The influence of flow cell geometry related shear stresses on the distribution, structure and susceptibility of Pseudomonas aeruginosa 01 biofilms

Biofouling

Volumn 25, Issue 8, 2009, Pages 711-725

  Mehdi Salek, M ^a   Jones, Steven M ^a   Martinuzzi, Robert J ^a  

^a UNIVERSITY OF CALGARY   (Canada)

Author keywords

Biofilms; Flow cell; Pseudomonas aeruginosa; Shear stress

Indexed keywords

ANTIINFECTIVE AGENT; GENTAMICIN;

ANTIBIOTICS; BACTERIUM; BIOFILM; COLONIZATION; COMPUTATIONAL FLUID DYNAMICS; HYDRODYNAMICS; MICROSCOPY; SHEAR STRESS;

ARTICLE; BACTERIUM ADHERENCE; BIOFILM; CONFOCAL MICROSCOPY; CYTOLOGY; DRUG EFFECT; FLOW CYTOMETRY; GROWTH, DEVELOPMENT AND AGING; INSTRUMENTATION; MECHANICAL STRESS; MICROBIAL VIABILITY; MICROBIOLOGICAL EXAMINATION; PSEUDOMONAS AERUGINOSA; THREE DIMENSIONAL IMAGING;

ANTI-BACTERIAL AGENTS; BACTERIAL ADHESION; BIOFILMS; FLOW CYTOMETRY; GENTAMICINS; IMAGING, THREE-DIMENSIONAL; MICROBIAL SENSITIVITY TESTS; MICROBIAL VIABILITY; MICROSCOPY, CONFOCAL; PSEUDOMONAS AERUGINOSA; STRESS, MECHANICAL;

BACTERIA (MICROORGANISMS); BASIDIOMYCOTA; PSEUDOMONAS AERUGINOSA;

EID: 70449336960     PISSN: 08927014     EISSN: 10292454     Source Type: Journal    
DOI: 10.1080/08927010903114603     Document Type: Article

References (70)

1. Averbuch D, Makhoul R, Rotshild V, Weintraub M, Engelhard D. 2008. Empiric treatment with once-daily cefonicid and gentamicin for febrile non-neutropenic pediatric cancer patients with indwelling central venous catheters. J Pediatr Hematol Oncol 30:527-532.
2. Azevedo NF, Pinto AR, Reis N, Keevil CW, Vieira MJ. 2006. Shear stress, temperature and inoculation concentration influence on the adhesion of water-stressed Helicobacter pylori to stainless steel 304. Appl Environ Microbiol 72:2936-2941.
3. Baillif S, Casoli E, Marion K, Roques C, Pellon G, Hartmann DJ, Freney J, Burillon C, Kodjikian L. 2006. A novel in vitro model to study staphylococcal biofilm formation on intraocular lenses under hydro-dynamic conditions. Invest Ophthalmol Vis Sci 47:3410-3416.
4. Banin E, Brady KM, Greenberg EP. 2006. Chelator-induced dispersal and killing of Pseudomonas aeruginosa cells in a biofilm. Appl Environ Microbiol 72:2064-2069.
5. Bloemberg GV, O'Toole GA, Lugtenberg BJ, Kolter R. 1997. Green fluorescent protein as a marker for Pseudomonas spp. Appl Environ Microbiol 63:4543-4551.
6. Bott TR. 1995. Fouling of heat exchangers. Amsterdam: Elsevier. p. 524.
7. Bruhn JB, Haagensen JA, Bagge-Ravn D, Gram L. 2006. Culture conditions of Roseobacter strain 27-4 affect its attachment and biofilm formation as quantified by real-time PCR. Appl Environ Microbiol 72:3011-3015.
8. Bryers JD. 2008. Medical biofilms. Biotechnol Bioeng 100:1-18.
9. Cao YS, Alaerts GJ. 1995. Influence of reactor type and shear stress on aerobic biofilm morphology, population and kinetics. Water Res 29:107-118.
10. Ceri H, Olson ME, Stremick C, Read RR, Morck DW, Buret AG. 1999. The Calgary biofilm device: a new technology for rapid determination of antibiotic susceptabilities of bacterial biofilms. J Clin Microbiol 37:1771-1776.
11. Characklis WG. 1980. Fouling biofilm development: a process analysis. Biotechnol Bioeng 23:1923-1960.
12. Characklis WG, Wilderer PA. 1989. Structure and function of biofilms. New York: Wiley. p. 6-9.
13. Characklis WG, Turakhia MH, Zelver N. 1990. Transport and interfacial transport phenomena. In: Characklis WG, Marshal KC, editors. Biofilms. New York: John Wiley and Sons. p. 265-340.
14. Cogan NG, Keener JP. 2004. The role of the biofilm matrix in structural development. Math Med Biol 21:147-166.
15. de Beer D, Stoodley P, Roe F, Lewandowski Z. 1994. Effects of biofilm structures on oxygen distribution and mass transport. Biotechnol Bioeng 43:1131-1138.
16. Dillon R, Fauci L. 2000. A microscale model of bacterial and biofilm dynamics in porous media. Biotechnol Bioeng 68:536-547.
17. Dunsmore BC, Jacobsen A, Hall-Stoodley L, Bass CJ, Lappin-Scott HM, Stoodley P. 2002. The influence of fluid shear on the structural and material properties of sulphate-reducing bacterial biofilms. J Ind Microbiol Biotechnol 29:347-353.
18. Eberl HJ, Efendiev MA. 2003. Modeling, analysis, and simulation of biofilm formation and decay. PAMM 2:430-431.
19. Ebrahimi S, Picioreanu C, Xavier JB, Kleerebezem R, Kreutzer M, Kapteijn F, Moulijn JA, van Loosdrecht MCM. 2005. Biofilm growth pattern on honeycomb monolith packings: effect of shear rate and substrate transport limitations. Catal Today 105:448-454.
20. Geesey GG, Bryers JD. 2000. Biofouling of engineered materials and systems. In: Bryers JD, editor. Biofilms II: process analysis and applications. New York: Wiley-Liss, Inc. p. 237-279.
21. Gjersing EL, Codd SL, Seymour JD, Stewart PS. 2005. Magnetic resonance microscopy analysis of advective transport in a biofilm reactor. Biotechnol Bioeng 89:822-834.
22. Harrison JJ, Ceri H, Turner RJ. 2007. Multimetal resistance and tolerance in microbial biofilms. Nat Rev Microbiol 5:928-938.
23. Holman JP. 1997. Heat transfer. 8th ed. New York: McGraw-Hill. p. 205-263.
24. Horn H, Reiff H, Morgenroth E. 2003. Simulation of growth and detachment in biofilm systems under defined hydrodynamic conditions. Biotechnol Bioeng 8:607-617.
25. Hornemann JA, Lysova AA, Codd SL, Seymour JD, Busse SC, Stewart PS, Brown JR. 2008. Biopolymer and water dynamics in microbial biofilm extracellular polymeric substance. Biomacromolecules 9:2322-2328.
26. Jones SM, Yerly J, Hu Y, Ceri H, Martinuzzi R. 2007. Structure of Proteus mirabilis biofilms grown in artificial urine and standard laboratory media. FEMS Microbiol Lett 268:16-21.
27. Jordening HJ, Winter J. 2005. Environmental biotechnology: concepts and applications. Weinheim: Wiley-VCH. p. 411-414.
28. Kirisits MJ, Margolis JJ, Purevdorg-Gage BL, Baughan B, Chopp DL, Stoodley P, Parsek MR. 2007. The influence of the hydrodynamic environment on quorum sensing in Pseudomonas aeruginosa biofilms. J. Bacteriol 189:8357-8360.
29. Klapper I, Rupp CJ, Cargo R, Purvedorj B, Stoodley P. 2002. Viscoelastic fluid description of bacterial biofilm material properties. Biotechnol Bioeng 80:289-296.
30. Klausen M, Gjermansen M, Kreft JU, Tolker-Nielsen T. 2006. Dynamics of development and dispersal in sessile microbial communities: examples from Pseudomonas aeruginosa and Pseudomonas putida model biofilms. FEMS Microbiol Lett 261:1-11.
31. Lappin-Scott HM, Brading MG, Jass J. 1994. How do bacteria reach surfaces? In: Wimpenny J, Nichols W, Stickler D, Lappin-Scott H, editors. Bacterial biofilms and their control in medicine and industry. Cardiff (UK): Bioline. p. 19-23.
32. Lee J-H, Kaplan JB, Lee WY. 2008. Microfluidic devices for studying growth and detachment of Staphylococcus epidermidis biofilms. Biomed Microdevices 10:489-498.
33. Leutheusser HJ. 1984. Velocity distribution and skin friction resistance in rectangular ducts. J Wind Eng Ind Aerodyn 16:315-327.
34. Lewandowski Z, Stoodley P, Altobelli S. 1995. Experimental and conceptual studies on mass transport in biofilms. Water Sci Technol 31:153-162.
35. MacLeod SM, Stickler DJ. 2007. Species interactions in mixed-community crystalline biofilms on urinary catheters. Med Microbiol 56:1549-1557.
36. Manz B, Volke F, Goll D, Horn H. 2003. Measuring local flow velocities and biofilm structure in biofilm systems with magnetic resonance imaging (MRI). Biotechnol Bioeng 84:424-432.
37. Marshall KC. 1980. Bacterial adhesion in natural environments. In: Berkeley RCW Lynch JM, Melling J, Rutter PR, Vincent B, editors. Microbial adhesion to surfaces. Chichester, UK: Ellis Horwood Publishers. p. 187-196.
38. Miksis MJ, Davis SH. 1994. J Fluid Mech 273:125-139.
39. Nejadnik MR, van der Mei HC, Busscher HJ, Norde W. 2008. Determination of the shear force at the balance between bacterial attachment and detachment in weak-adherence systems, using a flow displacement chamber. Appl Environ Microbiol 74:916-919.
40. Ochoa J-C, Coufort C, Escudie R, Line A, Paul E. 2007. Influence of non-uniform distribution of shear stress on aerobic biofilms. Chem Eng Sci 62:3672-3684.
41. Percival SL, Bowler PG. 2004. Biofilms and their potential role in wound healing. Wounds 16:234-240.
42. Pereira MO, Kuehn M, Wuertz S, Neu T, Melo, LF. 2002. Effect of flow regime on the architecture of a Pseudomo-nas fluorescens biofilm. Biotechnol Bioeng 78:164-171.
43. Picioreanu C, Van Loosdrecht M, Heijnen JJ. 2000a. Effect of diffusive and convective substrate transport on biofilm structure formation: a two-dimensional modeling study. Biotechnol Bioeng 69:504-515.
44. Picioreanu C, Van Loosdrecht MHJ, Heijnen JJ. 2000b. A theoretical study on the effect of surface roughness on mass transport and transformation in biofilms. Biotechnol Bioeng 68:355-369.
45. Purevdorj B, Costerton JW, Stoodley P. 2002. Influence of hydrodynamics and cell signaling on the structure and behavior of Pseudomonas aeruginosa biofilms. Appl Environ Microbiol 68:4457-4464.
46. Purevdorj-Gage B, Costerton WJ, Stoodley P. 2005. Phenotypic differentiation and seeding dispersal in non-mucoid and mucoid Pseudomonas aeruginosa biofilms. Microbiology 145:1569-1576.
47. Rahardjo YS, Tramper J, Rinzema A. 2006. Modeling conversion and transport phenomena in solid-state fermentation: a review and perspectives. Biotechnol Adv 24:161-179.
48. Reichert P, Wanner O. 1997. Movement of solids in biofilms: significance of liquid phase transport. Water Sci Tecnol 36:321-328.
49. Rickard AH, McBain AJ, Stead AT, Gilbert P. 2004. Shear rate moderates community diversity in fresh water biofilms. Appl Environ Microbiol 70:7426-7435.
50. Rittmann BE. 1982. The effect of shear stress on biofilm loss rate. Biotechnol Bioeng 24:501-506.
51. Salek M, Martinuzzi RJ. 2007. Numerical simulation of fluid flow and oxygen transport in the tube flow cells containing biofilms. Proceedings of 5th Joint ASME/ JSME Fluid Engineering Conference, San Diego, USA. p. 1-8.
52. Sezonov G, Joseleau-Petit D, D'Ari R. 2007. Escherichia coli physiology in Luria-Bertani broth. J Bacteriol 189:8746-8749.
53. Sherman FS. 1990. Viscous flow. New York: McGraw-Hill Publishing Co. p. 363-367.
54. Simões M, Pereira MO, Vieira MJ. 2003. Effect of different concentrations of ortho-phthalaldehyde on biofilms formed by Pseudomonas fluorescens under different flow conditions. Biofouling 19:287-295.
55. Soini SM, Koskinen KT, Vilenius MJ, Puhakka JA. 2002. Effects of fluid-flow velocity and water quality on planktonic and sessile microbial growth in water hydraulic system. Water Res 36:3812-3820.
56. Spiga M, Morini GL. 1994. A symmetric solution for velocity profile in laminar flow through rectangular ducts. Int Comm Heat Mass Transfer 21:469-475.
57. Stoodley P, Hall-Stoodley L, Lappin-Scott HM. 2001a. Detachment, surface migration and other dynamic behavior in bacterial biofilms revealed by digital time-lapse imaging. Methods Enzymol 337:306-319.
58. Stoodley P, Boyle JD, Dodds I, Lapping-Scott HM. 1997a. Consensus model of biofilm structure. In: Wimpenny JWT, Handley PS, Gilbert P, Lappin-Scott HM, Jones M, editors. Biofilms: community interactions and control. Cardiff, UK: BioLine. p. 1-9.
59. Stoodley P, Yang S, Lappin-Scott H, Lewandowski Z. 1997b. Relationship between mass transfer coefficient and liquid flow velocity in heterogeneous biofilms using microelectrodes and confocal microscopy. Biotechnol Bioeng 56:681-688.
60. Stoodley P, Dodds I, Boyle JD, Lappin-Scott HM. 1999a. Influence of hydrodynamics and nutrients on biofilm structure. J Appl Microbiol 85:19-28.
61. Stoodley, P, Jorgensen F, Williams P, Lappin-Scott HM. 1999b. The role of hydrodynamics and AHL signalling molecules as determinants of the structure of Pseudomonas aeruginosa biofilms. In: Bayston R, Brading M, Gilbert P, Walker J, Wimpenny JWT, editors. Biofilms: the good, the bad, and the ugly. Cardiff (UK): BioLine. p. 323-330.
62. Stoodley P, Cargo R, Rupp CJ, Wilson S, Klapper I. 2002. Biofilm material properties as related to shear-induced deformation and detachment phenomena. J Ind Microbiol Biotechnol 29:361-367.
63. Stoodley P, Jacobsen A, Dunsmore BC, Purevdorj B, Wilson S, Lappin-Scott HM, Costerton JW. 2001b. The influence of fluid shear and AlCl3 on the material properties of Pseudomonas aeruginosa PAO1 and Desulfovibrio sp. EX265 Biofilms. Water Sci Technol 43:113-120.
64. Swope KL, Flickinger MC. 1996. The use of confocal scanning laser microscopy and other tools to characterize Escherichia coli in a high-cell-density synthetic biofilm. Biotechnol Bioeng 20; 52:340-356.
65. Towler BW, Rupp CJ, Cunningham AB, Stoodley P. 2003. Viscoelastic properties of a mixed culture biofilm from rheometer creep analysis. Biofouling 19:279-285.
66. Vieira MJ, Melo LF, Pinheiro MM. 1993. Biofilm formation: hydrodynamic effects on internal diffusion and structure. Biofouling 7:67-80.
67. Wijeyekoon S, Mino T, Satoh H, Matsuo T. 2000. Growth and novel structural features of tubular biofilms produced under hydrodynamic conditions. Water Sci Technol 41:129-138.
68. Wood BD, Whitaker S. 1999. Cellular growth in biofilms. Biotechnol Bioeng 64:656-670.
69. Yerly J, Hu Y, Jones SM, Martinuzzi RJ. 2007. A two step procedure for automatic and accurate segmentation of volumetric CLSM biofilm images. J Microbiol Methods 70:424-433.
70. Zeng Y, Lee TS, Yu P, Roy P, Low HT. 2006. Mass transport and shear stress in a microchannel bioreactor: numerical simulation and dynamic similarity. ASME J Biomech Eng 128:185-193.