Characterization of starch synthase I and II expressed in early developing seeds of kidney bean (Phaseolus vulgaris L.)

Bioscience, Biotechnology and Biochemistry

Volumn 68, Issue 9, 2004, Pages 1949-1960

  Senoura, Takeshi ^a   Isono, Naoto ^a,b   Yoshikawa, Motoyo ^a   Asao, Ayako ^a   Hamada, Shigeki ^a   Watanabe, Kenji ^a   Ito, Hiroyuki ^a   Matsui, Hirokazu ^a  

^a HOKKAIDO UNIVERSITY   (Japan)

^b MIE UNIVERSITY   (Japan)

Author keywords

Amylopectin; Kidney bean (Phaseolus vulgaris L.); Kinetics; Starch synthase

Indexed keywords

BIOSYNTHESIS; CELLS; DNA; ENZYMES; ESCHERICHIA COLI; GELS; RNA;

BLOT ANALYSIS; ISOZYMES; RECOMBINANT ENZYMES; STARCH SYNTHASE (SS);

STARCH;

PLANT RNA; STARCH; STARCH SYNTHASE; STARCH SYNTHASE II; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; BEAN; BIOSYNTHESIS; ENZYMOLOGY; GENE EXPRESSION REGULATION; GENETICS; MOLECULAR CLONING; MOLECULAR GENETICS; PHYLOGENY; PLANT SEED; SEQUENCE ALIGNMENT;

AMINO ACID SEQUENCE; CLONING, MOLECULAR; GENE EXPRESSION REGULATION; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, ENZYMOLOGIC; GENE EXPRESSION REGULATION, PLANT; MOLECULAR SEQUENCE DATA; PHASEOLUS; PHYLOGENY; PLANT PROTEINS; RNA, PLANT; SEEDS; SEQUENCE ALIGNMENT; STARCH; STARCH SYNTHASE;

ESCHERICHIA COLI; PHASEOLUS (ANGIOSPERM); PHASEOLUS VULGARIS;

EID: 7044231505     PISSN: 09168451     EISSN: None     Source Type: Journal    
DOI: 10.1271/bbb.68.1949     Document Type: Article

References (47)

1. Slattery, C. J., Kavakli, I. H., and Okita, T. W., Engineering starch for increased quantity and quality. Trends Plant Sci., 5, 291-298 (2000).
2. Myers, A. M., Morell, M. K., James, M. J., and Ball, S. G., Recent progress toward understanding biosynthesis of the amylopectin crystal. Plant Physiol., 122, 989-997 (2000).
3. Smith, A. M., The biosynthesis of starch granules. Biomacromolecules, 2, 335-341 (2001).
4. Nakamura, Y., Towards a better understanding of the metabolic system for amylopectin biosynthesis in plants: rice endosperm as a model tissue. Plant Cell Physiol., 43, 718-725 (2002).
5. Ball, S. G., and Morell, M. K., From bacterial glycogen to starch: understanding the biogenesis of the plant starch granule. Annu. Rev. Plant Biol., 54, 207-233 (2003).
6. Smith, A. M., Making starch. Curr. Opin. Plant Biol., 2, 223-229 (1999).
7. Smith, A. M., Denyer, K., and Martin, C., The synthesis of the starch granule. Annu. Rev. Plant Physiol. Plant Mol. Biol., 48, 67-87 (1997).
8. Kossmann, J., and Lloyd, J., Understanding and influencing starch biochemistry. Crit. Rev. Plant Sci., 19, 171-226 (2000).
9. Denyer, K., Johnson, P., Zeeman, S., and Smith, A. M., The control of amylose synthesis. J. Plant Physiol., 158, 479-487 (2001).
10. Craig, J., Lloyd, J. R., Tomlinson, K., Barber, L., Edwards, E., Wang, T. L., Martin, C., Hedley, C. L., and Smith, A. M., Mutations in the gene encoding starch synthase II profoundly alter amylopectin structure in pea embryos. Plant Cell, 10, 413-426 (1998).
11. Morell, M. K., Kosar-Hashemi, B., Cmiel, M., Samuel, M. S., Chandler, P., Rahman, S., Buleon, A., Batey, I. L., and Li, Z., Barley sex6 mutants lack starch synthase IIa activity and contain a starch with novel properties. Plant J., 34, 173-185 (2003).
12. Edwards, A., Fulton, D. C., Hylton, C. M., Jobling, S. A., Gidley, M., Rössner, U., Martin, C., and Smith, A. M., A combined reduction in activity of starch synthase II and III of potato has novel effects on the starch of tubers. Plant J., 17, 251-261 (1999).
13. Lloyd, J. R., Landschütze, V., and Kossmann, J., Simultaneous antisense inhibition of two starch-synthase isoforms in potato tubers leads to accumulation of grossly modified amylopectin. Biochem. J., 338, 515-521 (1999).
14. Imparl-Radosevich, J. M., Li, P., Zhang, L., McKean, A. L., Keeling, P. L., and Guan, H. P., Purification and characterization of maize starch synthase I and its truncated forms. Arch. Biochem, Biophys., 353, 64-72 (1998).
15. Knight, M. F., Harn, C., Lilley, C. E. R., Guan, H., Singletary, G. W., Mu-Forster, C., Wasserman, B. P., and Keeling, P. L., Molecular cloning of starch synthase I from maize (W64) endosperm and expression in Escherichia coli. Plant J., 14, 613-622 (1998).
16. Edwards, A., Borthakur, A., Bornemann, S., Venail, J., Denyer, K., Waite, D., Fulton, D., Smith, A., and Martin, C., Specificity of starch synthase isoforms from potato. Eur. J. Biochem., 266, 724-736 (1999).
17. Imparl-Radosevich, J. M., Nichols, D. J., Li, P., McKean, A. L., Keeling, P. L., and Guan, H. P., Analysis of purified maize starch synthases IIa and IIb: SS isoforms can be distinguished based on their kinetic properties. Arch. Biochem. Biophys., 362, 131-138 (1999).
18. Commuri, P. D., and Keeling, P. L., Chain-length specificities of maize starch synthase I enzyme: studies of glucan affinity and catalytic properties. Plant J., 25, 475-486 (2001).
19. Isono, N., Senoura, T., Yoshikawa, M., Sakurai, Y., Watanabe, K., Ito, H., and Matsui, H., Occurrence of multiple forms for starch synthase II isozyme in developing seeds of kidney bean. J. Appl. Glycosci., 51, 101-107 (2004).
20. Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A., and Struhl, K., "Short Protocols in Molecular Biology" 3rd ed., John Wiley and Sons Inc., New York (1992).
21. Hamada, S., Nozaki, K., Ito, H., Yoshimoto, Y., Yoshida, H., Hiraga, S., Onodera, S., Honma, M., Takeda, Y., and Matsui, H., Two starch-branching-enzyme isoforms occur in different fractions of developing seeds of kidney bean. Biochem. J., 359, 23-34 (2001).
22. Bradford, M. M., A Rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem., 72, 248-254 (1976).
23. Isono, N., Ito, H., Senoura, T., Yoshikawa, M., Nozaki, K., and Matsui, H., Molecular cloning of a cDNA encoding granule-bound starch synthase I from kidney bean seeds and expression in Escherichia coli. J. Appl. Glycosci., 50, 355-360 (2003).
24. Smith, A. M., Evidence that the 'waxy' protein of pea (Pisum sativum L.) is not the major starch-granule-bound starch synthase. Planta, 182, 599-604 (1990).
25. Tomlinson, K. L., Lloyd, J. R., and Smith, A. M., Importance of isoforms of starch-branching enzyme in determining the structure of starch in pea leaves. Plant J., 11, 31-43 (1997).
26. Dubois, M., Gilles, K. A., Hamilton, J. K., Rebers, P. A., and Smith, F., Colorimetric method for determination of sugars and related substances. Anal. Chem., 28, 350-356 (1956).
27. Hizukuri, S., Takeda, Y., and Yasuda, M., Multi-branched nature of amylose and the action of debranching enzymes. Carbohydr. Res., 94, 205-213 (1981).
28. Emanuelsson, O., Nielsen, H., Brunak, S., and von Heijne, G., Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. J. Mol. Biol., 300, 1005-1016 (2000).
29. Emanuelsson, O., Nielsen, H., and von Heijne, G., ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites. Protein Sci., 8, 978-984 (1999).
30. Dry, I., Smith, A., Edwards, A., Bhattacharyya, M., Dunn, P., and Martin, C., Characterization of cDNAs encoding two isoforms of granule-bound starch synthase which show differential expression in developing storage organs of pea and potato. Plant J., 2, 193-202 (1992).
31. Furukawa, K., Tagaya, M., Inouye, M., Preiss, J., and Fukui, T., Identification of lysine 15 at the active site in Escherichia coli glycogen synthase. J. Biol. Chem., 265, 2086-2090 (1990).
32. Furukawa, K., Tagaya, M., Tanizawa, K., and Fukui, T., Role of the conserved Lys-X-Gly-Gly sequence at the ADP-glucose-binding site in Escherichia coli glycogen synthase. J. Biol. Chem., 268, 23837-23842 (1993).
33. Imparl-Radosevich, J. M., Keeling, P. L., and Guan, H. P., Essential arginine residues in maize starch synthase IIa are involved in both ADP-glucose and primer binding. FEBS Lett., 457, 357-362 (1999).
34. Nichols, D. J., Keeling, P. L., Spalding, M., and Guan, H., Involvement of conserved aspartate and glutamate residues in the catalysis and substrate binding of maize starch synthase. Biochemistry, 39, 7820-7825 (2000).
35. Yep, A., Ballicora, M. A., Sivak, M. N., and Preiss, J., Identification and characterization of a critical region in the glycogen synthase from Escherichia coli. J. Biol. Chem., 279, 8359-8367 (2004).
36. Ben-Bassat, A., Bauer, K., Chang, S. Y., Myambo, K., Boosman, A., and Chang, S., Processing of the initiation methionine from proteins: Properties of the Escherichia coli methionine aminopeptidase and its gene structure. J. Bacteriol., 169, 751-757 (1987).
37. Burton, R. A., Bewley, J. D., Smith, A. M., Bhattacharyya, M. K., Tatge, H., Ring, S., Bull, V., Hamilton, W. D. O., and Martin, C., Starch branching enzymes belonging to distinct enzyme families are deferentially expressed during pea embryo development. Plant J., 7, 3-15 (1995).
38. Seo, B.-S., Kim, S., Scott, M. P., Singletary, G. W., Wong, K.-S., James, M. G., and Myers, A. M., Functional interactions between heterologously expressed starch-branching enzymes of maize and the glycogen synthases of brewer's yeast. Plant Physiol., 128, 1189-1199 (2002).
39. Tetlow, I. J., Wait, R., Lu, Z., Akkasaeng, R., Bowsher, C. G., Esposito, S., Kosar-Hashemi, B., Morell, M. K., and Emes, M. J., Protein phosphorylation in amyloplasts regulates starch branching enzyme activity and protein-protein interactions. Plant Cell, 16, 694-708 (2004).
40. Baba, T., Nishihara, M., Mizuno, K., Kawasaki, T., Shimada, H., Kobayashi, E., Ohnishi, S., Tanaka, K., and Arai, Y., Identification, cDNA cloning, and gene expression of soluble starch synthase in rice (Oryza sativa L.) immature seeds. Plant Physiol. 103, 565-573 (1993).
41. Li, Z., Rahman, S., Kosar-Hashemi, B., Mouille, G., Appels, R., and Morell, M. K., Cloning and characterization of a gene encoding wheat starch synthase I. Theor. Appl. Genet., 98, 1208-1216 (1999).
42. Kossmann, J., Abel, G. J. W., Springer, F., Lloyd, J. R., and Willmitzer, L., Cloning and functional analysis of a cDNA encoding a starch synthase from potato (Solanum tuberosum L.) that is predominantly expressed in leaf tissue. Planta, 208, 503-511 (1999).
43. Denyer, K., and Smith, A., The purification and characterization of the two forms of soluble starch synthase from developing pea embryos. Planta, 186, 609-617 (1992).
44. Denyer, K., Sidebottom, C., Hylton, C. M., and Smith, A. M., Soluble isoforms of starch synthase and starch-branching enzyme also occur within starch granules in developing pea embryos. Plant J., 4, 191-198 (1993).
45. Peat, S., Whelan, W. J., and Thomas, G. J., Evidence of multiple branching in waxy maize starch. J. Chem. Soc., 4546-4548 (1952).
46. Hizukuri, S., Polymodal distribution of the chain lengths of amylopectins, and its significance. Carbohydr. Res., 147, 342-347 (1986).
47. Matsui, H., Senoura, T., Isono, N., Sakurai, Y., Hamada, S., and Ito, H., Granule-bound starch synthase isozyme localized predominantly in kidney bean leaves. J. Appl. Glycosci., 50, 493-497 (2003).