)
Genetic Programming Theory and Practice
, pp. 43-62
-
-
Banzhaf, W.1
-
5
-
-
0038483826
-
Emergence of scaling in random networks
-
Barabási A.-L., and Albert R. Emergence of scaling in random networks. Science 286 5439 (1999) 509-512
-
(1999)
Science
, vol.286
, Issue.5439
, pp. 509-512
-
-
Barabási, A.-L.1
Albert, R.2
-
6
-
-
0036856356
-
A duplication growth model of gene expression networks
-
Bhan A., Galas D.J., and Dewey T.G. A duplication growth model of gene expression networks. Bioinformatics 18 11 (2002) 1486-1493
-
(2002)
Bioinformatics
, vol.18
, Issue.11
, pp. 1486-1493
-
-
Bhan, A.1
Galas, D.J.2
Dewey, T.G.3
-
7
-
-
85194580934
-
-
Clauset, A., Shalizi, C.R., Newman, M.E.J., 2007. Power-law distributions in empirical data. arXiv: 0706.1062 (E-print).
-
Clauset, A., Shalizi, C.R., Newman, M.E.J., 2007. Power-law distributions in empirical data. arXiv: 0706.1062 (E-print).
-
-
-
-
8
-
-
0037423295
-
Scale-free networks are ultrasmall
-
Cohen R., and Havlin S. Scale-free networks are ultrasmall. Physical Review Letters 90 5 (2004) 058701.1-0587014.0587014
-
(2004)
Physical Review Letters
, vol.90
, Issue.5
-
-
Cohen, R.1
Havlin, S.2
-
9
-
-
0036207347
-
Modeling and simulation of genetic regulatory systems: a literature review
-
de Jong H. Modeling and simulation of genetic regulatory systems: a literature review. Computational Biology 9 1 (2002) 67-103
-
(2002)
Computational Biology
, vol.9
, Issue.1
, pp. 67-103
-
-
de Jong, H.1
-
11
-
-
33745779621
-
Effects of scale-free and small-world topologies on binary coded self-adaptive cea
-
Gottlieb J., and Raidl G.R. (Eds). Springer, Budapest, Hungary, April 10-12, 2006
-
Giacobini M., Preuss M., and Tomassini M. Effects of scale-free and small-world topologies on binary coded self-adaptive cea. In: Gottlieb J., and Raidl G.R. (Eds). Evolutionary Computation in Combinatorial Optimization, 6th European Conference, EvoCOP 2006, Proceedings, vol. 3906 of Lecture Notes in Computer Science. Springer, Budapest, Hungary, April 10-12, 2006 (2006) 86-98
-
(2006)
Evolutionary Computation in Combinatorial Optimization, 6th European Conference, EvoCOP 2006, Proceedings, vol. 3906 of Lecture Notes in Computer Science
, pp. 86-98
-
-
Giacobini, M.1
Preuss, M.2
Tomassini, M.3
-
12
-
-
32444436685
-
Takeover time curves in random and small-world structured populations
-
Beyer H.-G., et al. (Ed). ACM, Washington, DC, USA, June 25-29, 2005
-
Giacobini M., Tomassini M., and Tettamanzi A. Takeover time curves in random and small-world structured populations. In: Beyer H.-G., et al. (Ed). Genetic and Evolutionary Computation-GECCO 2005, Genetic and Evolutionary Computation Conference, Proceedings, vol. 2. ACM, Washington, DC, USA, June 25-29, 2005 (2005) 1333-1340
-
(2005)
Genetic and Evolutionary Computation-GECCO 2005, Genetic and Evolutionary Computation Conference, Proceedings, vol. 2
, pp. 1333-1340
-
-
Giacobini, M.1
Tomassini, M.2
Tettamanzi, A.3
-
14
-
-
0036578654
-
Topological and causal structure of the yeast transcriptional regulatory network
-
Guelzim N., Bottani S., Bourgine P., and Képès F. Topological and causal structure of the yeast transcriptional regulatory network. Nature Genetics 31 (2002) 60-63
-
(2002)
Nature Genetics
, vol.31
, pp. 60-63
-
-
Guelzim, N.1
Bottani, S.2
Bourgine, P.3
Képès, F.4
-
15
-
-
1842436050
-
The echo state approach to analysing and training recurrent neural networks
-
German National Research Center for Information Technology
-
Jaeger, H., 2001. The echo state approach to analysing and training recurrent neural networks. Technical Report GMD Report 148, German National Research Center for Information Technology.
-
(2001)
Technical Report GMD Report
, vol.148
-
-
Jaeger, H.1
-
16
-
-
0034609791
-
The large-scale organization of metabolic networks
-
Jeong H., Tombor B., Albert R., Oltvai Z.N., and Barabási A.-L. The large-scale organization of metabolic networks. Nature 407 (2000) 651-654
-
(2000)
Nature
, vol.407
, pp. 651-654
-
-
Jeong, H.1
Tombor, B.2
Albert, R.3
Oltvai, Z.N.4
Barabási, A.-L.5
-
17
-
-
56449131435
-
Supervised and evolutionary learning of echo state networks
-
Rudolph G., et al. (Ed). Springer-Verlag, Dortmund, Germany, September 13-17, 2008
-
Jiang F., Berry H., and Schoenauer M. Supervised and evolutionary learning of echo state networks. In: Rudolph G., et al. (Ed). Parallel Problem Solving from Nature-PPSN X, 10th International Conference, Proceedings, vol. 866 of Lecture Notes in Computer Science. Springer-Verlag, Dortmund, Germany, September 13-17, 2008 (2008) 215-224
-
(2008)
Parallel Problem Solving from Nature-PPSN X, 10th International Conference, Proceedings, vol. 866 of Lecture Notes in Computer Science
, pp. 215-224
-
-
Jiang, F.1
Berry, H.2
Schoenauer, M.3
-
18
-
-
1942452749
-
Proof and evolutionary analysis of ancient genome duplication in the yeast saccharomyces cerevisiae
-
Kellis M., Birren B.W., and Lander E.S. Proof and evolutionary analysis of ancient genome duplication in the yeast saccharomyces cerevisiae. Nature 428 (2004) 617-624
-
(2004)
Nature
, vol.428
, pp. 617-624
-
-
Kellis, M.1
Birren, B.W.2
Lander, E.S.3
-
21
-
-
33746922321
-
Network topology and the evolution of dynamics in an artificial regulatory network model created by whole genome duplication and divergence
-
Kuo P.D., Banzhaf W., and Leier A. Network topology and the evolution of dynamics in an artificial regulatory network model created by whole genome duplication and divergence. Biosystems 85 3 (2006) 177-200
-
(2006)
Biosystems
, vol.85
, Issue.3
, pp. 177-200
-
-
Kuo, P.D.1
Banzhaf, W.2
Leier, A.3
-
22
-
-
0003819663
-
-
Morgan Kaufmann, San Mateo, CA, USA
-
Leighton F.T. Introduction to Parallel Algorithms and Architectures: Arrays, Trees, Hypercubes (1992), Morgan Kaufmann, San Mateo, CA, USA
-
(1992)
Introduction to Parallel Algorithms and Architectures: Arrays, Trees, Hypercubes
-
-
Leighton, F.T.1
-
23
-
-
0000873069
-
A method for the solution of certain problems in least squares
-
Levenberg K. A method for the solution of certain problems in least squares. The Quarterly of Applied Mathematics 2 (1944) 164-168
-
(1944)
The Quarterly of Applied Mathematics
, vol.2
, pp. 164-168
-
-
Levenberg, K.1
-
24
-
-
4644326931
-
Genomic analysis of regulatory network dynamics reveals large topological changes
-
Luscombe N.M., Babu M.M., Yu H., Snyder M., Teichmann S.A., and Gerstein M. Genomic analysis of regulatory network dynamics reveals large topological changes. Nature 431 (2004) 308-312
-
(2004)
Nature
, vol.431
, pp. 308-312
-
-
Luscombe, N.M.1
Babu, M.M.2
Yu, H.3
Snyder, M.4
Teichmann, S.A.5
Gerstein, M.6
-
25
-
-
0000169232
-
An algorithm for least-squares estimation of nonlinear parameters
-
Marquardt D. An algorithm for least-squares estimation of nonlinear parameters. SIAM Journal on Applied Mathematics 11 (1963) 431-441
-
(1963)
SIAM Journal on Applied Mathematics
, vol.11
, pp. 431-441
-
-
Marquardt, D.1
-
26
-
-
1542287343
-
Superfamilies of evolved and designed networks
-
Milo R., Itzkovitz S., Kashtan N., Levitt R., Shen-Orr S., Ayzenshtat I., Sheffer M., and Alon U. Superfamilies of evolved and designed networks. Science 303 5663 (2004) 1538-1542
-
(2004)
Science
, vol.303
, Issue.5663
, pp. 1538-1542
-
-
Milo, R.1
Itzkovitz, S.2
Kashtan, N.3
Levitt, R.4
Shen-Orr, S.5
Ayzenshtat, I.6
Sheffer, M.7
Alon, U.8
-
27
-
-
24744469980
-
Power laws, pareto distributions and zipf's law
-
Newman M.E.J. Power laws, pareto distributions and zipf's law. Contemporary Physics 46 (2005) 323-351
-
(2005)
Contemporary Physics
, vol.46
, pp. 323-351
-
-
Newman, M.E.J.1
-
28
-
-
72749123772
-
Evolving specific network statistical properties using a gene regulatory network model
-
Raidl G., et al. (Ed). ACM, Montreal, Canada, July 8-12, 2009
-
Nicolau M., and Schoenauer M. Evolving specific network statistical properties using a gene regulatory network model. In: Raidl G., et al. (Ed). Genetic and Evolutionary Computation-GECCO 2009, Genetic and Evolutionary Computation Conference, Proceedings. ACM, Montreal, Canada, July 8-12, 2009 (2009)
-
(2009)
Genetic and Evolutionary Computation-GECCO 2009, Genetic and Evolutionary Computation Conference, Proceedings
-
-
Nicolau, M.1
Schoenauer, M.2
-
29
-
-
0037460091
-
Evolving protein interaction networks through gene duplication
-
Pastor-Satorras R., Smith E., and Solé R.V. Evolving protein interaction networks through gene duplication. Theoretical Biology 222 (2003) 199-210
-
(2003)
Theoretical Biology
, vol.222
, pp. 199-210
-
-
Pastor-Satorras, R.1
Smith, E.2
Solé, R.V.3
-
30
-
-
34548126518
-
Takeover times on scale-free topologies
-
Thierens D., et al. (Ed). ACM, London, UK, July 7-11, 2008
-
Payne J.L., and Eppstein M.J. Takeover times on scale-free topologies. In: Thierens D., et al. (Ed). Genetic and Evolutionary Computation-GECCO 2007, Genetic and Evolutionary Computation Conference, Proceedings. ACM, London, UK, July 7-11, 2008 (2007) 308-315
-
(2007)
Genetic and Evolutionary Computation-GECCO 2007, Genetic and Evolutionary Computation Conference, Proceedings
, pp. 308-315
-
-
Payne, J.L.1
Eppstein, M.J.2
-
31
-
-
57549094670
-
The influence of scaling and assortativity on takeover times in scale-free topologies
-
Keijzer M., et al. (Ed). ACM, Atlanta, GA, USA, July 12-16, 2008
-
Payne J.L., and Eppstein M.J. The influence of scaling and assortativity on takeover times in scale-free topologies. In: Keijzer M., et al. (Ed). Genetic and Evolutionary Computation-GECCO 2008, Genetic and Evolutionary Computation Conference, Proceedings. ACM, Atlanta, GA, USA, July 12-16, 2008 (2008) 241-248
-
(2008)
Genetic and Evolutionary Computation-GECCO 2008, Genetic and Evolutionary Computation Conference, Proceedings
, pp. 241-248
-
-
Payne, J.L.1
Eppstein, M.J.2
-
33
-
-
84957670701
-
Dynamics of gene expression in an artificial genome-implications for biological and artificial ontogeny
-
Floreano D., Nicoud J.-D., and Mondada F. (Eds). Springer, Lausanne, Switzerland, September 13-17, 1999
-
Reil T. Dynamics of gene expression in an artificial genome-implications for biological and artificial ontogeny. In: Floreano D., Nicoud J.-D., and Mondada F. (Eds). Advances in Artificial Life, 5th European Conference, ECAL'99, Proceedings, vol. 1674 of Lecture Notes in Artificial Life. Springer, Lausanne, Switzerland, September 13-17, 1999 (1999) 457-466
-
(1999)
Advances in Artificial Life, 5th European Conference, ECAL'99, Proceedings, vol. 1674 of Lecture Notes in Artificial Life
, pp. 457-466
-
-
Reil, T.1
-
34
-
-
85194543163
-
Network structure and dynamics, and emergence of robustness by stabilizing selection in an artificial genome
-
Universitat Leipzig, Leipzig, Germany, July 30-August 1, 2008
-
Rohlf T., and Winkler C. Network structure and dynamics, and emergence of robustness by stabilizing selection in an artificial genome. 8th German Workshop on Artificial Life, GWAL-8, Proceedings. Universitat Leipzig, Leipzig, Germany, July 30-August 1, 2008 (2008)
-
(2008)
8th German Workshop on Artificial Life, GWAL-8, Proceedings
-
-
Rohlf, T.1
Winkler, C.2
-
35
-
-
33750256183
-
Evolution of small-world networks of automata for computation
-
Yao X., et al. (Ed). Springer, Birmingham, UK, September 18-22, 2004
-
Tomassini M., Giacobini M., and Darabos C. Evolution of small-world networks of automata for computation. In: Yao X., et al. (Ed). Parallel Problem Solving from Nature-PPSN VIII, 8th International Conference, Proceedings, vol. 3242 of Lecture Notes in Computer Science. Springer, Birmingham, UK, September 18-22, 2004 (2004) 672-681
-
(2004)
Parallel Problem Solving from Nature-PPSN VIII, 8th International Conference, Proceedings, vol. 3242 of Lecture Notes in Computer Science
, pp. 672-681
-
-
Tomassini, M.1
Giacobini, M.2
Darabos, C.3
-
37
-
-
4644292576
-
The yeast coexpression network has a small-world, scale-free architecture and can be explained by a simple model
-
van Noort V., Snel B., and Huynen M.A. The yeast coexpression network has a small-world, scale-free architecture and can be explained by a simple model. EMBO Reports 5 3 (2004) 280-284
-
(2004)
EMBO Reports
, vol.5
, Issue.3
, pp. 280-284
-
-
van Noort, V.1
Snel, B.2
Huynen, M.A.3
-
39
-
-
0030947344
-
Molecular evidence for an ancient duplication of the entire yeast genome
-
Wolfe K., and Shields D. Molecular evidence for an ancient duplication of the entire yeast genome. Nature 387 (1997) 708-713
-
(1997)
Nature
, vol.387
, pp. 708-713
-
-
Wolfe, K.1
Shields, D.2
-
40
-
-
0034887573
-
Scale-free behavior in protein domain networks
-
Wuchty S. Scale-free behavior in protein domain networks. Molecular Biology and Evolution 18 (2001) 1694-1702
-
(2001)
Molecular Biology and Evolution
, vol.18
, pp. 1694-1702
-
-
Wuchty, S.1
-
41
-
-
0141484611
-
Evolutionary conservation of motif constituents in the yeast protein interaction network
-
Wuchty S., Oltvai Z.N., and Barabási A.-L. Evolutionary conservation of motif constituents in the yeast protein interaction network. Nature Genetics 35 (2003) 176-179
-
(2003)
Nature Genetics
, vol.35
, pp. 176-179
-
-
Wuchty, S.1
Oltvai, Z.N.2
Barabási, A.-L.3
|