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Volumn 28, Issue 23, 2009, Pages 3635-3645

Histone H1 binding is inhibited by histone variant H3.3

Author keywords

Chromatin; DamID; H1; H3.3; Nucleosome spacing

Indexed keywords

HISTONE H1; HISTONE H3; HISTONE H3.3; UNCLASSIFIED DRUG;

EID: 71349083638     PISSN: 02614189     EISSN: 14602075     Source Type: Journal    
DOI: 10.1038/emboj.2009.301     Document Type: Article
Times cited : (87)

References (47)
  • 1
    • 0036299092 scopus 로고    scopus 로고
    • The histone variant H3.3 marks active chromatin by replication- independent nucleosome assembly
    • Ahmad K, Henikoff S (2002) The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly. Mol Cell 9: 1191-1200
    • (2002) Mol Cell , vol.9 , pp. 1191-1200
    • Ahmad, K.1    Henikoff, S.2
  • 3
    • 0017710691 scopus 로고
    • Composition and template activity of chromatin fractionated by isoelectric focusing
    • Chiu N, Baserga R, Furth JJ (1977) Composition and template activity of chromatin fractionated by isoelectric focusing. Biochemistry 16: 4796-4802
    • (1977) Biochemistry , vol.16 , pp. 4796-4802
    • Chiu, N.1    Baserga, R.2    Furth, J.J.3
  • 6
    • 0036307707 scopus 로고    scopus 로고
    • Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution
    • Davey CA, Sargent DF, Luger K, Maeder AW, Richmond TJ (2002) Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution. J Mol Biol 319: 1097-1113
    • (2002) J Mol Biol , vol.319 , pp. 1097-1113
    • Davey, C.A.1    Sargent, D.F.2    Luger, K.3    Maeder, A.W.4    Richmond, T.J.5
  • 7
    • 34047231261 scopus 로고    scopus 로고
    • High-resolution mapping reveals links of HP1 with active and inactive chromatin components
    • de Wit E, Greil F, van Steensel B (2007) High-resolution mapping reveals links of HP1 with active and inactive chromatin components. PLoS Genet 3: e38
    • (2007) PLoS Genet , vol.3
    • De Wit, E.1    Greil, F.2    Van Steensel, B.3
  • 9
    • 0035833993 scopus 로고    scopus 로고
    • Distinctive higher-order chromatin structure at mammalian centromeres
    • Gilbert N, Allan J (2001) Distinctive higher-order chromatin structure at mammalian centromeres. Proc Natl Acad Sci USA 98: 11949-11954
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 11949-11954
    • Gilbert, N.1    Allan, J.2
  • 10
    • 34250369627 scopus 로고    scopus 로고
    • FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin
    • Giresi PG, Kim J, McDaniell RM, Iyer VR, Lieb JD (2007) FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin. Genome Res 17: 877-885
    • (2007) Genome Res , vol.17 , pp. 877-885
    • Giresi, P.G.1    Kim, J.2    McDaniell, R.M.3    Iyer, V.R.4    Lieb, J.D.5
  • 12
    • 33747831899 scopus 로고    scopus 로고
    • DamID: Mapping of in vivo protein-genome interactions using tethered DNA adenine methyltransferase
    • Greil F, Moorman C, van Steensel B (2006) DamID: mapping of in vivo protein-genome interactions using tethered DNA adenine methyltransferase. Methods Enzymol 410: 342-359
    • (2006) Methods Enzymol , vol.410 , pp. 342-359
    • Greil, F.1    Moorman, C.2    Van Steensel, B.3
  • 13
    • 61849170193 scopus 로고    scopus 로고
    • Genome-wide profiling of salt fractions maps physical properties of chromatin
    • Henikoff S, Henikoff JG, Sakai A, Loeb GB, Ahmad K (2009) Genome-wide profiling of salt fractions maps physical properties of chromatin. Genome Res 19: 460-469
    • (2009) Genome Res , vol.19 , pp. 460-469
    • Henikoff, S.1    Henikoff, J.G.2    Sakai, A.3    Loeb, G.B.4    Ahmad, K.5
  • 14
    • 33749406106 scopus 로고    scopus 로고
    • Cell cycle-specified fluctuation of nucleosome occupancy at gene promoters
    • Hogan GJ, Lee CK, Lieb JD (2006) Cell cycle-specified fluctuation of nucleosome occupancy at gene promoters. PLoS Genet 2: e158
    • (2006) PLoS Genet , vol.2
    • Hogan, G.J.1    Lee, C.K.2    Lieb, J.D.3
  • 17
    • 11844299709 scopus 로고    scopus 로고
    • A method for the in vitro reconstitution of a defined '30 nm' chromatin fibre containing stoichiometric amounts of the linker histone
    • Huynh VA, Robinson PJ, Rhodes (2005) A method for the in vitro reconstitution of a defined '30 nm' chromatin fibre containing stoichiometric amounts of the linker histone. J Mol Biol 345: 957-968
    • (2005) J Mol Biol , vol.345 , pp. 957-968
    • Huynh, V.A.1    Robinson, P.J.2    Rhodes3
  • 18
    • 0346414510 scopus 로고
    • Localization of RNA polymerase in polytene chromosomes of Drosophila melanoga-ster
    • Jamrich M, Greenleaf AL, Bautz EK (1977) Localization of RNA polymerase in polytene chromosomes of Drosophila melanoga-ster. Proc Natl Acad Sci USA 74: 2079-2083
    • (1977) Proc Natl Acad Sci USA , vol.74 , pp. 2079-2083
    • Jamrich, M.1    Greenleaf, A.L.2    Bautz, E.K.3
  • 19
    • 34250745886 scopus 로고    scopus 로고
    • Nucleosome stability mediated by histone variants H3.3 and H2A.Z
    • Jin C, Felsenfeld G (2007) Nucleosome stability mediated by histone variants H3.3 and H2A.Z. Genes Dev 21: 1519-1529
    • (2007) Genes Dev , vol.21 , pp. 1519-1529
    • Jin, C.1    Felsenfeld, G.2
  • 21
    • 33749657892 scopus 로고    scopus 로고
    • PTMs on H3 variants before chromatin assembly potentiate their final epigenetic state
    • Loyola A, Bonaldi T, Roche D, Imhof A, Almouzni G (2006) PTMs on H3 variants before chromatin assembly potentiate their final epigenetic state. Mol Cell 24: 309-316
    • (2006) Mol Cell , vol.24 , pp. 309-316
    • Loyola, A.1    Bonaldi, T.2    Roche, D.3    Imhof, A.4    Almouzni, G.5
  • 22
    • 61449102557 scopus 로고    scopus 로고
    • Linker histone H1 is essential for Drosophila development, the establishment of pericentric hetero-chromatin, and a normal polytene chromosome structure
    • Lu X, Wontakal SN, Emelyanov AV, Morcillo P, Konev AY, Fyodorov DV, Skoultchi AI (2009) Linker histone H1 is essential for Drosophila development, the establishment of pericentric hetero-chromatin, and a normal polytene chromosome structure. Genes Dev 23: 452-465
    • (2009) Genes Dev , vol.23 , pp. 452-465
    • Lu, X.1    Wontakal, S.N.2    Emelyanov, A.V.3    Morcillo, P.4    Konev, A.Y.5    Fyodorov, D.V.6    Skoultchi, A.I.7
  • 24
    • 1242342240 scopus 로고    scopus 로고
    • Histone H3.3 is enriched in covalent modifications associated with active chromatin
    • McKittrick E, Gafken PR, Ahmad K, Henikoff S (2004) Histone H3.3 is enriched in covalent modifications associated with active chromatin. Proc Natl Acad Sci USA 101: 1525-1530
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 1525-1530
    • McKittrick, E.1    Gafken, P.R.2    Ahmad, K.3    Henikoff, S.4
  • 25
    • 33947098453 scopus 로고    scopus 로고
    • Histone replacement marks the boundaries of cis-regulatory domains
    • Mito Y, Henikoff JG, Henikoff S (2007) Histone replacement marks the boundaries of cis-regulatory domains. Science 315: 1408-1411
    • (2007) Science , vol.315 , pp. 1408-1411
    • Mito, Y.1    Henikoff, J.G.2    Henikoff, S.3
  • 28
    • 52949087943 scopus 로고    scopus 로고
    • Identification of JAK/STAT pathway regulators-insights from RNAi screens
    • Muller P, Boutros M, Zeidler MP (2008) Identification of JAK/STAT pathway regulators-insights from RNAi screens. Semin Cell Dev Biol 19: 360-369
    • (2008) Semin Cell Dev Biol , vol.19 , pp. 360-369
    • Muller, P.1    Boutros, M.2    Zeidler, M.P.3
  • 29
    • 37749051130 scopus 로고    scopus 로고
    • Epigenetic memory of an active gene state depends on histone H3.3 incorporation into chromatin in the absence of transcription
    • Ng RK, Gurdon JB (2008) Epigenetic memory of an active gene state depends on histone H3.3 incorporation into chromatin in the absence of transcription. Nat Cell Biol 10: 102-109
    • (2008) Nat Cell Biol , vol.10 , pp. 102-109
    • Ng, R.K.1    Gurdon, J.B.2
  • 30
    • 0019247312 scopus 로고
    • The role of histone H1 in compaction of nucleosomes. Sedimentation behaviour of oligonucleosomes in solution
    • Osipova TN, Pospelov VA, Svetlikova SB, Vorob'ev VI (1980) The role of histone H1 in compaction of nucleosomes. Sedimentation behaviour of oligonucleosomes in solution. Eur J Biochem 113: 183-188
    • (1980) Eur J Biochem , vol.113 , pp. 183-188
    • Osipova, T.N.1    Pospelov, V.A.2    Svetlikova, S.B.3    Vorob'Ev, V.I.4
  • 34
    • 55449090888 scopus 로고    scopus 로고
    • Depletion of human histone H1 variants uncovers specific roles in gene expression and cell growth
    • Sancho M, Diani E, Beato M, Jordan A (2008) Depletion of human histone H1 variants uncovers specific roles in gene expression and cell growth. PLoS Genet 4: e1000227
    • (2008) PLoS Genet , vol.4
    • Sancho, M.1    Diani, E.2    Beato, M.3    Jordan, A.4
  • 35
    • 17044394787 scopus 로고    scopus 로고
    • Transcriptional activation triggers deposition and removal of the histone variant H3.3
    • Schwartz BE, Ahmad K (2005) Transcriptional activation triggers deposition and removal of the histone variant H3.3. Genes Dev 19: 804-814
    • (2005) Genes Dev , vol.19 , pp. 804-814
    • Schwartz, B.E.1    Ahmad, K.2
  • 37
    • 0024313494 scopus 로고
    • Histone H1 represses transcription from minichromosomes assembled in vitro
    • Shimamura A, Sapp M, Rodriguez-Campos A, Worcel A (1989) Histone H1 represses transcription from minichromosomes assembled in vitro. Mol Cell Biol 9: 5573-5584
    • (1989) Mol Cell Biol , vol.9 , pp. 5573-5584
    • Shimamura, A.1    Sapp, M.2    Rodriguez-Campos, A.3    Worcel, A.4
  • 38
    • 0018266771 scopus 로고
    • Structure of the chromatosome, a chromatin particle containing 160 base pairs of DNA and all the histones
    • Simpson RT (1978) Structure of the chromatosome, a chromatin particle containing 160 base pairs of DNA and all the histones. Biochemistry 17: 5524-5531
    • (1978) Biochemistry , vol.17 , pp. 5524-5531
    • Simpson, R.T.1
  • 39
    • 70349323113 scopus 로고    scopus 로고
    • Drosophila ISWI regulates the association of histone h1 with interphase chromosomes in vivo
    • Siriaco G, Deuring R, Chioda M, Becker P, Tamkun J (2009) Drosophila ISWI regulates the association of histone h1 with interphase chromosomes in vivo. Genetics 182: 661-669
    • (2009) Genetics , vol.182 , pp. 661-669
    • Siriaco, G.1    Deuring, R.2    Chioda, M.3    Becker, P.4    Tamkun, J.5
  • 40
    • 0035085098 scopus 로고    scopus 로고
    • Long-range nucleosome ordering is associated with gene silencing in Drosophila melanogaster pericentric heterochromatin
    • Sun FL, Cuaycong MH, Elgin SC (2001) Long-range nucleosome ordering is associated with gene silencing in Drosophila melanogaster pericentric heterochromatin. Mol Cell Biol 21: 2867-2879
    • (2001) Mol Cell Biol , vol.21 , pp. 2867-2879
    • Sun, F.L.1    Cuaycong, M.H.2    Elgin, S.C.3
  • 42
    • 0032972980 scopus 로고    scopus 로고
    • The location of the linker histone on the nucleo-some
    • Travers A (1999) The location of the linker histone on the nucleo-some. Trends Biochem Sci 24: 4-7
    • (1999) Trends Biochem Sci , vol.24 , pp. 4-7
    • Travers, A.1
  • 43
  • 46
    • 29244467484 scopus 로고    scopus 로고
    • Role of linker histone in chromatin structure and function: H1 stoichiometry and nucleo-some repeat length
    • Woodcock CL, Skoultchi AI, Fan Y (2006) Role of linker histone in chromatin structure and function: H1 stoichiometry and nucleo-some repeat length. Chromosome Res 14: 17-25
    • (2006) Chromosome Res , vol.14 , pp. 17-25
    • Woodcock, C.L.1    Skoultchi, A.I.2    Fan, Y.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.