Characterization and identification of a novel marine Streptomyces sp. produced antibacterial substance

Marine Biotechnology

Volumn 11, Issue 6, 2009, Pages 717-724

  Lu, Yingjian ^a   Dong, Xin ^a   Liu, Shu ^a   Bie, Xiaomei ^a  

^a NANJING AGRICULTURAL UNIVERSITY   (China)

Author keywords

Antibacterial substance; Identification; Sisomicin; Streptomyces

Indexed keywords

16S RRNA GENE; ACTIVE MOLECULES; ANTI-BACTERIAL ACTIVITY; ANTI-MICROBIAL ACTIVITY; ANTIBACTERIAL SUBSTANCE; BACILLUS CEREUS; BIOCHEMICAL CHARACTERISTICS; CELL WALLS; CHEMICAL COMPONENT; COASTAL CITIES; IDENTIFICATION; ION FRAGMENTS; JIANGSU PROVINCE; LIQUID CHROMATOGRAPHY-MASS SPECTROMETRY; MARINE MICROBE; NUCLEOTIDE SEQUENCES; PHARMACEUTICAL INDUSTRY; RETENTION TIME; RRNA GENES; SISOMICIN; STREPTOMYCES; STREPTOMYCES SP;

BACTERIOLOGY; BIODIVERSITY; CHROMATOGRAPHIC ANALYSIS; DRUG PRODUCTS PLANTS; ESCHERICHIA COLI; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; NUCLEAR MAGNETIC RESONANCE; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; RNA;

BACTERIA;

ANTIINFECTIVE AGENT; PRIMER DNA; RNA 16S; SISOMICIN;

BACTERIUM; BIOCHEMISTRY; BIODIVERSITY; BIOTECHNOLOGY; IDENTIFICATION METHOD; LIQUID CHROMATOGRAPHY; MARINE TECHNOLOGY; MASS SPECTROMETRY; MORPHOLOGY; NUCLEAR MAGNETIC RESONANCE; PHARMACEUTICAL INDUSTRY; PHYSIOLOGY; RNA; SOIL MICROORGANISM;

ARTICLE; CHEMISTRY; CHINA; CLUSTER ANALYSIS; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; MOLECULAR GENETICS; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; NUCLEOTIDE SEQUENCE; PHYLOGENY; SEQUENCE HOMOLOGY; STREPTOMYCES;

ANTI-BACTERIAL AGENTS; BASE SEQUENCE; CHINA; CHROMATOGRAPHY, LIQUID; CLUSTER ANALYSIS; DNA PRIMERS; MAGNETIC RESONANCE SPECTROSCOPY; MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY; SISOMICIN; STREPTOMYCES;

ASIA; CHINA; EURASIA; FAR EAST; JIANGSU;

BACILLUS CEREUS; ESCHERICHIA COLI; STREPTOMYCES; STREPTOMYCES FRADIAE; STREPTOMYCES SP.;

EID: 70449529783     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-009-9186-1     Document Type: Article

References (33)

1. Berdy J (2005) Bioactive microbial metabolites. J Antibiot (Tokyo) 58:1-26.
2. Bruntner C, Binder T, Pathom-aree W, Goodfellow M, Bull AT, Potterat O, Puder C, Horer S, Schmid A, Bolek W (2005) Frigocyclinone, a novel angucyclinone antibiotic produced by a Streptomyces griseus strain from Antarctica. J Antibiot (Tokyo) 58:346-349.
3. Buchanan RE, Gibbons NE (1974) Bergey's manual of determinative bacteriology, 7th edn, London. Bergey Taxon 24, pp 377-378.
4. Cragg GM, Kingston DGI, Newman DJ (eds) (2005) Anticancer agents from natural products. Taylor & Francis, Boca Raton.
5. Crowe CC, Sanders E (1973) Sisomicin: evaluation in vitro and comparison with gentamicin and tobramycin. Antimicrob Ag Chemother 3:24-28.
6. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
7. Gyselmymck AM, Forrey A, Cutler R (1971) Pharmacokinetics of gentamicin: distribution and plasma and renal clearance. J Infect Dis 124:570-576.
8. Hu PF, Chess EK, Brynjelsen S, Jakubowski G, Melchert J, Hammond RB (2000) Collisionally activated dissociations of aminocyclitol-aminoglycoside antibiotics and their application in the identification of a new compound in tobramycin samples. J Am Soc Mass Spectrom 11:200-209.
9. Jensen PR, Gontang E, Mafnas C, Mincer TJ, Fenical W (2005) Culturable marine actinomycete diversity from tropical Pacific Ocean sediments. Environ Microbiol 7:1039-1048.
10. Jiao ZQ, Liu XM (2001) The new hot spot of classification and identification of bacteria: intergenic spacer of 16S-23S rDNA. Chinese Microbiol 28:85-89.
11. Kim TK, Garson MJ, Fuerst JA (2005) Marine actinomycetes related to the alinospora group from the Great Barrier Reef sponge Pseudoceratina clavata. Environ Microbiol 7:509-518.
12. Kin SL (2006) Discovery of novel metabolites from marine actinomycetes. Curr Opin Microbiol 9:245-251.
13. Klasterky J, Henri A, Hensgens C, Vandenborre L, Daneau D (1973) Antipseudomonal drugs: comparative study of gentamicin, sisomicin and tobramycin in vitro and in human volunteers. Eur J Cancer 9:641-648.
14. Kokare CR, Mahadik KR, Kadam SS, Chopade BA (2004) Isolation, characterization and antimicrobial activity of marine halophilic Actinopolyspora species AH1 from the west coast of India. Curr Sci 86:593-597.
15. Levison ME, Kaye D (1974) In vitro comparison of four aminoglycoside antibiotics: sisomicin, gentamicin, tobramycin, and BB-K8. Antimicrob Ag Chemother 5:667-669.
16. Liu S, Lu YJ, Lu ZX (2007) Antibacterial activity and property of the fermentation product of marine Streptomyces sp. GB-2. Chinese J Biotechnol 23:1077-1081.
17. Macherla VR, Liu J, Bellows C, Teisan S, Lam KS, Potts BCM (2005) Glaciapyrroles A, B and C, pyrrolosesquiterpenes from a Streptomyces sp. isolated from an Alaskan marine sediment. J Nat Prod 68:780-783.
18. Magarvey NA, Keller JM, Bernan V, Dworkin M, Sherman DH (2004) Isolation and characterization of novel marine-derived actinomycete taxa rich in bioactive metabolites. Appl Environ Microbiol 70:7520-7529.
19. Mann J (2001) Natural products as immunosuppressive agents. Nat Prod Rep 18:417-430.
20. Maskey RP, Sevvana M, Uson I, Helmke E, Laatsch H (2004) Gutingimycin: a highly complex metabolite from a marine streptomycete. Angew Chem Int Ed Engl 43:1281-1283.
21. Moran MA, Miller WL (2007) Resourceful heterotrophs make the most of light in the coastal ocean. Nat Rev Microbiol 5:792-800.
22. Mincer TJ, Jensen PR, Kauffman CA, Fenical W (2002) Widespread and persistent populations of a major new marine actinomycete taxon in ocean sediments. Appl Environ Microbiol 68(10):5005-5011.
23. Sanchez LJM, Martinez IM, Perez BJ, Fernandez PJL, Canedo HLM (2003) New Cytotoxic indolic metabolites from a marine Streptomyces. J Nat Prod 66:863-864.
24. Soria-Mercado IE, Prieto-Davo A, Jensen PR, Fenical W (2005) Antibiotic terpenoid chloro-dihydroquinones from a new marine actinomycete. J Nat Prod 68:904-910.
25. Staneck JL, Roberts GD (1974) Simplified approach to identification of aerobic actinomycetes by thin layer chromatography. Appl Microbiol 28:226-231.
26. Strohl WR (2004) Antimicrobials in microbial diversity and bioprospecting. ASM, Washington, DC, pp 336-355.
27. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acid Res 22:4673-4680.
28. Xu LH, Lee WJ (2006) Actinomycete systematic-principle, methods and practice. Science, Beijing, pp 381-387.
29. Waitz JA, Moss EL, Drube CG, Weinstein MJ (1972) Comparative activity of sisomicin, gentamicin, kanamycin and tobramycin. Antimicrob Ag Chemother 2:31-436.
30. Watve MG, Tickoo R, Jog MM, Bhole BD (2001) How many antibiotics are produced by the genus Streptomyces. Arch Microbiol 176:386-390.
31. Zengler K, Toledo G, Rappe M, Elkins J, Mathur EJ, Short JM (2002) Cultivating the uncultured. Proc Natl Acad Sci U S A 99:15681-6.
32. Zhang L, An R, Wang J, Sun N, Zhang S, Hu J (2005) Exploring novel bioactive compounds from marine microbes. Curr Opin Microbiol 8:276-281.
33. Zheng ZH, Zeng W, Huang YJ (2000) Detection of antitumor and antimicrobial activities in marine organism associated actinomycetes isolated from the Taiwan Strait, China. FEMS Microbiol Lett 188:87-91.