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Volumn 222, Issue 2, 2003, Pages 199-210

Evolving protein interaction networks through gene duplication

Author keywords

Complex networks; Evolution; Genome; Proteome; Sealing

Indexed keywords

PROTEOME;

EID: 0037460091     PISSN: 00225193     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0022-5193(03)00028-6     Document Type: Article
Times cited : (357)

References (57)
  • 2
    • 0034721164 scopus 로고    scopus 로고
    • Error and attack tolerance of complex networks
    • Albert R.A., Jeong H., Barabási A.-L. Error and attack tolerance of complex networks. Nature. 406:2000;378-382.
    • (2000) Nature , vol.406 , pp. 378-382
    • Albert, R.A.1    Jeong, H.2    Barabási, A.-L.3
  • 4
    • 0032127258 scopus 로고    scopus 로고
    • Reductive evolution of resident genomes
    • Andersson S.G.E., Kurland C. Reductive evolution of resident genomes. Trends Microbiol. 6:1998;263-268.
    • (1998) Trends Microbiol. , vol.6 , pp. 263-268
    • Andersson, S.G.E.1    Kurland, C.2
  • 8
    • 0029037739 scopus 로고
    • Protein molecules as computational elements in living cells
    • Bray D. Protein molecules as computational elements in living cells. Nature. 376:1995;307-312.
    • (1995) Nature , vol.376 , pp. 307-312
    • Bray, D.1
  • 9
    • 0001154886 scopus 로고    scopus 로고
    • Modularity and reliability in the organization of organisms
    • Clarcke B., Mittenthal J.E. Modularity and reliability in the organization of organisms. Bull. Math. Biol. 54:2001;1-20.
    • (2001) Bull. Math. Biol. , vol.54 , pp. 1-20
    • Clarcke, B.1    Mittenthal, J.E.2
  • 10
    • 0035923604 scopus 로고    scopus 로고
    • Degeneracy and complexity in biological systems
    • Edelman G.M., Gally J.A. Degeneracy and complexity in biological systems. Proc. Natl Acad. Sci. USA. 98:2001;13763-13768.
    • (2001) Proc. Natl Acad. Sci. USA , vol.98 , pp. 13763-13768
    • Edelman, G.M.1    Gally, J.A.2
  • 11
    • 0033764169 scopus 로고    scopus 로고
    • The small world of metabolism
    • Fell D., Wagner A. The small world of metabolism. Nature Biotech. 18:2000;1121.
    • (2000) Nature Biotech. , vol.18 , pp. 1121
    • Fell, D.1    Wagner, A.2
  • 12
    • 0035475793 scopus 로고    scopus 로고
    • The topology of technology graphs: Small world pattern in electronic circuits
    • Ferrer i Cancho R., Janssen C., Solé R.V. The topology of technology graphs. small world pattern in electronic circuits Phys. Rev. E. 63:2001;32767.
    • (2001) Phys. Rev. E , vol.63 , pp. 32767
    • Ferrer i Cancho, R.1    Janssen, C.2    Solé, R.V.3
  • 17
    • 0030963019 scopus 로고    scopus 로고
    • Towards a functional analysis of the yeast genome through exhaustive two-hybrid screens
    • Fromont-Racine M., Rain J.C., Legrain P. Towards a functional analysis of the yeast genome through exhaustive two-hybrid screens. Nature Genet. 16:1997;277-282.
    • (1997) Nature Genet. , vol.16 , pp. 277-282
    • Fromont-Racine, M.1    Rain, J.C.2    Legrain, P.3
  • 19
    • 0037050026 scopus 로고    scopus 로고
    • Functional organization of the yeast proteome by systematic analysis of protein complexes
    • Gavin A. Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature. 415:2002;141-147.
    • (2002) Nature , vol.415 , pp. 141-147
    • Gavin, A.1
  • 24
    • 0037050004 scopus 로고    scopus 로고
    • Systematic identification of protein complexes in Saccharomyces cerevisiae
    • Ho Y. Systematic identification of protein complexes in Saccharomyces cerevisiae. Nature. 415:2002;180-183.
    • (2002) Nature , vol.415 , pp. 180-183
    • Ho, Y.1
  • 25
    • 0033974688 scopus 로고    scopus 로고
    • Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins
    • Ito T., Tashiro K., Muta S., Ozawa R., Chiba T., Nishizawa M., Yamamoto K., Kuhara S., Sakaki Y. Toward a protein-protein interaction map of the budding yeast. a comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins Proc. Natl Acad. Sci. USA. 97:2000;1143-1147.
    • (2000) Proc. Natl Acad. Sci. USA , vol.97 , pp. 1143-1147
    • Ito, T.1    Tashiro, K.2    Muta, S.3    Ozawa, R.4    Chiba, T.5    Nishizawa, M.6    Yamamoto, K.7    Kuhara, S.8    Sakaki, Y.9
  • 28
    • 37649031137 scopus 로고    scopus 로고
    • Infinite-order percolation and giant fluctuations in a protein interaction network
    • Kim J., Krapivsky P.L., Kahng B., Redner S. Infinite-order percolation and giant fluctuations in a protein interaction network. Phys. Rev. E. 66:2002;055101.
    • (2002) Phys. Rev. E , vol.66 , pp. 055101
    • Kim, J.1    Krapivsky, P.L.2    Kahng, B.3    Redner, S.4
  • 30
    • 0037050020 scopus 로고    scopus 로고
    • Protein complexes take the bait
    • Kumar A., Snyder M. Protein complexes take the bait. Nature. 415:2001;123-124.
    • (2001) Nature , vol.415 , pp. 123-124
    • Kumar, A.1    Snyder, M.2
  • 32
    • 0034712955 scopus 로고    scopus 로고
    • Genome-wide analysis of vaccinia virus protein-protein interactions
    • McCraith S., Holtzman T., Moss B., Fields S. Genome-wide analysis of vaccinia virus protein-protein interactions. Proc. Natl Acad. Sci. USA. 97:2000;4879-4884.
    • (2000) Proc. Natl Acad. Sci. USA , vol.97 , pp. 4879-4884
    • McCraith, S.1    Holtzman, T.2    Moss, B.3    Fields, S.4
  • 35
    • 0036353494 scopus 로고    scopus 로고
    • Small world patters in fodd webs
    • Montoya J.M., Solé R.V. Small world patters in fodd webs. J. theor. Biol. 214:2002;405-412.
    • (2002) J. theor. Biol. , vol.214 , pp. 405-412
    • Montoya, J.M.1    Solé, R.V.2
  • 36
    • 0030716471 scopus 로고    scopus 로고
    • Comparable rates of gene loss and functional divergence after genome duplications early in vertebrate evolution
    • Nadeau J.H., Sankoff D. Comparable rates of gene loss and functional divergence after genome duplications early in vertebrate evolution. Genetics. 147:1997;1259-1266.
    • (1997) Genetics , vol.147 , pp. 1259-1266
    • Nadeau, J.H.1    Sankoff, D.2
  • 38
    • 0034020583 scopus 로고    scopus 로고
    • Global properties of the metabolic map of Escherichia coli
    • Ouzounis C.A., Karp P.D. Global properties of the metabolic map of Escherichia coli. Genome Res. 10:2000;568-576.
    • (2000) Genome Res. , vol.10 , pp. 568-576
    • Ouzounis, C.A.1    Karp, P.D.2
  • 45
    • 0034777716 scopus 로고    scopus 로고
    • Birth of scale-free molecular networks and the number of distinct dna and protein domains per genome
    • Rzhetsky A., Gomez S.M. Birth of scale-free molecular networks and the number of distinct dna and protein domains per genome. Bioinformatics. 17:2001;988-996.
    • (2001) Bioinformatics , vol.17 , pp. 988-996
    • Rzhetsky, A.1    Gomez, S.M.2
  • 46
    • 85040474279 scopus 로고    scopus 로고
    • Selection, tinkering, and emergence in complex networks
    • Solé R.V., Ferrer R., Montoya J.M., Valverde S. Selection, tinkering, and emergence in complex networks. Complexity. 8:2002;20-33.
    • (2002) Complexity , vol.8 , pp. 20-33
    • Solé, R.V.1    Ferrer, R.2    Montoya, J.M.3    Valverde, S.4
  • 49
    • 0032077377 scopus 로고    scopus 로고
    • From specific gene regulation to genomic networks: A global analysis of transcriptional regulation in Escherichia coli
    • Thieffry D., Huerta A.M., Pérez-Rueda E., Collado-Vives J. From specific gene regulation to genomic networks. a global analysis of transcriptional regulation in Escherichia coli BioEssays. 20:1998;433-440.
    • (1998) BioEssays , vol.20 , pp. 433-440
    • Thieffry, D.1    Huerta, A.M.2    Pérez-Rueda, E.3    Collado-Vives, J.4
  • 51
    • 0034029892 scopus 로고    scopus 로고
    • Robustness against mutations in genetic networks of yeast
    • Wagner A. Robustness against mutations in genetic networks of yeast. Nature Genet. 24:2000;355-361.
    • (2000) Nature Genet. , vol.24 , pp. 355-361
    • Wagner, A.1
  • 52
    • 0034943378 scopus 로고    scopus 로고
    • The yeast protein interaction network evolves rapidly and contains few redundant duplicate genes
    • Wagner A. The yeast protein interaction network evolves rapidly and contains few redundant duplicate genes. Mol. Biol. Evol. 18:2001;1283-1292.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 1283-1292
    • Wagner, A.1
  • 54
    • 0004081447 scopus 로고    scopus 로고
    • Princeton: Princeton University Press
    • Watts D.J. Small Worlds. 1999;Princeton University Press, Princeton.
    • (1999) Small Worlds
    • Watts, D.J.1
  • 55
    • 0032482432 scopus 로고    scopus 로고
    • Collective dynamics of 'small-world' networks
    • Watts D.J., Strogatz S.H. Collective dynamics of 'small-world' networks. Nature. 393:1998;440-442.
    • (1998) Nature , vol.393 , pp. 440-442
    • Watts, D.J.1    Strogatz, S.H.2
  • 57
    • 0034887573 scopus 로고    scopus 로고
    • Scale-free behavior in protein domain networks
    • Wuchty S. Scale-free behavior in protein domain networks. Mol. Biol. Evol. 18:2001;1694-1702.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 1694-1702
    • Wuchty, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.