Scaffolding mutants identifying domains required for P22 procapsid assembly and maturation

Virology

Volumn 225, Issue 1, 1996, Pages 82-96

  Greene, Barrie ^a   King, Jonathan ^a  

^a MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN;

ARTICLE; BACTERIOPHAGE; CONTROLLED STUDY; ELECTRON MICROSCOPY; MATURATION; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; VIRUS ASSEMBLY; VIRUS CAPSID; VIRUS MUTANT;

MIRIDAE; UNIDENTIFIED BACTERIOPHAGE;

EID: 0030296886     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1996.0577     Document Type: Article

References (63)

1. Bazinet, C., Benbasat, J., King, J., Carazo, J. M., and Carrascosa, J. L. (1988). Purification and organization of the gene 1 portal protein required for phage P22 DNA packaging. Biochemistry 27, 1849-1856.
2. Bazinet, C., and King, J. (1988). Initiation of P22 procapsid assembly in vivo. J. Mol. Biol. 202, 77-86.
3. Berger, B., Shor, P. W., Tucker-Kellogg, L., and King, J. (1994). Local rule-based theory of virus shell assembly. Proc. Natl. Acad. Sci. USA 91, 7732-7736.
4. Black, L. W. (1989). DNA packaging in dsDNA bacteriophages. Annu. Rev. Microbiol. 43, 267-292.
5. Botstein, D., Chan, R. K., and Waddell, C. H. (1972). Genetics of bacteriophage P22. II. Gene order and gene function. Virology 49, 268-282.
6. Botstein, D., Waddell, C. H., and King, J. (1973). Mechanism of head assembly and DNA encapsulation in Salmonella phage P22. I. Genes, proteins, structures and DNA maturation. J. Mol. Biol. 80, 669-695.
7. Bryant, J. L., Jr., and King, J. (1984). DNA injection proteins are targets of acridine-sensitized photoinactivation of bacteriophage P22. J. Mol. Biol. 180, 837-863.
8. Casjens, S., Eppler, K., Sampson, L., Parr, R., and Wyckhoff, E. (1991). Fine structure genetic and physical map of the gene 3 to 10 regions of the bacteriophage P22 chromosome. Genetics 127, 637-647.
9. Casjens, S., and Hendrix, R. (1988). Control mechanisms in dsDNA bacteriophage assembly. In "The Bacteriophages" (R Calendar, Ed.), Vol. 1, pp. 15-91. Plenum, New York.
10. Casjens, S., and King, J. (1974). P22 morphogenesis I: Catalytic scaffolding protein in capsid assembly. J. Supramol. Struct. 2, 202-224.
11. Cornish, V. W., Kaplan, M. I., Veenstra, D. L., Kollman, P. A., and Schultz, P. G. (1994). Stabilizing and destabilizing effects of placing β-branched amino acids in protein α-helices. Biochemistry 33, 12022-12031.
12. Desai, P., Watkins, S. C., and Person, S. (1994). The size and symmetry of B capsids of herpes simplex virus type 1 are determined by the gene products of the UL26 open reading frame. J. Virol. 68, 5365-5374.
13. D'Halluin, J-C. M., Martin, G. R., Torpier, G., and Boulanger, P. (1978). Adenovirus type 2 assembly analysed by reversible cross-linking of labile intermediates. J. Virol. 26, 357-363.
14. Earnshaw, W., and Casjens, S. (1980). DNA packaging by the double-stranded DNA bacteriophages. Cell 21, 319-331.
15. Earnshaw, W., and King, J. (1978). Structure of phage P22 coat protein aggregates formed in the absence of the scaffolding protein. J. Mol. Biol. 126, 721-747.
16. Edvardsson, B., Everitt, E., Jornvall, H., Prage, L., and Philipson, L. (1976). Intermediates in adenovirus assembly. J. Virol. 19, 533-547.
17. Eppler, K., Wyckhoff, E., Goates, J., Parr, R., and Casjens, S. (1991). Nucleotide sequence of the bacteriophage P22 genes required for DNA packaging. Virology 183, 519-538.
18. Fuller, M. T., and King, J. (1981). Purification of the coat and scaffolding proteins from procapsids of bacteriophage P22. Virology 112, 529-547.
19. Fuller, M. T., and King, J. (1982). Assembly in vitro of bacteriophage P22 procapsids from purified coat and scaffolding subunits. J. Mol. Biol. 156, 633-665.
20. Galisteo, M. L., and King, J. (1993). Conformational transformations in the protein lattice of phage P22 procapsids. Biophys. J. 65, 227-235.
21. Gordon, C. L., and King, J. (1993). Temperature-sensitive mutations in the phage P22 coat protein which interfere with polypeptide chain folding. J. Biol. Chem. 268, 9358-9368.
22. Gordon, C. L., and King, J. (1994). Genetic properties of temperature-sensitive folding mutants of the coat protein of phage P22. Genetics 136, 427-438.
23. Greene, B., and King, J. (1994). Binding of scaffolding subunits within the P22 procapsid lattice. Virology 205, 188-197.
24. Guo, P., Erickson, S, Xu, W., Olson, N., Baker, T. S., and Anderson, D. (1991). Regulation of the phage Φ29 prohead shape and size by the portal vertex. Virology 183, 366-373.
25. Haase-Pettingell, C., and King, J. (1988). Formation of aggregates from a thermolabile in vivo folding intermediate in P22 tailspike maturation. J. Biol. Chem. 263, 4977-4983.
26. Hartweig, E., Bazinet, C., and King, J. (1986). DNA injection apparatus of phage P22. Biophys. J. 49, 24-26.
27. Hendrix, R. W. (1985). Shape determination in virus assembly: The bacteriophage example. In "Virus Structure and Assembly" (S. Casjens, Ed.), pp. 169-203. Jones and Bartlett, Boston.
28. Hoffman, B., and Levine, M. (1975a). Bacteriophage P22 virion protein which performs an essential early function. I. Analysis of 16-ts mutants. J. Virol. 16, 1536-1546.
29. Hoffman, B., and Levine, M. (1975b). Bacteriophage P22 virion protein which performs an essential early function. II. Characterization of the gene 16 function. J. Virol. 16, 1547-1559.
30. Jarvik, J., and Botstein, D. (1973). A genetic method for determining the order of events in a biological pathway. Proc. Natl. Acad. Sci. USA 70, 2046-2050.
31. Jarvik, J., and Botstein, D. (1975). Conditional-lethal mutations that suppress genetic defects in morphogenesis by altering structural proteins. Proc. Natl. Acad. Sci. USA 72, 2738-2742.
32. Kellenberger, E. (1990). Form determination of the heads of bacteriophages. Eur. J. Biochem. 190, 233-248.
33. Keller, B., Dubochet, J., Adrian, M., Maeder, M., Wurtz, M., and Kellenberger, E. (1988). Length and shape variants of the bacteriophage T4 head: Mutations in the scaffolding core genes 68 and 22. J. Virol. 62, 2960-2969.
34. King, J., and Chiu, W. (1995). The procapsid to capsid transition in double-stranded DNA bacteriophages. In "Structural Biology of Viruses" (W. Chiu, R. Burnett, and R. Garcea, Eds.), Oxford Univ. Press, New York.
35. King, J., Griffin-Shea, R., and Fuller, M. T. (1980). Scaffolding proteins and the genetic control of virus shell assembly. Quart. Rev. Biol. 55, 369-393.
36. King, J., Lenk, E. V., and Botstein, D. (1973). Mechanism of head assembly and DNA encapsulation in Salmonella phage P22 II. Morphogenetic pathway. J. Mol. Biol. 80, 697-731.
37. Kochan, J., and Murialdo, H. (1983). Early intermediates in bacteriophage lambda prohead assembly. II. Identification of biologically active intermediates. Virology 131, 100-115.
38. Laemmli, U. K., Molbert, E., Showe, M., and Kellenberger, E. (1970). Form-determining function of the genes required for the assembly of the head of bacteriophage T4. J. Mol. Biol. 49, 99-113.
39. Lee, J. Y., Irmiere, A., and Gibson, W. (1988). Primate cytomegalovirus assembly: Evidence that DNA packaging occurs subsequent to B capsid assembly. Virology 167, 87-96.
40. Matusick-Kumar, L., Hurlburt, W., Weinheimer, S. P., Newcomb, W. W., Brown, J. C., and Gao, M. (1994). Phenotype of the herpes simplex virus type 1 protease substrate ICP35 mutant virus. J. Virol. 68, 5384-5394.
41. Matusick-Kumar, L., Newcomb, W. W., Brown, J. C., McCann, P. J., Hurlburt, W., Weinheimer, S. P., and Gao, M. (1995). The C-terminal 25 amino acids of the protease and its substrate ICP35 of herpes simplex virus type 1 are involved in the formation of sealed capsids. J. Virol. 69, 4347-4356.
42. Mesyanzhinov, V. V., Sobolev, B. N., Marusich, E. I., Prilipov, A. G., and Efimov, V. P. (1990). A proposed structure of bacteriophage T4 gene product 22 - a major prohead scaffolding core protein. J. Struct. Biol. 104, 24-31.
43. Murialdo, H. (1979). Early intermediates in bacteriophage lambda prohead assembly. Virology 96, 341-367.
44. Murialdo, H., and Becker, A. (1978a). Head morphogenesis of complex double-stranded deoxyribonucleic acid bacteriophages. Microbiol. Rev. 42, 529-576.
45. Murialdo, H., and Becker, A. (1978b). A genetic analysis of bacteriophage lambda prohead assembly in vitro. J. Mol. Biol. 125, 57-74.
46. Newcomb, W. W., and Brown, J. C. (1991). Structure of the herpes simplex virus capsid: Effects of extraction with guanidine hydrochloride and partial reconstitution of extracted capsids. J. Virol. 65, 613-620.
47. Ohya, Y., and Botstein, D. (1994). Diverse essential functions revealed by complementing yeast calmodulin mutants. Science 263, 963-966.
48. Poteete, A. R., Jarvik, V., and Botstein, D. (1979). Encapsulation of phage P22 DNA in vitro. Virology 95, 550-564.
49. Prasad, B. V. V., Prevelige, P. E., Marietta, E., Chen, R. O., Thomas, D., King, J., and Chiu, W. (1993). Three-dimensional structure transition from precursor to mature capsid in a bacterial virus. J. Mol. Biol. 231, 65-74.
50. Preston, V. G., Al-Kobaisi, M. F., McDougall, I. M., and Rixon, F. J.(1994). The herpes simplex virus gene UL26 proteinase in the presence of the UL 26.5 gene product promotes the formation of scaffold-like structures. J. Gen. Virol. 75, 2355-2366.
51. Preston, V. G., Coates, J. A., and Rixon, F. J. (1983). Identification and characterization of a herpes simplex virus gene product required for encapsidation of virus DNA. J. Virol. 45, 1056-1064.
52. Prevelige, P. E., Jr., Thomas, D., and King, J. (1993). Nucleation and growth phases in the polymerization of coat and scaffolding subunits into icosahedral procapsid shells. Biophys. J. 64, 824-835.
53. Prevelige, P., Thomas, D., and King, J. (1988). Scaffolding protein regulates the polymerization of P22 coat subunits into icosahedral shells in vitro. J. Mol. Biol. 202, 743-757.
54. Ray, P., and Murialdo, H. (1975). The role of gene Nu3 in bacteriophage lambda head morphogenesis. Virology 64, 247-263.
55. Sherman, G., and Bachenheimer, S. L. (1988). Characterization of intranuclear capsids made by ts morphogenetic mutants of HSV-1. Virology 163, 471-480.
56. Tatman, J. D., Preston, V. G., Nicholson, P., Elliott, R. M., and Rixon, F. J. (1994). Assembly of herpes simplex virus type 1 capsids using a panel of recombinant baculoviruses. J. Gen. Virol. 75, 1101-1113.
57. Thomas, D., and Prevelige, P. (1991). A pilot protein participates in the initiation of P22 procapsid assembly. Virology 182, 673-681.
58. Thomsen, D. R., Newcomb, W. W., Brown, J. C., and Homa, F. L. (1995). Assembly of the herpes simplex virus capsid: Requirement for the carboxyl-terminal twenty-five amino acids of the protein encoded by the UL26 and UL26.5 genes. J. Virol. 69, 3690-3703.
59. Thomsen, D. R., Roof, L. L., and Homa, F. L. (1994). Assembly of herpes simplex virus (HSV) intermediate capsids in insect cells infected with recombinant baculoviruses expressing HSV capsid proteins. J. Virol. 68, 2442-2457.
60. Traub, F., and Maeder, M. (1984). Formation of the prohead core of bacteriophage T4 in vivo. J. Virol. 49, 892-901.
61. van Driel, R., and Couture, E. (1978a). Assembly of bacteriophage T4 head-related structures. II. In vitro assembly of prehead-like structures. J. Mol. Biol. 123, 115-128.
62. van Driel, R., and Couture, E. (1978b). Assembly of the scaffolding core of bacteriophage T4 preheads. J. Mol. Biol. 123, 713-719.
63. Winston, F., Botstein, D., and Miller, J. H. (1979). Characterization of amber and ochre suppressors in Salmonella typhimurium. J. Bacteriol. 137, 433-439.