Modelling epigenetic information maintenance: A kappa tutorial

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 5643 LNCS, Issue , 2009, Pages 17-32

  Krivine, Jean ^a   Danos, Vincent ^b   Benecke, Arndt ^a  

^a INSTITUT DES HAUTES ÉTUDES SCIENTIFIQUES   (France)

^b UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCHEMISTRY; CHEMICAL REACTIONS; COMPUTER AIDED ANALYSIS; MOLECULAR BIOLOGY; MOLECULAR STRUCTURE;

ACTIVE NETWORKS;

EID: 70350216058     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-02658-4_3     Document Type: Conference Paper

References (8)

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2. Faeder, J.R., Blinov, M.L., Hlavacek, W.S.: Rule-based modeling of biochemical systems with BioNetGen. In: Systems Biology, vol. 500, pp. 113-167. Humana Press (2009)
3. Danos, V., Feret, J., Fontana, W., Harmer, R., Krivine, J.: Rule-based modelling, symmetries, refinements. In: Fisher, J. (ed.) FMSB 2008. LNCS (LNBI), vol. 5054, pp. 103-122. Springer, Heidelberg (2008)
4. Esteller, M.: Cancer epigenomics: Dna methylomes and histone-modification maps. Nat. Rev. Genet. 8(4), 286-298 (2007)
5. Dinant, C., Luijsterburg, M.S., Höfer, T., von Bornstaedt, G., Vermeulen, W., Houtsmuller, A.B., van Driel, R.: Assembly of multiprotein complexes that control genome function. J. Cell Biol. 185(1), 21-26 (2009)
6. Kim, P.M., Lu, L.J., Xia, Y., Gerstein, M.B.: Relating three-dimensional structures to protein networks provides evolutionary insights. Science 314 (5807), 1938-1941 (2006)
7. Danos, V., Feret, J., Fontana, W., Krivine, J.: Scalable simulation of cellular signaling networks. In: Shao, Z. (ed.) APLAS 2007. LNCS, vol. 4807, pp. 139-157. Springer, Heidelberg (2007)
8. Danos, V., Feret, J., Fontana, W., Harmer, R., Krivine, J.: Investigation of a biological repair scheme. In: Corne, D.W., Frisco, P., Pǎun, G., Rozenberg, G., Salomaa, A. (eds.) WMC 2009. LNCS, vol. 5391, pp. 1-12. Springer, Heidelberg (2009)