메뉴 건너뛰기




Volumn 160, Issue 10, 2009, Pages 829-837

Proteomic analysis of Marinobacter hydrocarbonoclasticus SP17 biofilm formation at the alkane-water interface reveals novel proteins and cellular processes involved in hexadecane assimilation

Author keywords

Alkane degradation; Biofilm; Marinobacter hydrocarbonoclasticus SP17; Proteomic; Type VI secretion system

Indexed keywords

ACETIC ACID; ALKANE; HEXADECANE; WATER;

EID: 71049182588     PISSN: 09232508     EISSN: 17697123     Source Type: Journal    
DOI: 10.1016/j.resmic.2009.09.010     Document Type: Article
Times cited : (40)

References (35)
  • 2
    • 0040366266 scopus 로고    scopus 로고
    • Adhesion of Acinetobacter venetianus to diesel fuel droplets studied with in situ electrochemical and molecular probes
    • Baldi F., Ivosevic N., Minacci A., Pepi M., Fani R., Svetlicic V., et al. Adhesion of Acinetobacter venetianus to diesel fuel droplets studied with in situ electrochemical and molecular probes. Appl. Environ. Microbiol. 65 (1999) 2041-2048
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 2041-2048
    • Baldi, F.1    Ivosevic, N.2    Minacci, A.3    Pepi, M.4    Fani, R.5    Svetlicic, V.6
  • 3
    • 0034016917 scopus 로고    scopus 로고
    • Isolation of adherent polycyclic aromatic hydrocarbon (PAH)-degrading bacteria using PAH-sorbing carriers
    • Bastiaens L., Springael D., Wattiau P., Harms H., DeWachter R., Verachtert H., et al. Isolation of adherent polycyclic aromatic hydrocarbon (PAH)-degrading bacteria using PAH-sorbing carriers. Appl. Environ. Microbiol. 66 (2000) 1834-1843
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 1834-1843
    • Bastiaens, L.1    Springael, D.2    Wattiau, P.3    Harms, H.4    DeWachter, R.5    Verachtert, H.6
  • 4
    • 0034802295 scopus 로고    scopus 로고
    • Evidence for interfacial uptake in hexadecane degradation by Rhodococcus equi: the importance of cell flocculation
    • Bouchez-Naitali M., Blanchet D., Bardin V., and Vandecasteele J.-P. Evidence for interfacial uptake in hexadecane degradation by Rhodococcus equi: the importance of cell flocculation. Microbiology 147 (2001) 2537-2543
    • (2001) Microbiology , vol.147 , pp. 2537-2543
    • Bouchez-Naitali, M.1    Blanchet, D.2    Bardin, V.3    Vandecasteele, J.-P.4
  • 5
    • 0029893052 scopus 로고    scopus 로고
    • Mechanism of microbial utilization of biphenyl sorbed to polyacrylic beads
    • Calvillo Y.M., and Alexander M. Mechanism of microbial utilization of biphenyl sorbed to polyacrylic beads. Appl. Microbiol. Biotechnol. 45 (1996) 383-390
    • (1996) Appl. Microbiol. Biotechnol. , vol.45 , pp. 383-390
    • Calvillo, Y.M.1    Alexander, M.2
  • 6
    • 34248385250 scopus 로고    scopus 로고
    • Genome and proteome of long-chain alkane degrading Geobacillus thermodenitrificans NG80-2 isolated from a deep-subsurface oil reservoir
    • Feng L., Wang W., Cheng J., Ren Y., Zhao G., Gao C., et al. Genome and proteome of long-chain alkane degrading Geobacillus thermodenitrificans NG80-2 isolated from a deep-subsurface oil reservoir. Proc. Natl. Acad. Sci. U.S.A. 104 (2007) 5602-5607
    • (2007) Proc. Natl. Acad. Sci. U.S.A. , vol.104 , pp. 5602-5607
    • Feng, L.1    Wang, W.2    Cheng, J.3    Ren, Y.4    Zhao, G.5    Gao, C.6
  • 7
    • 48449086943 scopus 로고    scopus 로고
    • The bacterial type VI secretion machine: yet another player for protein transport across membranes
    • Filloux A., Hachani A., and Bleves S. The bacterial type VI secretion machine: yet another player for protein transport across membranes. Microbiology 154 (2008) 1570-1583
    • (2008) Microbiology , vol.154 , pp. 1570-1583
    • Filloux, A.1    Hachani, A.2    Bleves, S.3
  • 8
    • 0026688315 scopus 로고
    • Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium
    • Gauthier M.J., Lafay B., Christen R., Fernandez L., Acquaviva M., Bonin P., et al. Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium. Int. J. Syst. Bacteriol. 42 (1992) 568-576
    • (1992) Int. J. Syst. Bacteriol. , vol.42 , pp. 568-576
    • Gauthier, M.J.1    Lafay, B.2    Christen, R.3    Fernandez, L.4    Acquaviva, M.5    Bonin, P.6
  • 9
    • 0035989562 scopus 로고    scopus 로고
    • Oleiphilaceae fam. nov., to include Oleiphilus messinensis gen. nov., sp. nov., a novel marine bacterium that obligately utilizes hydrocarbons
    • Golyshin P.N., Chernikova T.N., Abraham W.-R., Lünsdorf H., Timmis K.N., and Yakimov M.M. Oleiphilaceae fam. nov., to include Oleiphilus messinensis gen. nov., sp. nov., a novel marine bacterium that obligately utilizes hydrocarbons. Int. J. Syst. Evol. Microbiol. 52 (2002) 901-911
    • (2002) Int. J. Syst. Evol. Microbiol. , vol.52 , pp. 901-911
    • Golyshin, P.N.1    Chernikova, T.N.2    Abraham, W.-R.3    Lünsdorf, H.4    Timmis, K.N.5    Yakimov, M.M.6
  • 10
    • 0028816582 scopus 로고
    • Bioavailability of sorbed 3-chlorodibenzofuran
    • Harms H., and Zehnder A.J.B. Bioavailability of sorbed 3-chlorodibenzofuran. Appl. Environ. Microbiol. 61 (1995) 27-33
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 27-33
    • Harms, H.1    Zehnder, A.J.B.2
  • 11
    • 0036208369 scopus 로고    scopus 로고
    • Statistical analysis of Pseudomonas aeruginosa biofilm development: impact of mutations in genes involved in twitching motility, cell-to-cell signaling, and stationary-phase sigma factor expression
    • Heydorn A., Ersbøll B., Kato J., Hentzer M., Parsek M.R., Tolker-Nielsen T., et al. Statistical analysis of Pseudomonas aeruginosa biofilm development: impact of mutations in genes involved in twitching motility, cell-to-cell signaling, and stationary-phase sigma factor expression. Appl. Environ. Microbiol. 68 (2002) 2008-2017
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 2008-2017
    • Heydorn, A.1    Ersbøll, B.2    Kato, J.3    Hentzer, M.4    Parsek, M.R.5    Tolker-Nielsen, T.6
  • 12
    • 1642496893 scopus 로고    scopus 로고
    • Evaluation of bacterial strategies to promote the bioavailability of polycyclic aromatic hydrocarbons
    • Johnsen A.R., and Karlson U. Evaluation of bacterial strategies to promote the bioavailability of polycyclic aromatic hydrocarbons. Appl. Microbiol. Biotechnol. 63 (2004) 452-459
    • (2004) Appl. Microbiol. Biotechnol. , vol.63 , pp. 452-459
    • Johnsen, A.R.1    Karlson, U.2
  • 13
    • 16644396090 scopus 로고    scopus 로고
    • Principles of microbial PAH-degradation in soil
    • Johnsen A.R., Wick L.Y., and Harms H. Principles of microbial PAH-degradation in soil. Environ. Pollut. 133 (2005) 71-84
    • (2005) Environ. Pollut. , vol.133 , pp. 71-84
    • Johnsen, A.R.1    Wick, L.Y.2    Harms, H.3
  • 14
    • 0033975879 scopus 로고    scopus 로고
    • Characterization and role of tbuX in utilization of toluene by Ralstonia pickettii PKO1
    • Kahng H.Y., Byrne A.M., Olsen R.H., and Kukor J.J. Characterization and role of tbuX in utilization of toluene by Ralstonia pickettii PKO1. J. Bacteriol. 182 (2000) 1232-1242
    • (2000) J. Bacteriol. , vol.182 , pp. 1232-1242
    • Kahng, H.Y.1    Byrne, A.M.2    Olsen, R.H.3    Kukor, J.J.4
  • 15
    • 39749201900 scopus 로고    scopus 로고
    • Cytoplasmic wax ester accumulation during biofilm-driven substrate assimilation at the alkane-water interface by Marinobacter hydrocarbonoclasticus SP17
    • Klein B., Grossi V., Bouriat P., Goulas P., and Grimaud R. Cytoplasmic wax ester accumulation during biofilm-driven substrate assimilation at the alkane-water interface by Marinobacter hydrocarbonoclasticus SP17. Res. Microbiol. 159 (2008) 137-144
    • (2008) Res. Microbiol. , vol.159 , pp. 137-144
    • Klein, B.1    Grossi, V.2    Bouriat, P.3    Goulas, P.4    Grimaud, R.5
  • 16
    • 0013894468 scopus 로고
    • The role and control of the glyoxylate cycle in Escherichia coli
    • Kornberg H.L. The role and control of the glyoxylate cycle in Escherichia coli. Biochem. J. 99 (1966) 1-11
    • (1966) Biochem. J. , vol.99 , pp. 1-11
    • Kornberg, H.L.1
  • 20
    • 0031724115 scopus 로고    scopus 로고
    • Flagellar and twitching motility are necessary for Pseudomonas aeruginosa biofilm development
    • O'Toole G.A., and Kolter R. Flagellar and twitching motility are necessary for Pseudomonas aeruginosa biofilm development. Mol. Microbiol. 30 (1998) 295-304
    • (1998) Mol. Microbiol. , vol.30 , pp. 295-304
    • O'Toole, G.A.1    Kolter, R.2
  • 21
    • 60149111839 scopus 로고    scopus 로고
    • Pili in Gram-negative and Gram-positive bacteria - structure, assembly and their role in disease
    • Proft T., and Baker E.N. Pili in Gram-negative and Gram-positive bacteria - structure, assembly and their role in disease. Cell. Mol. Life Sci. 66 (2009) 613-635
    • (2009) Cell. Mol. Life Sci. , vol.66 , pp. 613-635
    • Proft, T.1    Baker, E.N.2
  • 22
    • 3242890783 scopus 로고    scopus 로고
    • Use of proteomics to identify novel virulence determinants that are required for Edwardsiella tarda pathogenesis
    • Rao P.S., Yamada Y., Tan Y.P., and Leung K.Y. Use of proteomics to identify novel virulence determinants that are required for Edwardsiella tarda pathogenesis. Mol. Microbiol. 53 (2004) 573-586
    • (2004) Mol. Microbiol. , vol.53 , pp. 573-586
    • Rao, P.S.1    Yamada, Y.2    Tan, Y.P.3    Leung, K.Y.4
  • 23
    • 20344405225 scopus 로고    scopus 로고
    • Fluorene and phenanthrene uptake by Pseudomonas putida ATCC 17514: kinetics and physiological aspects
    • Rodrigues A.C., Wuertz S., Brito A.G., and Melo L.F. Fluorene and phenanthrene uptake by Pseudomonas putida ATCC 17514: kinetics and physiological aspects. Biotechnol. Bioeng. 90 (2005) 281-289
    • (2005) Biotechnol. Bioeng. , vol.90 , pp. 281-289
    • Rodrigues, A.C.1    Wuertz, S.2    Brito, A.G.3    Melo, L.F.4
  • 24
    • 33744762185 scopus 로고    scopus 로고
    • Proteomic insights into metabolic adaptations in Alcanivorax borkumensis induced by alkane utilization
    • Sabirova J.S., Ferrer M., Regenhardt D., Timmis K.N., and Golyshin P.N. Proteomic insights into metabolic adaptations in Alcanivorax borkumensis induced by alkane utilization. J. Bacteriol. 188 (2006) 3763-3773
    • (2006) J. Bacteriol. , vol.188 , pp. 3763-3773
    • Sabirova, J.S.1    Ferrer, M.2    Regenhardt, D.3    Timmis, K.N.4    Golyshin, P.N.5
  • 25
    • 0037198693 scopus 로고    scopus 로고
    • A component of innate immunity prevents bacterial biofilm development
    • Singh P.K., Parsek M.R., Greenberg E.P., and Welsh M.J. A component of innate immunity prevents bacterial biofilm development. Nature 417 (2002) 552-555
    • (2002) Nature , vol.417 , pp. 552-555
    • Singh, P.K.1    Parsek, M.R.2    Greenberg, E.P.3    Welsh, M.J.4
  • 26
    • 4544338671 scopus 로고    scopus 로고
    • Effects of hydrocarbon structure on fatty acid, fatty alcohol, and beta-hydroxy acid composition in the hydrocarbon-degrading bacterium Marinobacter hydrocarbonoclasticus
    • Soltani M., Metzger P., and Largeau C. Effects of hydrocarbon structure on fatty acid, fatty alcohol, and beta-hydroxy acid composition in the hydrocarbon-degrading bacterium Marinobacter hydrocarbonoclasticus. Lipids 39 (2004) 491-505
    • (2004) Lipids , vol.39 , pp. 491-505
    • Soltani, M.1    Metzger, P.2    Largeau, C.3
  • 27
    • 0036001073 scopus 로고    scopus 로고
    • Enrichment versus biofilm culture: a functional and phylogenetic comparison of polycyclic aromatic hydrocarbon-degrading microbial communities
    • Stach J.E., and Burns R.G. Enrichment versus biofilm culture: a functional and phylogenetic comparison of polycyclic aromatic hydrocarbon-degrading microbial communities. Environ. Microbiol. 4 (2002) 169-182
    • (2002) Environ. Microbiol. , vol.4 , pp. 169-182
    • Stach, J.E.1    Burns, R.G.2
  • 28
    • 39149100341 scopus 로고    scopus 로고
    • Physiological heterogeneity in biofilms
    • Stewart P.S., and Franklin M.J. Physiological heterogeneity in biofilms. Nat. Rev. Microbiol. 6 (2008) 199-210
    • (2008) Nat. Rev. Microbiol. , vol.6 , pp. 199-210
    • Stewart, P.S.1    Franklin, M.J.2
  • 29
    • 60849116153 scopus 로고    scopus 로고
    • Protein secretion systems in bacterial-host associations, and their description in the gene ontology
    • 1-9
    • Tseng T.-T., Tyler B.M., and Setubal J.C. Protein secretion systems in bacterial-host associations, and their description in the gene ontology. BMC Microbiol. 9 Suppl. 1 (2009) S2 1-9
    • (2009) BMC Microbiol. , vol.9 , Issue.SUPPL. 1
    • Tseng, T.-T.1    Tyler, B.M.2    Setubal, J.C.3
  • 30
    • 2642522855 scopus 로고    scopus 로고
    • Crystal structure of the long-chain fatty acid transporter FadL
    • van den Berg B., Black P.N., Clemons Jr. W.M., and Rapoport T.A. Crystal structure of the long-chain fatty acid transporter FadL. Science 304 (2004) 1506-1509
    • (2004) Science , vol.304 , pp. 1506-1509
    • van den Berg, B.1    Black, P.N.2    Clemons Jr., W.M.3    Rapoport, T.A.4
  • 32
    • 0028924094 scopus 로고
    • Identification of a membrane protein and a truncated LysR-type regulator associated with the toluene degradation pathway in Pseudomonas putida F1
    • Wang Y., Rawlings M., Gibson D.T., Labbe D., Bergeron H., Brousseau R., et al. Identification of a membrane protein and a truncated LysR-type regulator associated with the toluene degradation pathway in Pseudomonas putida F1. Mol. Gen. Genet. 246 (1995) 570-579
    • (1995) Mol. Gen. Genet. , vol.246 , pp. 570-579
    • Wang, Y.1    Rawlings, M.2    Gibson, D.T.3    Labbe, D.4    Bergeron, H.5    Brousseau, R.6
  • 35
    • 10444260518 scopus 로고    scopus 로고
    • Isolation and characterization of a novel sphingomonad capable of growth with chrysene as sole carbon and energy source
    • Willison J.C. Isolation and characterization of a novel sphingomonad capable of growth with chrysene as sole carbon and energy source. FEMS Microbiol. Lett. 241 (2004) 143-150
    • (2004) FEMS Microbiol. Lett. , vol.241 , pp. 143-150
    • Willison, J.C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.