-
2
-
-
48749119882
-
Nucleolus, ribosomes, and cancer
-
Montanaro L, Treré D, Derenzini M (2008) Nucleolus, ribosomes, and cancer. Am J Pathol 173: 301-310.
-
(2008)
Am J Pathol
, vol.173
, pp. 301-310
-
-
Montanaro, L.1
Treré, D.2
Derenzini, M.3
-
3
-
-
33646147563
-
Intergenic transcripts regulate the epigenetic state of rRNA genes
-
Mayer C, Schmitz K, Li J, Grummt I, Santoro R (2006) Intergenic transcripts regulate the epigenetic state of rRNA genes. Mol Cell 22: 351-361.
-
(2006)
Mol Cell
, vol.22
, pp. 351-361
-
-
Mayer, C.1
Schmitz, K.2
Li, J.3
Grummt, I.4
Santoro, R.5
-
4
-
-
48649106585
-
The structure of NoRC-associated RNA is crucial for targeting the chromatin remodelling complex NoRC to the nucleolus
-
Mayer C, Neubert M, Grummt I (2008) The structure of NoRC-associated RNA is crucial for targeting the chromatin remodelling complex NoRC to the nucleolus. EMBO Rep 9: 774-780.
-
(2008)
EMBO Rep
, vol.9
, pp. 774-780
-
-
Mayer, C.1
Neubert, M.2
Grummt, I.3
-
5
-
-
0023840603
-
Human ribosomal RNA genes: Orientation of the tandem array and conservation of the 5′ end
-
Worton RG, Sutherland J, Sylvester JE, Willard HF, Bodrug S, et al. (1988) Human ribosomal RNA genes: orientation of the tandem array and conservation of the 5′ end. Science 239: 64-68.
-
(1988)
Science
, vol.239
, pp. 64-68
-
-
Worton, R.G.1
Sutherland, J.2
Sylvester, J.E.3
Willard, H.F.4
Bodrug, S.5
-
6
-
-
0023387825
-
Primary processing of mammalian rRNA involves two adjacent cleavages and is not species specific
-
Kass S, Craig N, Sollner-Webb F (1987) Primary processing of mammalian rRNA involves two adjacent cleavages and is not species specific. Mol Cell Biol 7: 2891-2898.
-
(1987)
Mol Cell Biol
, vol.7
, pp. 2891-2898
-
-
Kass, S.1
Craig, N.2
Sollner-Webb, F.3
-
7
-
-
55849109584
-
The epigenetics of rRNA genes: From molecular to chromosome biology
-
McStay B, Grummt I (2008) The epigenetics of rRNA genes: from molecular to chromosome biology. Annu Rev Cell Dev Bio 24: 131-157.
-
(2008)
Annu Rev Cell Dev Bio
, vol.24
, pp. 131-157
-
-
McStay, B.1
Grummt, I.2
-
8
-
-
0024412564
-
Structure of the 5′-external transcribed spacer of the human ribosomal RNA gene
-
Renalier MH, Mazan S, Joseph N, Michot B, Bachellerie JP (1989) Structure of the 5′-external transcribed spacer of the human ribosomal RNA gene. FEBS Lett 249: 279-284.
-
(1989)
FEBS Lett
, vol.249
, pp. 279-284
-
-
Renalier, M.H.1
Mazan, S.2
Joseph, N.3
Michot, B.4
Bachellerie, J.P.5
-
9
-
-
0026034753
-
Secondary structure of the 5′ external transcribed spacer of vertebrate pr-rRNA. Presence of phylogenetically conserved features
-
Michot B, Bachellerie J (1991) Secondary structure of the 5′ external transcribed spacer of vertebrate pr-rRNA. Presence of phylogenetically conserved features. Eur J Biochem 195: 601-609.
-
(1991)
Eur J Biochem
, vol.195
, pp. 601-609
-
-
Michot, B.1
Bachellerie, J.2
-
10
-
-
0024730960
-
U3 small nuclear RNA can be psoralen-cross-linked in vivo to the 59 external transcribed spacer of pre-ribosomal-RNA
-
Maser RL, Calvet JP (1989) U3 small nuclear RNA can be psoralen-cross-linked in vivo to the 59 external transcribed spacer of pre-ribosomal-RNA. Proc Natl Acad Sci USA 86: 6523-6527.
-
(1989)
Proc Natl Acad Sci USA
, vol.86
, pp. 6523-6527
-
-
Maser, R.L.1
Calvet, J.P.2
-
11
-
-
0033360956
-
Concerted evolution: Molecular mechanism and biological implications
-
Liao D (1999) Concerted evolution: molecular mechanism and biological implications. Am J Hum Genet 64: 24-30.
-
(1999)
Am J Hum Genet
, vol.64
, pp. 24-30
-
-
Liao, D.1
-
12
-
-
0029804026
-
Human ribosomal RNA variants from a single individual and their expression in different tissues
-
Kuo BA, Gonzalez IL, Gillespie DA, Sylvester JE (1996) Human ribosomal RNA variants from a single individual and their expression in different tissues. Nucleic Acids Res 23: 4817-4824.
-
(1996)
Nucleic Acids Res
, vol.23
, pp. 4817-4824
-
-
Kuo, B.A.1
Gonzalez, I.L.2
Gillespie, D.A.3
Sylvester, J.E.4
-
13
-
-
0027267021
-
The sequence of 28S ribosomal RNA varies within and between human cell lines
-
Leffers H, Andersen AH (1993) The sequence of 28S ribosomal RNA varies within and between human cell lines. Nucleic Acids Res 21: 1449-1455.
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 1449-1455
-
-
Leffers, H.1
Andersen, A.H.2
-
14
-
-
0023243526
-
Clones of human ribosomal DNA containing the complete 18 S-rRNA and 28 S-rRNA genes. Characterization, a detailed map of the human ribosomal transcription unit and diversity among clones
-
Maden BEH, Dent CL, Farrell TE, Garde J, McCallum FS, et al. (1987) Clones of human ribosomal DNA containing the complete 18 S-rRNA and 28 S-rRNA genes. Characterization, a detailed map of the human ribosomal transcription unit and diversity among clones. Biochem J 246: 519-527.
-
(1987)
Biochem J
, vol.246
, pp. 519-527
-
-
Maden, B.E.H.1
Dent, C.L.2
Farrell, T.E.3
Garde, J.4
McCallum, F.S.5
-
15
-
-
0024584554
-
Clones containing variant forms of complete human rRNA genes. Characterization and sequence of their transcription initiation region
-
Renalier MH, Joseph N, Bachellerie JP (1989) Clones containing variant forms of complete human rRNA genes. Characterization and sequence of their transcription initiation region. FEBS Lett 247: 298-302.
-
(1989)
FEBS Lett
, vol.247
, pp. 298-302
-
-
Renalier, M.H.1
Joseph, N.2
Bachellerie, J.P.3
-
16
-
-
0026062589
-
A sequence dimorphism in a conserved domain of human 28S rRNA. Uneven distribution of variant genes among individuals. Differential expression in HeLa cells
-
Qu LH, Nicoloso M, Bachellerie J (1991) A sequence dimorphism in a conserved domain of human 28S rRNA. Uneven distribution of variant genes among individuals. Differential expression in HeLa cells. Nucleic Acids Res 19: 1015-1019.
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 1015-1019
-
-
Qu, L.H.1
Nicoloso, M.2
Bachellerie, J.3
-
17
-
-
0028149270
-
Proposed molecular and cellular mechanism for aminoglycoside ototoxicity
-
Hutchin T, Cortopassi G (1994) Proposed molecular and cellular mechanism for aminoglycoside ototoxicity. Antimicrob Agents Chemother 38: 2517-2520.
-
(1994)
Antimicrob Agents Chemother
, vol.38
, pp. 2517-2520
-
-
Hutchin, T.1
Cortopassi, G.2
-
18
-
-
0034114952
-
Maternally inherited hearing impairment
-
Van Camp G, Smith RJ (2000) Maternally inherited hearing impairment. Clin Genet 57: 409-414.
-
(2000)
Clin Genet
, vol.57
, pp. 409-414
-
-
Van Camp, G.1
Smith, R.J.2
-
19
-
-
70449451553
-
Involvement of the mitochondrial permeability transition in gentamicin ototoxicity
-
Dehne N, Rauen U, de Groot H, Lautermann J (2002) Involvement of the mitochondrial permeability transition in gentamicin ototoxicity. Hear Res 16: 947-55.
-
(2002)
Hear Res
, vol.16
, pp. 947-955
-
-
Dehne, N.1
Rauen, U.2
de Groot, H.3
Lautermann, J.4
-
21
-
-
44649152934
-
The role of long non-coding RNAs in chromatin structure and gene regulation: Variations on a theme
-
Umlauf D, Fraser P, Nagano T (2008) The role of long non-coding RNAs in chromatin structure and gene regulation: variations on a theme. Biol Chem 389: 323-331.
-
(2008)
Biol Chem
, vol.389
, pp. 323-331
-
-
Umlauf, D.1
Fraser, P.2
Nagano, T.3
-
22
-
-
38949188739
-
Non-coding RNAs regulating the transcriptional machinery
-
Barrandon C, Spiluttini B, Bensaude O (2008) Non-coding RNAs regulating the transcriptional machinery. Biol Cell 100: 83-95.
-
(2008)
Biol Cell
, vol.100
, pp. 83-95
-
-
Barrandon, C.1
Spiluttini, B.2
Bensaude, O.3
-
23
-
-
33846930357
-
Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript
-
Martianov I, Ramadass A, Serra Barros A, Chow N, Akoulitchev A (2007) Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript. Nature 445: 666-670.
-
(2007)
Nature
, vol.445
, pp. 666-670
-
-
Martianov, I.1
Ramadass, A.2
Serra Barros, A.3
Chow, N.4
Akoulitchev, A.5
-
24
-
-
55549098872
-
Stepwise chromatin remodelling by a cascade of transcription initiation of non-coding RNAs
-
Hirota K, Miyoshi T, Kugou K, Hoffman CS, Shibata T, et al. (2008) Stepwise chromatin remodelling by a cascade of transcription initiation of non-coding RNAs. Nature 456: 130-134.
-
(2008)
Nature
, vol.456
, pp. 130-134
-
-
Hirota, K.1
Miyoshi, T.2
Kugou, K.3
Hoffman, C.S.4
Shibata, T.5
-
25
-
-
38549146003
-
-
Zhang S, Wang J, Tseng H (2007) Basonuclin regulates a subset of ribosomal RNA genes in HaCaT cells. PLoS ONE 2: doi: 10.1371/ journal.pone. 0000902.
-
Zhang S, Wang J, Tseng H (2007) Basonuclin regulates a subset of ribosomal RNA genes in HaCaT cells. PLoS ONE 2: doi: 10.1371/ journal.pone. 0000902.
-
-
-
-
26
-
-
0036135638
-
UBF binding in vivo is not restricted to regulatory sequences within the vertebrate ribosomal DNA repeat
-
O'Sullivan AC, Sullivan GJ, McStay B (2002) UBF binding in vivo is not restricted to regulatory sequences within the vertebrate ribosomal DNA repeat. Mol Cell Biol 22: 657-668.
-
(2002)
Mol Cell Biol
, vol.22
, pp. 657-668
-
-
O'Sullivan, A.C.1
Sullivan, G.J.2
McStay, B.3
-
27
-
-
0032158929
-
Basonuclin, a zinc finger protein associated with epithelial expansion and proliferation
-
Tseng H (1998) Basonuclin, a zinc finger protein associated with epithelial expansion and proliferation. Front Biosci 3: D985-D988.
-
(1998)
Front Biosci
, vol.3
-
-
Tseng, H.1
-
28
-
-
4143112599
-
Gli proteins up-regulate the expression of basonuclin in Basal cell carcinoma
-
Cui C, Elsa T, Tian Q, Seykora JT, Grachtchouk M, et al. (2004) Gli proteins up-regulate the expression of basonuclin in Basal cell carcinoma. Cancer Res 64: 5651-5658.
-
(2004)
Cancer Res
, vol.64
, pp. 5651-5658
-
-
Cui, C.1
Elsa, T.2
Tian, Q.3
Seykora, J.T.4
Grachtchouk, M.5
-
29
-
-
46649110132
-
Mouse ribosomal RNA genes contain multiple differentially regulated variants
-
doi: 10.1371/journal.pone.00001834
-
Tseng H, Chou W, Wang J, Zhang X, Zhang S, et al. (2008) Mouse ribosomal RNA genes contain multiple differentially regulated variants. PLoS ONE 3: doi: 10.1371/journal.pone.00001834.
-
(2008)
PLoS ONE
, vol.3
-
-
Tseng, H.1
Chou, W.2
Wang, J.3
Zhang, X.4
Zhang, S.5
-
30
-
-
0021923144
-
Cytological demonstration of differential activity of rRNA gene clusters in different human tissues
-
de Capoa A, Marlekaj P, Baldini A, Rocchi M, Archidiacono N (1985) Cytological demonstration of differential activity of rRNA gene clusters in different human tissues. Hum Genet 69: 212-217.
-
(1985)
Hum Genet
, vol.69
, pp. 212-217
-
-
de Capoa, A.1
Marlekaj, P.2
Baldini, A.3
Rocchi, M.4
Archidiacono, N.5
-
31
-
-
0021890915
-
The transcriptional activity of individual ribosomal DNA gene clusters is modulated by serum concentration
-
de Capoa A, Marlekaj P, Baldini A, Archidiacono N, Rocchi M (1985) The transcriptional activity of individual ribosomal DNA gene clusters is modulated by serum concentration. J Cell Sci 74: 21-35.
-
(1985)
J Cell Sci
, vol.74
, pp. 21-35
-
-
de Capoa, A.1
Marlekaj, P.2
Baldini, A.3
Archidiacono, N.4
Rocchi, M.5
-
32
-
-
0026582653
-
Artificial steroid hormone response element generated by dam-methylation
-
Truss M, Bartsch J, Chalepakis G, Beato M (1992) Artificial steroid hormone response element generated by dam-methylation. Nucleic Acids Res 20: 1483-1486.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 1483-1486
-
-
Truss, M.1
Bartsch, J.2
Chalepakis, G.3
Beato, M.4
-
33
-
-
0029827292
-
Localization of nucleolin binding sites on human and mouse pre-ribosomal RNA
-
Serin G, Joseph G, Faucher C, Ghisolfi L, Bouche G, et al. (1996) Localization of nucleolin binding sites on human and mouse pre-ribosomal RNA. Biochimie 78: 530-538.
-
(1996)
Biochimie
, vol.78
, pp. 530-538
-
-
Serin, G.1
Joseph, G.2
Faucher, C.3
Ghisolfi, L.4
Bouche, G.5
-
34
-
-
0032754311
-
Molecular dissection of nucleolin's role in growth and cell proliferation: New insights
-
Srivastava M, Pollard HB (1999) Molecular dissection of nucleolin's role in growth and cell proliferation: new insights. FASEB J 13: 1911-1922.
-
(1999)
FASEB J
, vol.13
, pp. 1911-1922
-
-
Srivastava, M.1
Pollard, H.B.2
-
35
-
-
0023957688
-
Analysis of clustered point mutations in the human ribosomal RNA gene promoter by transient expression in vivo
-
Jones MH, Learned RM, Tjian R (1988) Analysis of clustered point mutations in the human ribosomal RNA gene promoter by transient expression in vivo. Proc Natl Acad Sci USA 85: 669-673.
-
(1988)
Proc Natl Acad Sci USA
, vol.85
, pp. 669-673
-
-
Jones, M.H.1
Learned, R.M.2
Tjian, R.3
-
37
-
-
33845545430
-
ARF negatively regulates rRNA transcription and inhibits UBF1 transcription factor phosphorylation
-
ARF negatively regulates rRNA transcription and inhibits UBF1 transcription factor phosphorylation. Oncogene 25: 7577-7586.
-
(2006)
Oncogene
, vol.25
, pp. 7577-7586
-
-
Ayrault, O.1
Andrique, L.2
Fauvin, D.3
Eymin, B.4
Gazzeri, S.5
-
38
-
-
33645235336
-
Involvement of the transcriptional factor E2F1 in the regulation of the rRNA promoter
-
Ayrault O, Andrique L, Séité P (2006) Involvement of the transcriptional factor E2F1 in the regulation of the rRNA promoter. Exp Cell Res 312: 1185-1193.
-
(2006)
Exp Cell Res
, vol.312
, pp. 1185-1193
-
-
Ayrault, O.1
Andrique, L.2
Séité, P.3
-
39
-
-
34347352117
-
Epigenetic programming of the rRNA promoter by MBD3
-
Brown SE, Szyf M (2007) Epigenetic programming of the rRNA promoter by MBD3. Mol Cell Biol 27: 4938-4952.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 4938-4952
-
-
Brown, S.E.1
Szyf, M.2
-
40
-
-
1342282969
-
Role of human ribosomal RNA (rRNA) promoter methylation and of methyl-CpG-binding protein MBD2 in the suppression of rRNA gene expression
-
Ghoshal K, Majumder S, Datta J, Motiwala T, Bai S, et al. (2004) Role of human ribosomal RNA (rRNA) promoter methylation and of methyl-CpG-binding protein MBD2 in the suppression of rRNA gene expression. J Biol Chem 279: 6783-6793.
-
(2004)
J Biol Chem
, vol.279
, pp. 6783-6793
-
-
Ghoshal, K.1
Majumder, S.2
Datta, J.3
Motiwala, T.4
Bai, S.5
-
41
-
-
0023805497
-
Functional cooperativity between transcription factors UBF1 and SL1 mediates human ribosomal RNA synthesis
-
Bell SP, Learned RM, Jantzen HM, Tijan R (1988) Functional cooperativity between transcription factors UBF1 and SL1 mediates human ribosomal RNA synthesis. Science 241: 1192-1197.
-
(1988)
Science
, vol.241
, pp. 1192-1197
-
-
Bell, S.P.1
Learned, R.M.2
Jantzen, H.M.3
Tijan, R.4
-
42
-
-
70449456251
-
Ribosomal RNA biogenesis as a target for anti-cancer drug design
-
O'Brien SE, Drygin D, Ho C, Lim JK, Lin A, et al. (2008) Ribosomal RNA biogenesis as a target for anti-cancer drug design. Proc AACR 49: 556.
-
(2008)
Proc AACR
, vol.49
, pp. 556
-
-
O'Brien, S.E.1
Drygin, D.2
Ho, C.3
Lim, J.K.4
Lin, A.5
-
43
-
-
70449383033
-
Quarfloxin (CX-3543) disrupts the Nucleolin/rDNA quadruplex complexes, inhibits the elongation by RNA Polymerase I and exhibits potent antitumor activity in models of cancer
-
Drygin D, Whitten JP, Rice WG, O'Brien S (2008) Quarfloxin (CX-3543) disrupts the Nucleolin/rDNA quadruplex complexes, inhibits the elongation by RNA Polymerase I and exhibits potent antitumor activity in models of cancer. Proc AACR 49: 784.
-
(2008)
Proc AACR
, vol.49
, pp. 784
-
-
Drygin, D.1
Whitten, J.P.2
Rice, W.G.3
O'Brien, S.4
-
44
-
-
47749133462
-
Promoter-wide hypermethylation of the ribosomal RNA gene promoter in the suicide brain
-
doi: 10.1371/journal/pone.0002085
-
McGowan PO, Sasaki A, Huang TCT, Unterberger A, Suderman M, et al. (2008) Promoter-wide hypermethylation of the ribosomal RNA gene promoter in the suicide brain. PLoS ONE 3(5): doi: 10.1371/journal/pone.0002085.
-
(2008)
PLoS ONE
, vol.3
, Issue.5
-
-
McGowan, P.O.1
Sasaki, A.2
Huang, T.C.T.3
Unterberger, A.4
Suderman, M.5
-
45
-
-
67349231662
-
AgNOR status in Down's syndrome infants and a plausible phenotype formation hypothesis
-
Demirtas H (2009) AgNOR status in Down's syndrome infants and a plausible phenotype formation hypothesis. Micron 40: 511-518.
-
(2009)
Micron
, vol.40
, pp. 511-518
-
-
Demirtas, H.1
-
46
-
-
0030779805
-
Establishment of human peripheral lung epithelial cell lines (HPL1) retaining differentiated characteristics and responsiveness to epidermal growth factor, hepatocyte growth factor, and transforming growth factor beta1
-
Masuda A, Kondo M, Saito T, Yatabe Y, Kobayashi T, et al. (1997) Establishment of human peripheral lung epithelial cell lines (HPL1) retaining differentiated characteristics and responsiveness to epidermal growth factor, hepatocyte growth factor, and transforming growth factor beta1. Cancer Res 57: 4898-4904.
-
(1997)
Cancer Res
, vol.57
, pp. 4898-4904
-
-
Masuda, A.1
Kondo, M.2
Saito, T.3
Yatabe, Y.4
Kobayashi, T.5
-
47
-
-
51249109941
-
PSMB and RPL32 are suitable denominators to normalize gene expression profiles in bronchoalveolar cells
-
Kriegova E, Arakelyan A, Fillerova R, Zatloukal J, Mrazek F, et al. (2008) PSMB and RPL32 are suitable denominators to normalize gene expression profiles in bronchoalveolar cells. BMC Mol Biol 9: 69.
-
(2008)
BMC Mol Biol
, vol.9
, pp. 69
-
-
Kriegova, E.1
Arakelyan, A.2
Fillerova, R.3
Zatloukal, J.4
Mrazek, F.5
-
48
-
-
0028547954
-
A massively parallel genetic algorithm for RNA secondary structure prediction
-
Shapiro BA, Navetta J (1994) A massively parallel genetic algorithm for RNA secondary structure prediction. J Supercomputing 8: 195-207.
-
(1994)
J Supercomputing
, vol.8
, pp. 195-207
-
-
Shapiro, B.A.1
Navetta, J.2
-
49
-
-
0029966818
-
An annealing mutation operator in the genetic algorithms for RNA folding
-
Shapiro BA, Wu JC (1996) An annealing mutation operator in the genetic algorithms for RNA folding. Comput Appl Biosci 12: 171-180.
-
(1996)
Comput Appl Biosci
, vol.12
, pp. 171-180
-
-
Shapiro, B.A.1
Wu, J.C.2
-
50
-
-
0035823067
-
RNA folding pathway functional intermediates: Their prediction and analysis
-
Shapiro BA, Bengali D, Kasprzak W, Wu JC (2001) RNA folding pathway functional intermediates: their prediction and analysis. J Mol Biol 312: 27-44.
-
(2001)
J Mol Biol
, vol.312
, pp. 27-44
-
-
Shapiro, B.A.1
Bengali, D.2
Kasprzak, W.3
Wu, J.C.4
-
51
-
-
0035105948
-
The massively parallel genetic algorithm for RNA folding: MIMD implementation and population variation
-
Shapiro BA, Wu JC, Bengali D, Potts MJ (2001) The massively parallel genetic algorithm for RNA folding: MIMD implementation and population variation. Bioinformatics 17: 137-148.
-
(2001)
Bioinformatics
, vol.17
, pp. 137-148
-
-
Shapiro, B.A.1
Wu, J.C.2
Bengali, D.3
Potts, M.J.4
-
52
-
-
31144459945
-
Structural polymorphism of the HIV-1 leader region explored by computational methods
-
Kasprzak W, Bindewald E, Shapiro BA (2005) Structural polymorphism of the HIV-1 leader region explored by computational methods. Nucleic Acids Res 33: 7151-7163.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 7151-7163
-
-
Kasprzak, W.1
Bindewald, E.2
Shapiro, B.A.3
-
53
-
-
30744474178
-
Structural differentiation of the HIV-1 polyA signals
-
Gee AH, Kasprzak W, Shapiro BA (2006) Structural differentiation of the HIV-1 polyA signals. J Biomol Struct Dyn 23: 417-428.
-
(2006)
J Biomol Struct Dyn
, vol.23
, pp. 417-428
-
-
Gee, A.H.1
Kasprzak, W.2
Shapiro, B.A.3
-
54
-
-
33746541594
-
The role of a metastable RNA secondary structure in hepatitis delta virus genotype III RNA editing
-
Linnstaedt SD, Kasprzak WK, Shapiro BA, Casey JL (2006) The role of a metastable RNA secondary structure in hepatitis delta virus genotype III RNA editing. RNA 121: 521-1533.
-
(2006)
RNA
, vol.121
, pp. 521-1533
-
-
Linnstaedt, S.D.1
Kasprzak, W.K.2
Shapiro, B.A.3
Casey, J.L.4
-
55
-
-
66449091242
-
The fraction of RNA that folds into the correct branched secondary structure determines hepatitis delta virus type 3 RNA editing levels
-
Linnstaedt SD, Kasprzak WK, Shapiro BA, Casey JL (2009) The fraction of RNA that folds into the correct branched secondary structure determines hepatitis delta virus type 3 RNA editing levels. RNA 15: 1177-1187.
-
(2009)
RNA
, vol.15
, pp. 1177-1187
-
-
Linnstaedt, S.D.1
Kasprzak, W.K.2
Shapiro, B.A.3
Casey, J.L.4
-
56
-
-
0030207112
-
STRUCTURELAB: A heterogeneous bioinformatics system for RNA structure analysis
-
Shapiro BA, Kasprzak W (1996) STRUCTURELAB: a heterogeneous bioinformatics system for RNA structure analysis. J Mol Graph 14: 194-205, 222-224.
-
(1996)
J Mol Graph
, vol.14
, Issue.194-205
, pp. 222-224
-
-
Shapiro, B.A.1
Kasprzak, W.2
-
57
-
-
0033022017
-
Stem Trace: An interactive visual tool for comparative RNA structure analysis
-
Kasprzak W, Shapiro B (1999) Stem Trace: an interactive visual tool for comparative RNA structure analysis. Bioinformatics 15: 16-31.
-
(1999)
Bioinformatics
, vol.15
, pp. 16-31
-
-
Kasprzak, W.1
Shapiro, B.2
-
58
-
-
33750505657
-
Graphical exploratory data analysis of RNA secondary structure dynamics predicted by the massively parallel genetic algorithm
-
Shapiro BA, Kasprzak W, Grunewald C, Aman J (2006) Graphical exploratory data analysis of RNA secondary structure dynamics predicted by the massively parallel genetic algorithm. J Mol Graph Model 25: 514-531.
-
(2006)
J Mol Graph Model
, vol.25
, pp. 514-531
-
-
Shapiro, B.A.1
Kasprzak, W.2
Grunewald, C.3
Aman, J.4
-
59
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker M (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31: 3406-3415.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
-
60
-
-
0033591465
-
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
-
Mathews DH, Sabina J, Zuker M, Turner DH (1999) Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J Mol Biol 288: 911-940.
-
(1999)
J Mol Biol
, vol.288
, pp. 911-940
-
-
Mathews, D.H.1
Sabina, J.2
Zuker, M.3
Turner, D.H.4
|