In vitro incorporation of the phage Phi29 connector complex

Virology

Volumn 394, Issue 1, 2009, Pages 149-153

  Fu, Chi yu ^a   Prevelige Jr , Peter E ^a  

^a University of Alabama at Birmingham   (United States)

Author keywords

Connector protein; DNA packaging; dsDNA phage Phi29; In vitro capsid assembly; Portal vertex incorporation

Indexed keywords

CAPSID PROTEIN; DOUBLE STRANDED DNA;

ARTICLE; DNA PACKAGING; ESCHERICHIA COLI; GROWTH RATE; IN VITRO STUDY; NONHUMAN; PRIORITY JOURNAL; PROTEIN ASSEMBLY; PROTEIN EXPRESSION; VIRUS CAPSID;

BACILLUS PHAGES; CAPSID; CAPSID PROTEINS; MICROSCOPY, IMMUNOELECTRON; VIRION; VIROSOMES; VIRUS ASSEMBLY;

BACILLUS PHAGE PHI29; MIRIDAE;

EID: 70350128857     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2009.08.016     Document Type: Article

References (40)

1. Bazinet C., and King J. The DNA translocating vertex of dsDNA bacteriophage. Annu. Rev. Microbiol. 39 (1985) 109-129
2. Bazinet C., and King J. Initiation of P22 procapsid assembly in vivo. J. Mol. Biol. 202 1 (1988) 77-86
3. Bazinet C., Villafane R., and King J. Novel second-site suppression of a cold-sensitive defect in phage P22 procapsid assembly. J. Mol. Biol. 216 3 (1990) 701-716
4. Black L.W., and Silverman D.J. Model for DNA packaging into bacteriophage T4 heads. J. Virol. 28 2 (1978) 643-655
5. Camacho A., Jimenez F., De La Torre J., Carrascosa J.L., Mellado R.P., Vasquez C., Vinuela E., and Salas M. Assembly of Bacillus subtilis phage phi29. 1. Mutants in the cistrons coding for the structural proteins. Eur. J. Biochem. 73 1 (1977) 39-55
6. Casjens S., and King J. P22 morphogenesis. I: catalytic scaffolding protein in capsid assembly. J. Supramol. Struct. 2 2-4 (1974) 202-224
7. Caspar D.L. Movement and self-control in protein assemblies. Quasi-equivalence revisited. Biophys. J. 32 1 (1980) 103-138
8. Caspar D.L., and Klug A. Physical principles in the construction of regular viruses. Cold Spring Harb. Symp. Quant. Biol. 27 (1962) 1-24
9. Cerritelli M.E., and Studier F.W. Assembly of T7 capsids from independently expressed and purified head protein and scaffolding protein. J. Mol. Biol. 258 2 (1996) 286-298
10. Cuervo A., Vaney M.C., Antson A.A., Tavares P., and Oliveira L. Structural rearrangements between portal protein subunits are essential for viral DNA translocation. J. Biol. Chem. 282 26 (2007) 18907-18913
11. Droge A., and Tavares P. In vitro packaging of DNA of the Bacillus subtilis bacteriophage SPP1. J. Mol. Biol. 296 1 (2000) 103-115
12. Droge A., Santos M.A., Stiege A.C., Alonso J.C., Lurz R., Trautner T.A., and Tavares P. Shape and DNA packaging activity of bacteriophage SPP1 procapsid: protein components and interactions during assembly. J. Mol. Biol. 296 1 (2000) 117-132
13. Earnshaw W., and King J. Structure of phage P22 coat protein aggregates formed in the absence of the scaffolding protein. J. Mol. Biol. 126 4 (1978) 721-747
14. Fane B.A., and Prevelige Jr. P.E. Mechanism of scaffolding-assisted viral assembly. Adv. Protein. Chem. 64 (2003) 259-299
15. Fu C.Y., Morais M.C., Battisti A.J., Rossmann M.G., and Prevelige Jr. P.E. Molecular dissection of o29 scaffolding protein function in an in vitro assembly system. J. Mol. Biol. 366 4 (2007) 1161-1173
16. Greene B., and King J. Scaffolding mutants identifying domains required for P22 procapsid assembly and maturation. Virology 225 1 (1996) 82-96
17. Grimes S., Jardine P.J., and Anderson D. Bacteriophage phi 29 DNA packaging. Adv. Virus. Res. 58 (2002) 255-294
18. Guo P.X., Erickson S., and Anderson D. A small viral RNA is required for in vitro packaging of bacteriophage phi 29 DNA. Science 236 4802 (1987) 690-694
19. Guo P.X., Erickson S., Xu W., Olson N., Baker T.S., and Anderson D. Regulation of the phage phi 29 prohead shape and size by the portal vertex. Virology 183 1 (1991) 366-373
20. Hagen E.W., Reilly B.E., Tosi M.E., and Anderson D.L. Analysis of gene function of bacteriophage phi 29 of Bacillus subtilis: identification of cistrons essential for viral assembly. J. Virol. 19 2 (1976) 501-517
21. Hugel T., Michaelis J., Hetherington C.L., Jardine P.J., Grimes S., Walter J.M., Falk W., Anderson D.L., and Bustamante C. Experimental test of connector rotation during DNA packaging into bacteriophage varphi29 capsids. PLoS. Biol. 5 3 (2007) e59
22. Lander G.C., Tang L., Casjens S.R., Gilcrease E.B., Prevelige P., Poliakov A., Potter C.S., Carragher B., and Johnson J.E. The structure of an infectious P22 virion shows the signal for headful DNA packaging. Science 312 5781 (2006) 1791-1795
23. Lander G.C., Tang L., et al. "The structure of an infectious P22 virion shows the signal for headful DNA packaging". Science 312 (2006) 1791-1795
24. Lebedev A.A., Krause M.H., Isidro A.L., Vagin A.A., Orlova E.V., Turner J., Dodson E.J., Tavares P., and Antson A.A. Structural framework for DNA translocation via the viral portal protein. Embo J. 26 7 (2007) 1984-1994
25. Lee C.S., and Guo P. Sequential interactions of structural proteins in phage phi 29 procapsid assembly. J. Virol. 69 8 (1995) 5024-5032
26. Lhuillier S., Gallopin M., Gilquin B., Brasiles S., Lancelot N., Letellier G., Gilles M., Dethan G., Orlova E.V., Couprie J., Tavares P., and Zinn-Justin S. Structure of bacteriophage SPP1 head-to-tail connection reveals mechanism for viral DNA gating. Proc. Natl. Acad. Sci. U.S.A. 106 21 (2009) 8507-8512
27. Moore S.D., and Prevelige Jr. P.E. Bacteriophage p22 portal vertex formation in vivo. J. Mol. Biol. 315 5 (2002) 975-994
28. Morais M.C., Choi K.H., Koti J.S., Chipman P.R., Anderson D.L., and Rossmann M.G. Conservation of the capsid structure in tailed dsDNA bacteriophages: the pseudoatomic structure of phi29. Mol. Cell. 18 2 (2005) 149-159
29. Poh S.L., El Khadali F., Berrier C., Lurz R., Melki R., and Tavares P. Oligomerization of the SPP1 Scaffolding Protein. J. Mol. Biol. 378 3 (2008) 551-564
30. Poliakov A., van Duijn E., Lander G., Fu C.Y., Johnson J.E., Prevelige Jr. P.E., and Heck A.J. Macromolecular mass spectrometry and electron microscopy as complementary tools for investigation of the heterogeneity of bacteriophage portal assemblies. J. Struct. Biol. 157 2 (2007) 371-383
31. Simpson A.A., Tao Y., Leiman P.G., Badasso M.O., He Y., Jardine P.J., Olson N.H., Morais M.C., Grimes S., Anderson D.L., Baker T.S., and Rossmann M.G. Structure of the bacteriophage phi29 DNA packaging motor. Nature 408 6813 (2000) 745-750
32. Singer G.P., Newcomb W.W., Thomsen D.R., Homa F.L., and Brown J. Identification of a region in the herpes simplex virus scaffolding protein required for interaction with the portal. J. Virol. 79 1 (2005) 132-139
33. Smith D.E., Tans S.J., Smith S.B., Grimes S., Anderson D.L., and Bustamante C. The bacteriophage straight phi29 portal motor can package DNA against a large internal force. Nature 413 6857 (2001) 748-752
34. Sun S., Kondabagil K., Gentz P.M., Rossmann M.G., and Rao V.B. The structure of the ATPase that powers DNA packaging into bacteriophage T4 procapsids. Mol. Cell. 25 6 (2007) 943-949
35. Sun S., Kondabagil K., Draper B., Alam T.I., Bowman V.D., Zhang Z., Hegde S., Fokine A., Rossmann M.G., and Rao V.B. The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces. Cell 135 7 (2008) 1251-1262
36. Tao Y., Olson N.H., Xu W., Anderson D.L., Rossmann M.G., and Baker T.S. Assembly of a tailed bacterial virus and its genome release studied in three dimensions. Cell 95 3 (1998) 431-437
37. Traub F., and Maeder M. Formation of the prohead core of bacteriophage T4 in vivo. J. Virol. 49 3 (1984) 892-901
38. Tsuprun V., Anderson D., and Egelman E.H. The bacteriophage phi 29 head-tail connector shows 13-fold symmetry in both hexagonally packed arrays and as single particles. Biophys. J. 66 6 (1994) 2139-2150
39. Xiang Y., Morais M.C., Battisti A.J., Grimes S., Jardine P.J., Anderson D.L., and Rossmann M.G. Structural changes of bacteriophage phi29 upon DNA packaging and release. Embo J. 25 21 (2006) 5229-5239
40. Zhang F., Lemieux S., Wu X., St-Arnaud D., McMurray C.T., Major F., and Anderson D. Function of hexameric RNA in packaging of bacteriophage phi 29 DNA in vitro. Mol. Cell. 2 1 (1998) 141-147