Identification of genes induced in response to low-temperature treatment in tea leaves

Plant Molecular Biology Reporter

Volumn 27, Issue 3, 2009, Pages 257-265

  Wang, Lei ^a   Li, Xianwen ^a   Zhao, Qin ^a   Jing, Shengli ^a   Chen, Shifeng ^a   Yuan, Hongyu ^a  

^a XINYANG NORMAL UNIVERSITY   (China)

Author keywords

Camellia sinensis; Cold acclimation; Gene expression

Indexed keywords

CAMELLIA SINENSIS;

EID: 70350028569     PISSN: 07359640     EISSN: 15729818     Source Type: Journal    
DOI: 10.1007/s11105-008-0079-7     Document Type: Article

References (43)

1. Baker SS, Wilhelm KS, Thomashow MF (1994) The 5′-region of Arabidopsis thaliana cor15a has cis-acting elements that confer cold-, drought- and ABA-regulated gene expression. Plant Mol Biol 24:701-713 doi:10.1007/BF00029852.
2. Ban Y, Honda C, Bessho H, Pang XM, Moriguchi T (2007) Suppression subtractive hybridization identifies genes induced in response to UV-B irradiation in apple skin: isolation of a putative UDP-glucose 4-epimerase. J Exp Bot 58:1825-1834 doi:10.1093/jxb/erm045.
3. Bassett CL, Wisniewski ME, Artlip TS, Norelli JL, Renaut J, Farrell RE Jr (2006) Global analysis of gene regulated by low temperature and photoperiod in peach bark. J Am Soc Hortic Sci 131:551-563.
4. Benedict C, Skinner JS, Meng R, Chang Y, Bhalerao R, Huner NPA, Finn CE, Chen THH, Hurry V (2006) The CBF1-dependent low temperature signalling pathway, regulon, and increase in freeze tolerance are conserved in Populus spp. Plant Cell Environ 29:1259-1272 doi:10.1111/j.1365-3040.2006.01505.x.
5. Champ KI, Febres VJ, Moore GA (2007) The role of CBF transcriptional activators in two Citrus species (poncirus and citrus) with contrasting levels of freezing tolerance. Physiol Plant 129:529-541 doi:10.1111/j.1399-3054.2006.00826.x.
6. Chinnusamy V, Ohta M, Kanrar S, Lee BH, Hong X, Agarwal M, Zhu JK (2003) ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis. Genes Dev 17:1043-1054 doi:10.1101/gad.1077503.
7. Christie PJ, Alfenito MR, Walbot V (1994) Impact of low-temperature stress on general phenylpropanoid and anthocyanin pathways: enhancement of transcript abundance and anthocyanin pigmentation in maize seedlings. Planta 194:541-549 doi:10.1007/BF00714468.
8. El Kayal W, Navarro M, Marque G, Keller G, Marque C, Teulieres C (2006) Expression profile of CBF-like transcriptional factor genes from Eucalyptus in response to cold. J Exp Bot 57:2455-2469 doi:10.1093/jxb/erl019.
9. Fowler S, Thomashow MF (2002) Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway. Plant Cell 14:1675-1690 doi:10.1105/tpc.003483.
10. Gilmour SJ, Zarka DG, Stockinger EJ, Salazar MP, Houghton JM, Thomashow MF (1998) Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression. Plant J 16:433-442 doi:10.1046/j.1365-313x.1998.00310.x.
11. Hisada S, Kita M, Endo-Inagaki T, Omura M, Moriguchi T (1999) Refinement of cDNA clone expression analysis in random sequencing from the rapid cell development phase of citrus fruit. J Plant Physiol 155:699-705.
12. Hong JP, Kim WT (2005) Isolation and functional characterization of the Ca-DREBLP1 gene encoding a dehydration-responsive element binding-factor-like protein 1 in hot pepper (Capsicum annuun L. cv. Pukang). Planta 220:875-888 doi:10.1007/s00425-004-1412-5.
13. Hutin C, Nussaume L, Moise N, Moya I, Kloppstech K, Havaux M (2003) Early light-induced proteins protect Arabidopsis from photooxidative stress. Proc Natl Acad Sci U S A 100:4921-4926 doi:10.1073/pnas.0736939100.
14. Kaplan F, Guy CL (2004) β-amylase induction and the protective role of maltose during temperature shock. Plant Physiol 135:1674-1684 doi:10.1104/pp.104.040808.
15. Kim JC, Lee SH, Cheong YH, Yoo CM, Lee SI, Chun HJ, Yun DJ, Hong JC, Lee SY, Lim CO, Cho MJ (2001) A novel cold-inducible zinc finger protein from soybean, SCOF-1, enhances cold tolerance in transgenic plants. Plant J 25:247-259 doi:10.1046/j.1365-313x.2001.00947.x.
16. Kim YH, Yang KS, Ryu SH, Kim KY, Song WK, Kwon SY, Lee HS, Bang JW, Kwak SS (2008) Molecular characterization of a cDNA encoding DRE-binding transcription factor from dehydration-treated fibrous roots of sweetpotato. Plant Physiol Biochem 46:196-204 doi:10.1016/j.plaphy.2007.09.012.
17. Kubo K, Sakamoto A, Kobayashi A, Rybka Z, Kanno Y, Nakagawa H, Nishino T, Takatsuji H (1998) Cys2/His2 zinc-finger protein family of petunia: evolution and general mechanism of target-sequence recognition. Nucleic Acids Res 26:608-615 doi:10.1093/nar/26.2.608.
18. Lee H, Guo Y, Ohta M, Xiong LM, Stevenson B, Zhu JK (2002) LOS2, a genetic locus required for cold-responsive gene transcription encodes a bi-functional enolase. EMBO J 21:2692-2702 doi:10.1093/emboj/21.11.2692.
19. Leyva A, Jarillo JA, Salinas J, Martinez-Zapater JM (1995) Low temperature induces the accumulation of phenylalanine ammonia-lyase and chalcone synthase mRNA of Arabidopsis thaliana in a light-dependent manner. Plant Physiol 108:39-46.
20. Li C, Puhakainen T, Welling A, Viherä-Aarnio A, Ernstsen A, Junttila O, Heino P, Palva ET (2002) Cold acclimation in silver birch (Betula pendula Roth): development of freezing tolerance in different tissues and climatic ecotypes. Physiol Plant 116:478-488 doi:10.1034/j.1399-3054.2002.1160406.x.
21. Liang YR, Ma WY, Lu JL, Wu Y (2001) Comparison of chemical compositions of Ilex latifolia Thumb and Camellia sinensis L. Food Chem 75:339-343 doi:10.1016/S0308-8146(01)00209-6.
22. Liu Q, Kasuga M, Sakura Y, Abe H, Miura S, Yamaguchi-Shinozaki K, Shinozaki K (1998) Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought- and low-temperature-responsive gene expression, respectively, in Arabidopsis. Plant Cell 10:1391-1406.
23. -ΔΔCT method. Methods 25:402-408 doi:10.1006/meth.2001.1262.
24. Mahajan S, Tuteja N (2005) Cold, salinity and drought stresses: an overview. Arch Biochem Biophys 444:139-158 doi:10.1016/j.abb.2005.10.018.
25. Montané MH, Dreyer S, Triantaphylides C, Kloppstech K (1997) Early light-induced proteins during long-term acclimation of barley to photooxidative stress caused by light and cold: high level of accumulation by posttranscriptional regulation. Planta 202:293-302 doi:10.1007/s004250050131.
26. Nogueira FTS, De Rosa VE, Menossi M, Ulian EC, Arruda P (2003) RNA expression profiles and data mining of sugarcane response to low temperature. Plant Physiol 132:1811-1824 doi:10.1104/pp.102.017483.
27. Oono Y, Seke M, Satou M, Iida K, Akiyama K, Sakurai T, Fujita M, Yamaguchi-Shinozaki K, Shinozaki K (2006) Monitoring expression profile of Arabidopsis genes during cold acclimation and deacclimation using microarrays. Funct Integr Genomics 6:212-234 doi:10.1007/s10142-005-0014-z.
28. Puhakainen T, Li C, Boije-Malm M, Kangasjärvi J, Heino P, Palva ET (2004) Short-day potentiation of low temperature-induced gene expression of a C-repeat-binding factor-controlled gene during cold acclimation in silver birch. Plant Physiol 136:4299-4307 doi:10.1104/pp.104.047258.
29. Seki M, Narusaka M, Abe H, Kasuga M, Yamaguchi-Shinozaki K, Carninci P, Hayashizaki Y, Shinozaki K (2001) Monitoring the expression pattern of 1300 Arabidopsis genes under drought and cold stresses by using a full-length cDNA microarray. Plant Cell 13:61-72.
30. Sterky F, Bhalerao RR, Unneberg P, Segerman B, Nilsson P, Brunner AM, Charbonnel-Campaa L, Lindvall JJ, Tandre K, Strauss SH, Sundberg B, Gustafsson P, Uhlén M, Bhalerao RP, Nilsson O, Sandberg G, Karlsson J, Lundeberg J, Jansson SA (2004) Populus EST resource for plant functional genomics. Proc Natl Acad Sci U S A 101:13951-13956 doi:10.1073/pnas.0401641101.
31. Stockinger EJ, Gilmour SJ, Thomashow MF (1997) Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulated transcription in response to low temperature and water deficit. Proc Natl Acad Sci U S A 94:1035-1040 doi:10.1073/pnas.94.3.1035.
32. Thomashow MF (1999) Plant cold acclimation: freezing tolerance genes and regulatory mechanisms. Annu Rev Plant Physiol Plant Mol Biol 50:571-599 doi:10.1146/annurev.arplant.50.1.571.
33. Ubi BE, Honda C, Bessho H, Kondo S, Wada M, Kobayashi S, Moriguchi T (2006) Expression analysis of anthocyanin biosynthetic genes in apple skin: effect of UV-B and temperature. Plant Sci 170:571-578 doi:10.1016/j.plantsci.2005.10.009.
34. Vogel JT, Zarka DG, van Buskirk HA, Fowler SG, Thomashow MF (2005) Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis. Plant J 41:195-211 doi:10.1111/j.1365-313X.2004.02288.x.
35. Wei H, Dhanaraj AL, Rowland LJ, Fu Y, Krebs SL, Arora R (2005) Comparative analysis of expressed sequence tags from cold-acclimated and non-acclimated leaves of Rhododendron catawbiense Michx. Planta 221:406-416 doi:10.1007/s00425-004-1440-1.
36. Weiser CJ (1970) Cold resistance and injury in woody plants. Science 1969:1269-1278.
37. Welling A, Palva ET (2008) Involvement of CBF transcription factors in winter hardiness in birch. Plant Physiol 147:1199-1211 doi:10.1104/pp.108.117812.
38. Welling A, Rinne P, Vihera-Aarnio A, Kontunen-Soppela S, Heino P, Palva ET (2004) Photoperiod and temperature differentially regulate the expression of two dehydrin genes during overwintering of birch (Betula pendula Ehrh). J Exp Bot 55:507-516 doi:10.1093/jxb/erh045.
39. Winkel-Shirley B (2002) Biosynthesis of flavonoids and effects of stress. Curr Opin Plant Biol 5:218-223 doi:10.1016/S1369-5266(02)00256-X.
40. Wisniewski M, Bassett C, Renaut J, Farrell R, Tworkoski T, Artlip T (2006) Differential regulation of two dehydrin genes from peach (Prunus persica L. Batsch) by photoperiod, low temperature, and water deficit. Tree Physiol 26:575-584.
41. Wisniewski M, Bassett C, Norelli J, Macarisin D, Artlip T, Gasic K, Korban S (2008) Expressed sequence tag analysis of the response of apple (Malus × domestica 'Royal Gala') to low temperature and water deficit. Physiol Plant 133:298-317 doi:10.1111/j.1399-3054.2008.01063.x.
42. Yamaguchi-Shinozaki K, Shinozaki K (1994) A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress. Plant Cell 6:251-264.
43. Zhang X, Fowler SG, Cheng H, Lou Y, Rhee SY, Stockinger EJ, Thomashow MF (2004) Freezing-sensitive tomato has a functional CBF cold response pathway, but a CBF regulon that differs from that of freezing-tolerant Arabidopsis. Plant J 39:905-919 doi:10.1111/j.1365-313X.2004.02176.x.