-
1
-
-
0037129228
-
Biodiversity: microbial genomes multiply
-
Doolittle R.F. Biodiversity: microbial genomes multiply. Nature 416 (2002) 697-700
-
(2002)
Nature
, vol.416
, pp. 697-700
-
-
Doolittle, R.F.1
-
2
-
-
0033153375
-
Alignment of whole genomes
-
Delcher A.L., et al. Alignment of whole genomes. Nucleic Acids Res. 27 (1999) 2369-2376
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 2369-2376
-
-
Delcher, A.L.1
-
3
-
-
3543051830
-
Mauve: multiple alignment of conserved genomic sequence with rearrangements
-
Darling A.C., et al. Mauve: multiple alignment of conserved genomic sequence with rearrangements. Genome Res. 14 (2004) 1394-1403
-
(2004)
Genome Res.
, vol.14
, pp. 1394-1403
-
-
Darling, A.C.1
-
4
-
-
0025183708
-
Basic local alignment search tool
-
Altschul S.F., et al. Basic local alignment search tool. J. Mol. Biol. 215 (1990) 403-410
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
-
5
-
-
0030660581
-
A genomic perspective on protein families
-
Tatusov R.L., et al. A genomic perspective on protein families. Science 278 (1997) 631-637
-
(1997)
Science
, vol.278
, pp. 631-637
-
-
Tatusov, R.L.1
-
6
-
-
0034069495
-
Gene ontology: tool for the unification of biology
-
Ashburner M., et al. Gene ontology: tool for the unification of biology. Nat. Genet. 25 (2000) 25-29
-
(2000)
Nat. Genet.
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
-
7
-
-
24044433279
-
ACT: the Artemis Comparison Tool
-
Carver T.J., et al. ACT: the Artemis Comparison Tool. Bioinformatics 21 (2005) 3422-3423
-
(2005)
Bioinformatics
, vol.21
, pp. 3422-3423
-
-
Carver, T.J.1
-
8
-
-
57049116993
-
Bluejay 1.0: genome browsing and comparison with rich customization provision and dynamic resource linking
-
Soh J., et al. Bluejay 1.0: genome browsing and comparison with rich customization provision and dynamic resource linking. BMC Bioinformatics 9 (2008) 450
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 450
-
-
Soh, J.1
-
9
-
-
0346463207
-
BugView: a browser for comparing genomes
-
Leader D.P. BugView: a browser for comparing genomes. Bioinformatics 20 (2004) 129-130
-
(2004)
Bioinformatics
, vol.20
, pp. 129-130
-
-
Leader, D.P.1
-
10
-
-
33751190274
-
CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between closely related genomes
-
Uchiyama I., et al. CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between closely related genomes. BMC Bioinformatics 7 (2006) 472
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 472
-
-
Uchiyama, I.1
-
11
-
-
14644438364
-
Circular genome visualization and exploration using CGView
-
Stothard P., and Wishart D.S. Circular genome visualization and exploration using CGView. Bioinformatics 21 (2005) 537-539
-
(2005)
Bioinformatics
, vol.21
, pp. 537-539
-
-
Stothard, P.1
Wishart, D.S.2
-
12
-
-
33747891100
-
Combo: a whole genome comparative browser
-
Engels R., et al. Combo: a whole genome comparative browser. Bioinformatics 22 (2006) 1782-1783
-
(2006)
Bioinformatics
, vol.22
, pp. 1782-1783
-
-
Engels, R.1
-
13
-
-
58049208278
-
DNAPlotter: circular and linear interactive genome visualization
-
Carver T., et al. DNAPlotter: circular and linear interactive genome visualization. Bioinformatics 25 (2009) 119-120
-
(2009)
Bioinformatics
, vol.25
, pp. 119-120
-
-
Carver, T.1
-
14
-
-
32144434368
-
DNAVis: interactive visualization of comparative genome annotations
-
Fiers M.W., et al. DNAVis: interactive visualization of comparative genome annotations. Bioinformatics 22 (2006) 354-355
-
(2006)
Bioinformatics
, vol.22
, pp. 354-355
-
-
Fiers, M.W.1
-
15
-
-
13244278001
-
GATA: a graphic alignment tool for comparative sequence analysis
-
Nix D.A., and Eisen M.E. GATA: a graphic alignment tool for comparative sequence analysis. BMC Bioinformatics 6 (2005) 9
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 9
-
-
Nix, D.A.1
Eisen, M.E.2
-
16
-
-
2942576207
-
GeneViTo: visualizing gene-product functional and structural features in genomic datasets
-
Vernikos G.S., et al. GeneViTo: visualizing gene-product functional and structural features in genomic datasets. BMC Bioinformatics 4 (2003) 53
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 53
-
-
Vernikos, G.S.1
-
17
-
-
0042388219
-
GenoMap, a circular genome data viewer
-
Sato N., and Ehira S. GenoMap, a circular genome data viewer. Bioinformatics 19 (2003) 1583-1584
-
(2003)
Bioinformatics
, vol.19
, pp. 1583-1584
-
-
Sato, N.1
Ehira, S.2
-
18
-
-
4644279904
-
Genome2D: a visualization tool for the rapid analysis of bacterial transcriptome data
-
Baerends R.J., et al. Genome2D: a visualization tool for the rapid analysis of bacterial transcriptome data. Genome Biol. 5 (2004) R37
-
(2004)
Genome Biol.
, vol.5
-
-
Baerends, R.J.1
-
19
-
-
0038798562
-
GenomeComp: a visualization tool for microbial genome comparison
-
Yang J., et al. GenomeComp: a visualization tool for microbial genome comparison. J. Microbiol. Methods 54 (2003) 423-426
-
(2003)
J. Microbiol. Methods
, vol.54
, pp. 423-426
-
-
Yang, J.1
-
20
-
-
52649124812
-
GenomeMatcher: a graphical user interface for DNA sequence comparison
-
Ohtsubo Y., et al. GenomeMatcher: a graphical user interface for DNA sequence comparison. BMC Bioinformatics 9 (2008) 376
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 376
-
-
Ohtsubo, Y.1
-
21
-
-
0041592516
-
Genome visualization made fast and simple
-
Gibson R., and Smith D.R. Genome visualization made fast and simple. Bioinformatics 19 (2003) 1449-1450
-
(2003)
Bioinformatics
, vol.19
, pp. 1449-1450
-
-
Gibson, R.1
Smith, D.R.2
-
22
-
-
13244252363
-
GenomeViz: visualizing microbial genomes
-
Ghai R., et al. GenomeViz: visualizing microbial genomes. BMC Bioinformatics 5 (2004) 198
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 198
-
-
Ghai, R.1
-
23
-
-
34447286021
-
Genomorama: genome visualization and analysis
-
Gans J.D., and Wolinsky M. Genomorama: genome visualization and analysis. BMC Bioinformatics 8 (2007) 204
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 204
-
-
Gans, J.D.1
Wolinsky, M.2
-
24
-
-
1842821076
-
Visualization for genomics: the Microbial Genome Viewer
-
Kerkhoven R., et al. Visualization for genomics: the Microbial Genome Viewer. Bioinformatics 20 (2004) 1812-1814
-
(2004)
Bioinformatics
, vol.20
, pp. 1812-1814
-
-
Kerkhoven, R.1
-
25
-
-
2942538300
-
Versatile and open software for comparing large genomes
-
Kurtz S., et al. Versatile and open software for comparing large genomes. Genome Biol. 5 (2004) R12
-
(2004)
Genome Biol.
, vol.5
-
-
Kurtz, S.1
-
26
-
-
0642309748
-
SeqVISTA: a graphical tool for sequence feature visualization and comparison
-
Hu Z., et al. SeqVISTA: a graphical tool for sequence feature visualization and comparison. BMC Bioinformatics 4 (2003) 1
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 1
-
-
Hu, Z.1
-
27
-
-
2442673974
-
Sockeye: a 3D environment for comparative genomics
-
Montgomery S.B., et al. Sockeye: a 3D environment for comparative genomics. Genome Res. 14 (2004) 956-962
-
(2004)
Genome Res.
, vol.14
, pp. 956-962
-
-
Montgomery, S.B.1
|