Arctic-boreal sibling species of Paranaitis (Polychaeta, Phyllodocidae)

Marine Biology Research

Volumn 5, Issue 4, 2009, Pages 315-327

  Nygren, Arne ^a   Eklöf, Jenny ^a   Pleijel, Fredrik ^a  

^a UNIVERSITY OF GOTHENBURG   (Sweden)

Author keywords

Molecular data; New species; Paranaitis; Phyllodocidae; Phylogenetic analysis; Taxonomy

Indexed keywords

ANNELID; MITOCHONDRIAL DNA; MOLECULAR ANALYSIS; MORPHOLOGY; NEW SPECIES; PHYLOGENETICS; TAXONOMY;

ARCTIC;

PARANAITIS; PARANAITIS WAHLBERGI; PHYLLODOCIDA; PHYLLODOCIDAE; POLYCHAETA;

EID: 70449553201     PISSN: 17451000     EISSN: 17451019     Source Type: Journal    
DOI: 10.1080/17451000802441301     Document Type: Article

References (46)

1. Bastrop R, Blank M. 2006. Multiple invasions a polychaete genus enters the Baltic Sea. Biological Invasions 8:1195-1200
2. Bastrop R, Juörss K, Sturmbauer C. 1998. Cryptic species in a marine polychaete and their independent introduction from North America to Europe. Molecular Biology and Evolution 15:97-103.
3. Bely AE, Wray GA. 2004. Molecular phylogeny of naidid worms (Annelida: Clitellata) based on cytochrome oxidase I. Molecular Phylogenetics and Evolution 30:50-63.
4. Bickford D, Lohman DJ, Sodhi NS, Ng PKL, Meier R, Winker K. 2007. Cryptic species as a window on diversity and conservation. Trends in Ecology and Evolution 22:148-155
5. Bleidorn C, Eeckhaut I, Podsiadlowski L, Schult N, McHugh D, Halanych KM. 2007. Mitochondrial genome and nuclear sequence data support Myzostomida as part of the annelid radiation. Molecular Biology and Evolution 24:1690-1701
6. Bonse S, Schmidt H, Eibye-Jacobsen D, Westheide W. 1996. Eulalia viridis (Polychaeta: Phyllodocidae) is a complex of two species in northern Europe: results from biochemical and morphological analyses. Cahiers de Biologie Marine 37:33-48.
7. Brown S, Rouse G, Hutchings P, Colgan D. 1999. Assessing the usefulness of histone H3, U2 snRNA and 28S rDNA in analyses of polychaete relationships. Australian Journal of Zoology 47:499-516.
8. Chen CA, Chen C-P, Fan T-Y, Yu J-K, Hsieh H-L. 2002. Nucleotide sequences of ribosomal internal transcribed spacers and their utility in distinguishing closely related Perinereis polychaetes (Annelida; Polychaeta; Nereididiae). Marine Biotechnology 4:17-29.
9. Chevaldonné P, Jollivet D, Desbruyères D, Lutz RA, Vrijenhoek RC. 2002. Sister-species of eastern Pacific hydrothermal vent worms (Ampharetidae, Alvinellidae, Vestimentifera) provide new mitochondrial COI clock calibration. Cahiers de Biologie Marine 43:367-370
10. Clement M, Posada D, Crandall KA. 2000. TCS: a computer program to estimate gene genealogies. Molecular Ecology 9:1657-1659
11. Drake CA, McCarthy DA, von Dohlen CD. 2007. Molecular relationships and species divergence among Phragmatopoma spp. (Polychaeta: Sabellariidae) in the Americas. Marine Biology 150:345-358
12. Farris J, Albert VA, KällersjoöM, Libscomb D, Kluge AG. 1996. Parsimony jackknifing outperforms neighbor-joining. Cladistics 12:99-124.
13. Ferguson JWH. 2002. On the use of genetic divergence for identifying species. Biological Journal of the Linnean Society 75:509-516
14. Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R. 1994. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology Biotechnology 3:294-299
15. Gelman A, Roberts GO, Gilks WR. 1995. Efficient metropolis jumping rules. In: Bernardo JM, Berger JO, Dawid AP, Smith AFM, editors. Bayesian Statistics 5. Oxford: Oxford University Press. p 599-607.
16. Hartmann-Schröder G. 1996. Annelida, Borstenwuörmer, Polychaeta. 2., neubearbeitete Auflage. Tierwelt Deutschlands 58:1-648.
17. Hebert PDN, Stoeckle MY, Zemiak TS, Francis CM. 2004. Identification of birds through DNA barcodes. PLoS Biology 2:e312.
18. Kato T, Pleijel F. 2003. A revision of Paranaitis Southern, 1914 (Polychaeta: Phyllodocidae). Zoological Journal of the Linnean Society 138:379-429.
19. Knowlton N. 1993. Sibling species in the sea. Annual Review of Ecology and Systematics 24:189-216.
20. Knowlton N. 2000. Molecular genetic analyses of species boundaries in the sea. Hydrobiologia 420:73-90.
21. Knowlton N, Weigt LA, Solórzano LA, Mills DK, Bermingham E. 1993. Divergence in proteins, mitochondrial DNA, and reproductive compatibility across the Isthmus of Panama. Science 260:1629-1632
22. Malmgren AJ. 1865. Nordiska Hafs-Annulater. Oöfversigt af Kongl. Vetenskapsakademiens förhandlingar 22:181-192
23. Malmgren AJ. 1867. Annulata Polychaeta Spetsbergiae, Groenlandiae, Islandiae et Scandinaviae hactenus cognita. Oöfversigt af Kongl. Vetenskapsakademiens förhandlingar 24:127-235.
24. Nygren A, Pleijel F, Sundberg P. 2005. Genetic relationships between Nereimyra punctata and N. woodsholea (Hesionidae, Polychaeta). Journal of Zoological Systematics and Evolutionary Research 43:273-276
25. Nygren A, Sundberg P. 2003. Phylogeny and evolution of reproductive modes in Autolytinae (Syllidae, Annelida). Molecular Phylogenetics and Evolution 29:235-249
26. Nylander JAA, Wilgenbusch JC, Warren DL, Swofford DL. 2008. AWTY (Are WE There Yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics. Bioinformatics 24:581-583
27. Rsted AS. 1842. Udtag af en beskrivelse av Grønlands Annulata dorsibranchiata. Naturhistorisk Tidsskrift 4:109-127
28. Rsted AS. 1843. Annulatorum danicorum conspectus. Fasc. 1. Maricolæ. Copenhagen. Pleijel F. 1991. Phylogeny and classification of the Phyllodocidae (Polychaeta). Zoologica Scripta 20:225-261
29. Pleijel F. 1993. Polychaeta. Phyllodocidae. Marine Invertebrates of Scandinavia 8:1-159.
30. Pleijel F, Dales RP. 1991. Polychaetes: British Phyllodocoideans, Typhloscolecoideans and Tompteroideans. Synopses of the British Fauna (New series) 45:1-206.
31. Quatrefages A. 1866. Histoire naturelle des Annelés marins et d'eau douce. Annélides et Géphyriens. Librarie Encyclopédique de Roret, Paris.
32. Rice SA, Karl S, Rice KA. 2008. The Polydora cornuta complex (Annelida: Polychaeta) contains populations that are reproductively isolated and genetically distinct. Invertebrate Biology 127:45-64.
33. Roberts GO, Gelman A, Gilks WR. 1994. Weak convergence and optimal scaling of random walk Metropolis algorithms. Research Report 94.16, Statistical Laboratory, University of Cambridge.
34. Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574
35. Rubinoff D. 2006. Utility of mitochondrial DNA barcodes in species conservation. Conservation Biology 20:1026-1033
36. Rubinoff D, Cameron S, Will K. 2006. A genomic perspective on the shortcomings of mitochondrial DNA for 'Barcoding' identification. Journal of Heredity 97:581-594
37. Rubinoff D, Holland BS. 2005. Between two extremes: mitochondrial DNA is neither the panacea nor the nemesis of phylogenetic and taxonomic inference. Systematic Biology 54:952-961
38. Sars M. 1835. Beskrivelser og iagttagelser over nogle maerkelige eller nye i havet ved den bergenske kyst levende dyr af polypernes, acephalernes, radiaternes, annelidernes og molluskernes classer, med en kort oversigt over de hidtil af forfatteren sammesteds fundne arter og deres forekommen. Bergen: Thorstein Hallegers Forlag hos Chr. Dahl.
39. Schulze SR, Rice SA, Simon JL, Karl SA. 2000. Evolution of poecilogony and the biogeography of North American populations of the polychaete Streblospio. Evolution 54:1247-1259
40. Slatkin M. 1993. Isolation by distance in equilibrium and nonequilibrium populations. Evolution 47:264-279
41. Southern R. 1914. Clare Island Survey. Archiannelida and Polychaeta. Proceedings of the Royal Irish Academy 31:1-160.
42. Swofford DL. 2002. PAUP*. Phylogenetic Analysis Using Parsimony (* and other methods). Version 4. Sinauer Associates, Sunderland, Massachusetts.
43. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 25:4876-4882
44. Westheide W, Hass-Cordes E. 2001. Molecular taxonomy: Description of a cryptic Petitia species (Polychaeta: Syllidae) from the island of Mahé (Seychelles, Indian Ocean) using RAPD markers and ITS2 sequences. Journal of Zoological Systematics and Evolutionary Research 39:103-111
45. Wiklund H, Glover AG, Johannessen PJ, Dahlgren TG. 2009. Cryptic speciation at organic-rich marine habitats: A new bacteriovore annelid from whale-fall and fish farms in the North East Atlantic. Zoological Journal of the Linnean Society 155:774-785
46. Wilgenbusch JC, Warren DL, Swofford DL. 2004. AWTY: A system for graphical exploration of MCMC convergence in Bayesian phylogenetic inference. http://ceb.csit.fsu.edu/awty.